Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ybaP [C]

Identifier: 91784563

GI number: 91784563

Start: 3554267

End: 3555178

Strand: Reverse

Name: ybaP [C]

Synonym: Bxe_A1236

Alternate gene names: 91784563

Gene position: 3555178-3554267 (Counterclockwise)

Preceding gene: 91784564

Following gene: 91784562

Centisome position: 72.62

GC content: 67.21

Gene sequence:

>912_bases
TTGAGCGCATTTGCACGTGGCGTTGACGCACAGCCTCGGGTGGGACTATGGTGGGCTCGCGCCCGTCACCGCGCGCACGC
GCGGCACCTCAATTGTTCGATTGAGCAGCGCGCCTGCTTTTCTGTGTCATTGCCTGTCCACCCCCGAGGTTGCATGTACC
TACAACTCACCGGCACTCACGTTCGCGTGCTTGGCTCGATGCATCTCTTTCCCGCGACCAGTCGCAGAACGCCGCCGTGG
ATCGCTGAAGCGTATGACTGGGCCGAAGCGCTCGTCTTCGAGTCCGATCCGCCGACGATTCTCCCGTTGCTGAAGGCCGC
CGGGCAAGACGGCGCCGCCCGGTTGCAGCCGCTGCTATCCGCCGACGCATGGCAGCAGCTTCAAGCCGCGTGGCCTGTTG
AAGGCCCGCTGGCGCCGCTCGTCGATCTGCGTCCGTGGGCCGCGCTGATCGTCGCGCCGACGCTGTTCCAGCACGTCGTC
GAAGGTGTCGAGCCGCGCATGTTGCGCTCGGCGATCGCGCAGGCCAAACCGTATCGGTATCTCGAGACCGCGCAGGAGGT
GGCGGCGGCGCTCGATTCGATCCCGCTCGATGCGCTCGGCGCAGCGCTCGGCCTGCTGATGGCCGATCTCGACGAACCGC
AGCGCACGCTCGAGCGCATGCATGCGGCCTGGCTGGAAGGCGATCTGCCCGCCGTGCACCGCATCGCCGTCGAATCGCCG
ATGTTCAATCTGCCCGGCATCCGGCACGCGATTCTCGACGCGCGCAATCGCGCCTGGGCCGCGCGCCTGGCCGAGTGGCT
CACACGGCCGGAACGCACGTTGGTGGTCGTCGGCGCGCTGCATTTGTGCGGACCCGGCAACCTGATCGAATGTCTCGCGC
GGCCCGTCGAGCCGGTCTTTGCCCATCCATGA

Upstream 100 bases:

>100_bases
TCTGCGCCAGAAAAGCCCCATTGTTTGGGGCTTTATTTTTTATTAGACCCTGGTTGGAGATGTCCATGCGGGACATTGTC
CGCGCGCTGGCCGCGGCCGC

Downstream 100 bases:

>100_bases
CAGGCGCGTCGCAGCGCGGTCGGAAACGGGTCGTGTGCGGCATAATCTCGCATCACCGCGGTGTGTGCGGTGCGCTCCTT
TCTATAGAAAAACGTTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: GumN Protein; Gumn Family Protein; GumN Protein Superfamily

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSAFARGVDAQPRVGLWWARARHRAHARHLNCSIEQRACFSVSLPVHPRGCMYLQLTGTHVRVLGSMHLFPATSRRTPPW
IAEAYDWAEALVFESDPPTILPLLKAAGQDGAARLQPLLSADAWQQLQAAWPVEGPLAPLVDLRPWAALIVAPTLFQHVV
EGVEPRMLRSAIAQAKPYRYLETAQEVAAALDSIPLDALGAALGLLMADLDEPQRTLERMHAAWLEGDLPAVHRIAVESP
MFNLPGIRHAILDARNRAWAARLAEWLTRPERTLVVVGALHLCGPGNLIECLARPVEPVFAHP

Sequences:

>Translated_303_residues
MSAFARGVDAQPRVGLWWARARHRAHARHLNCSIEQRACFSVSLPVHPRGCMYLQLTGTHVRVLGSMHLFPATSRRTPPW
IAEAYDWAEALVFESDPPTILPLLKAAGQDGAARLQPLLSADAWQQLQAAWPVEGPLAPLVDLRPWAALIVAPTLFQHVV
EGVEPRMLRSAIAQAKPYRYLETAQEVAAALDSIPLDALGAALGLLMADLDEPQRTLERMHAAWLEGDLPAVHRIAVESP
MFNLPGIRHAILDARNRAWAARLAEWLTRPERTLVVVGALHLCGPGNLIECLARPVEPVFAHP
>Mature_302_residues
SAFARGVDAQPRVGLWWARARHRAHARHLNCSIEQRACFSVSLPVHPRGCMYLQLTGTHVRVLGSMHLFPATSRRTPPWI
AEAYDWAEALVFESDPPTILPLLKAAGQDGAARLQPLLSADAWQQLQAAWPVEGPLAPLVDLRPWAALIVAPTLFQHVVE
GVEPRMLRSAIAQAKPYRYLETAQEVAAALDSIPLDALGAALGLLMADLDEPQRTLERMHAAWLEGDLPAVHRIAVESPM
FNLPGIRHAILDARNRAWAARLAEWLTRPERTLVVVGALHLCGPGNLIECLARPVEPVFAHP

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33370; Mature: 33239

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFARGVDAQPRVGLWWARARHRAHARHLNCSIEQRACFSVSLPVHPRGCMYLQLTGTH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCE
VRVLGSMHLFPATSRRTPPWIAEAYDWAEALVFESDPPTILPLLKAAGQDGAARLQPLLS
EEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCHHHHHHHHH
ADAWQQLQAAWPVEGPLAPLVDLRPWAALIVAPTLFQHVVEGVEPRMLRSAIAQAKPYRY
HHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
LETAQEVAAALDSIPLDALGAALGLLMADLDEPQRTLERMHAAWLEGDLPAVHRIAVESP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
MFNLPGIRHAILDARNRAWAARLAEWLTRPERTLVVVGALHLCGPGNLIECLARPVEPVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHCCCCHHC
AHP
CCC
>Mature Secondary Structure 
SAFARGVDAQPRVGLWWARARHRAHARHLNCSIEQRACFSVSLPVHPRGCMYLQLTGTH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCE
VRVLGSMHLFPATSRRTPPWIAEAYDWAEALVFESDPPTILPLLKAAGQDGAARLQPLLS
EEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCHHHHHHHHH
ADAWQQLQAAWPVEGPLAPLVDLRPWAALIVAPTLFQHVVEGVEPRMLRSAIAQAKPYRY
HHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
LETAQEVAAALDSIPLDALGAALGLLMADLDEPQRTLERMHAAWLEGDLPAVHRIAVESP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
MFNLPGIRHAILDARNRAWAARLAEWLTRPERTLVVVGALHLCGPGNLIECLARPVEPVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHCCCCHHC
AHP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA