| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784634
Identifier: 91784634
GI number: 91784634
Start: 3624752
End: 3625954
Strand: Reverse
Name: 91784634
Synonym: Bxe_A1160
Alternate gene names: NA
Gene position: 3625954-3624752 (Counterclockwise)
Preceding gene: 91784635
Following gene: 91784629
Centisome position: 74.06
GC content: 64.01
Gene sequence:
>1203_bases GTGGCACATACTAGGCCCGCCATGAGCGCCGAGAAGACGGCGCTCGTTCTGTCCGGTGGCGGTGCACGCGCTGCCTACCA GGTTGGCGTGTTGCAGGGTCTGGTGAGATTGCGCCGCGAACGTCTGGGCGACGGGGCTCCGAACCCATTCGGCATCCTAT GCGGTACTTCGGCAGGTGCAATCAATGCCGCCGCTTTAGCCTGCCGGGCAGACTCCTTTGATGCGGGCGTGGAGACAATC GCCGCAGTTTGGCGAAACTTTCGCGCTGATCAGGTGTATCGCACCGATGCGCTTGGTATCGCCCGCAGCGGTGCACAGTG GCTGAGCGCGATTTCGGTAGGCTGGATGTTGGCGCGCTGGCGCAAAGAAGGGCCACGTTCGCTGCTGGACAATGAACCTT TGGCCGAACTGCTGCGACATTGGGCGCCGCTGGAACTGCTACCGCGCATGCTGGCCGAGCGTCATCTGCACGCGCTGGCG CTAGGCGCGTCCAGCTACACCAGCGGCGAACACCTCACCTTCTTTGAGGCCACCGGCGACATGACGGGCTATGAACGCTC GCAGCGGCTGGCCGTACCCATGCGACTGGGGCTGGAGCACCTGCTCGCTTCGGCGGCGATCCCCTTCGTATTTCCAGCAC AGCGTATCGAGCATGCGGAGCACGCCGGCTGGTACGGCGACGGCTCGATGCGGCAAACCTCACCGATCTCGCCGGCGATC CATCTCGGTGCGCAGCGTATGCTCATCGTTGGTGCCGGTCGGCTGCATGAACCGCGTGGGCGAATCGTGCGTGATGGCGG TTACCCGACACTGGCTCAAGTTGGTGGGCACGTGCTGTCGAACGTCTTTCTCGATTCGCTCGCGGTGGACATCGAGCGTA TGGAGCGCGTCAACCGTACCCTGGAAATGATGACGCTGGGGCAGCGCCTGGCCACCTCACTGCGGTCGGTGAAGGCGCTG GTGATCGCGCCAAGCGAGCGCATTGACGACATCGCGGCTCGGCACCAGAAGTACCTGCCGCGAACGGTGCGCGCGCTGTT GCGCGGCGTGGGTTCGTCCAGCGCGAGCAGTGACCTGAGCGGTTCCGCTCTGGCGAGCTACCTGTTGTTCGAGGCTCCTT TCACCCAGGAGGTAATGGCGCTGGGTGAGCGCGACACGTTGGCACAACGGCAGGCAGTCTGTGATTTCTTCGGGTGGCTT TGA
Upstream 100 bases:
>100_bases CGAATGCCGGCATCAAGAAACCCAATCCGGGTGAGAACTTTATGTCCTTGCGCTTCTCTCTCCCGTGGTGAAGGCGGCCG GGCATACTCGGGTGCCTGCG
Downstream 100 bases:
>100_bases GGCGTGCGCTTCACCCCCAAGCCGAGGCACTTCCAGGAAAGGCGTTGGCAGACCATTCGCGCAGTGGAACGCACCCCATA TGGCGCTTCGAGGGCAAGGG
Product: alpha-beta hydrolase family esterase
Products: NA
Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MAHTRPAMSAEKTALVLSGGGARAAYQVGVLQGLVRLRRERLGDGAPNPFGILCGTSAGAINAAALACRADSFDAGVETI AAVWRNFRADQVYRTDALGIARSGAQWLSAISVGWMLARWRKEGPRSLLDNEPLAELLRHWAPLELLPRMLAERHLHALA LGASSYTSGEHLTFFEATGDMTGYERSQRLAVPMRLGLEHLLASAAIPFVFPAQRIEHAEHAGWYGDGSMRQTSPISPAI HLGAQRMLIVGAGRLHEPRGRIVRDGGYPTLAQVGGHVLSNVFLDSLAVDIERMERVNRTLEMMTLGQRLATSLRSVKAL VIAPSERIDDIAARHQKYLPRTVRALLRGVGSSSASSDLSGSALASYLLFEAPFTQEVMALGERDTLAQRQAVCDFFGWL
Sequences:
>Translated_400_residues MAHTRPAMSAEKTALVLSGGGARAAYQVGVLQGLVRLRRERLGDGAPNPFGILCGTSAGAINAAALACRADSFDAGVETI AAVWRNFRADQVYRTDALGIARSGAQWLSAISVGWMLARWRKEGPRSLLDNEPLAELLRHWAPLELLPRMLAERHLHALA LGASSYTSGEHLTFFEATGDMTGYERSQRLAVPMRLGLEHLLASAAIPFVFPAQRIEHAEHAGWYGDGSMRQTSPISPAI HLGAQRMLIVGAGRLHEPRGRIVRDGGYPTLAQVGGHVLSNVFLDSLAVDIERMERVNRTLEMMTLGQRLATSLRSVKAL VIAPSERIDDIAARHQKYLPRTVRALLRGVGSSSASSDLSGSALASYLLFEAPFTQEVMALGERDTLAQRQAVCDFFGWL >Mature_399_residues AHTRPAMSAEKTALVLSGGGARAAYQVGVLQGLVRLRRERLGDGAPNPFGILCGTSAGAINAAALACRADSFDAGVETIA AVWRNFRADQVYRTDALGIARSGAQWLSAISVGWMLARWRKEGPRSLLDNEPLAELLRHWAPLELLPRMLAERHLHALAL GASSYTSGEHLTFFEATGDMTGYERSQRLAVPMRLGLEHLLASAAIPFVFPAQRIEHAEHAGWYGDGSMRQTSPISPAIH LGAQRMLIVGAGRLHEPRGRIVRDGGYPTLAQVGGHVLSNVFLDSLAVDIERMERVNRTLEMMTLGQRLATSLRSVKALV IAPSERIDDIAARHQKYLPRTVRALLRGVGSSSASSDLSGSALASYLLFEAPFTQEVMALGERDTLAQRQAVCDFFGWL
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43422; Mature: 43291
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTRPAMSAEKTALVLSGGGARAAYQVGVLQGLVRLRRERLGDGAPNPFGILCGTSAGA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC INAAALACRADSFDAGVETIAAVWRNFRADQVYRTDALGIARSGAQWLSAISVGWMLARW HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEGPRSLLDNEPLAELLRHWAPLELLPRMLAERHLHALALGASSYTSGEHLTFFEATGD HHCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC MTGYERSQRLAVPMRLGLEHLLASAAIPFVFPAQRIEHAEHAGWYGDGSMRQTSPISPAI CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH HLGAQRMLIVGAGRLHEPRGRIVRDGGYPTLAQVGGHVLSNVFLDSLAVDIERMERVNRT HHCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEMMTLGQRLATSLRSVKALVIAPSERIDDIAARHQKYLPRTVRALLRGVGSSSASSDLS HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC GSALASYLLFEAPFTQEVMALGERDTLAQRQAVCDFFGWL HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHTRPAMSAEKTALVLSGGGARAAYQVGVLQGLVRLRRERLGDGAPNPFGILCGTSAGA CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC INAAALACRADSFDAGVETIAAVWRNFRADQVYRTDALGIARSGAQWLSAISVGWMLARW HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEGPRSLLDNEPLAELLRHWAPLELLPRMLAERHLHALALGASSYTSGEHLTFFEATGD HHCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC MTGYERSQRLAVPMRLGLEHLLASAAIPFVFPAQRIEHAEHAGWYGDGSMRQTSPISPAI CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH HLGAQRMLIVGAGRLHEPRGRIVRDGGYPTLAQVGGHVLSNVFLDSLAVDIERMERVNRT HHCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEMMTLGQRLATSLRSVKALVIAPSERIDDIAARHQKYLPRTVRALLRGVGSSSASSDLS HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC GSALASYLLFEAPFTQEVMALGERDTLAQRQAVCDFFGWL HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA