| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is dhaT [H]
Identifier: 91784483
GI number: 91784483
Start: 3471176
End: 3472324
Strand: Reverse
Name: dhaT [H]
Synonym: Bxe_A1316
Alternate gene names: 91784483
Gene position: 3472324-3471176 (Counterclockwise)
Preceding gene: 91784484
Following gene: 91784482
Centisome position: 70.92
GC content: 66.49
Gene sequence:
>1149_bases ATGGCCTATATTTTCTATCTGACCCATATCCATCTCGGCTACGACGCGCTGTCGCAGCTATCGTCCGAATGCGGACGTGT CGGCATCAAGCGGCCTTTGATCATCACCGACAAGGGCGTCGTCGCGGCCGGCCTCGCGCAGCGCGCGCTAGACGCGCTGA AATCCGGCGCCGTGCCGGTCTTCGACGACACGCCTTCGAACCCGACCGAGGCGATGGTGCTCGCCGCCGCCCAGGCGTAC CGCGGCGAAGGCTGCGACGGTCTGATCGCGGTGGGCGGCGGGTCGTCGATCGATCTGGCCAAGGGCGTAGCGATCGCGGC CACGCATGCCGGTGCGCTGACGCAGTACGCGACCATCGAAGGCGGCAGCCCGAAGATCACGGCCGCGGCCGCGCCGCTGA TCGCCGTTCCCACCACGGCGGGCACGGGCAGCGAAGTCGCTCGCGGCGCGATCGTGATCCTGAACGACGGCCGCAAGCTC GGCTTTCATTCGTGGCACCTGCTGCCCAAGTCGGCGTTATGCGATCCGGCGCTCACGCTCGGCCTGCCGCCGGGTTTGAC GGCGGCCACCGGCATGGACGCAATCGCGCACTGCATCGAGACTTTTCTCGCGCCGGCCTTCAATCCGCCCGCGGACGGCA TCGCGCTGGACGGGTTGGAGCGCGCGTGGGCCAACATCGAACGCGCGACGGCGGACGGCAGCGATCGCGACGCGCGTCTG AACATGATGAGCGCCTCGATGCAAGGCGCGATGGCGTTCCAGAAAGGGCTTGGCTGTGTGCATTCGCTGTCGCATCCGCT GGGCGGCTTGACGGTGAACGGCAAAACGTCGCTGCATCACGGCACGCTGAACGCGGTTGTGTTGCCCGCGGTGCTGCGCT TCAACGAGACAGCGGACAGCGTGGTGGCTGAGCGCCGTTATGCAAGAATGCGCCGCGTAATGACTTTGCCGGACAACGCG GATCTCGCGCAGGCACTGTTCGACATGACCGCGCGGCTCGGCTTGCCGACCGGTCTCAGGCAGATGGGCGTCGACGAAAG CATGTTCGACAAGGTGATCCAGGGCGCGCTCGCCGATCATTGTCACCGCACGAATCCACGCGAAGCCACCGCCGACGACT ACCGCCGCATGCTGACCGAATCGCTCTGA
Upstream 100 bases:
>100_bases GGCGCGGCTTGCCGTTCGAGTTTGTCGAGAGGCCGGGACAGTAGCAGACCAGACAGACCAATCAGCAGGGCGACGAGCTT GCGCTCGGGAGGAGCACGGC
Downstream 100 bases:
>100_bases AGCAAGCGAGAGCCGCGCAACGCGCACGACAACTTCAAACGGACTCACGCCAGGCATGAACAAACCCGCACCCGCTTCGC GCACCGCTTATCCGCATTTC
Product: putative iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAYIFYLTHIHLGYDALSQLSSECGRVGIKRPLIITDKGVVAAGLAQRALDALKSGAVPVFDDTPSNPTEAMVLAAAQAY RGEGCDGLIAVGGGSSIDLAKGVAIAATHAGALTQYATIEGGSPKITAAAAPLIAVPTTAGTGSEVARGAIVILNDGRKL GFHSWHLLPKSALCDPALTLGLPPGLTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATADGSDRDARL NMMSASMQGAMAFQKGLGCVHSLSHPLGGLTVNGKTSLHHGTLNAVVLPAVLRFNETADSVVAERRYARMRRVMTLPDNA DLAQALFDMTARLGLPTGLRQMGVDESMFDKVIQGALADHCHRTNPREATADDYRRMLTESL
Sequences:
>Translated_382_residues MAYIFYLTHIHLGYDALSQLSSECGRVGIKRPLIITDKGVVAAGLAQRALDALKSGAVPVFDDTPSNPTEAMVLAAAQAY RGEGCDGLIAVGGGSSIDLAKGVAIAATHAGALTQYATIEGGSPKITAAAAPLIAVPTTAGTGSEVARGAIVILNDGRKL GFHSWHLLPKSALCDPALTLGLPPGLTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATADGSDRDARL NMMSASMQGAMAFQKGLGCVHSLSHPLGGLTVNGKTSLHHGTLNAVVLPAVLRFNETADSVVAERRYARMRRVMTLPDNA DLAQALFDMTARLGLPTGLRQMGVDESMFDKVIQGALADHCHRTNPREATADDYRRMLTESL >Mature_381_residues AYIFYLTHIHLGYDALSQLSSECGRVGIKRPLIITDKGVVAAGLAQRALDALKSGAVPVFDDTPSNPTEAMVLAAAQAYR GEGCDGLIAVGGGSSIDLAKGVAIAATHAGALTQYATIEGGSPKITAAAAPLIAVPTTAGTGSEVARGAIVILNDGRKLG FHSWHLLPKSALCDPALTLGLPPGLTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATADGSDRDARLN MMSASMQGAMAFQKGLGCVHSLSHPLGGLTVNGKTSLHHGTLNAVVLPAVLRFNETADSVVAERRYARMRRVMTLPDNAD LAQALFDMTARLGLPTGLRQMGVDESMFDKVIQGALADHCHRTNPREATADDYRRMLTESL
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=399, Percent_Identity=27.0676691729323, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI48994951, Length=384, Percent_Identity=34.1145833333333, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1789163, Length=374, Percent_Identity=32.0855614973262, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI87082107, Length=366, Percent_Identity=33.0601092896175, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1787493, Length=390, Percent_Identity=30.5128205128205, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789386, Length=321, Percent_Identity=30.2180685358255, Blast_Score=104, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17537053, Length=387, Percent_Identity=28.1653746770026, Blast_Score=108, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321181, Length=376, Percent_Identity=34.0425531914894, Blast_Score=196, Evalue=7e-51, Organism=Drosophila melanogaster, GI24657991, Length=425, Percent_Identity=28, Blast_Score=111, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 39913; Mature: 39782
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYIFYLTHIHLGYDALSQLSSECGRVGIKRPLIITDKGVVAAGLAQRALDALKSGAVPV CEEEEEEEHHHHCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEE FDDTPSNPTEAMVLAAAQAYRGEGCDGLIAVGGGSSIDLAKGVAIAATHAGALTQYATIE ECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCEEEEEECCCHHHEEEEEC GGSPKITAAAAPLIAVPTTAGTGSEVARGAIVILNDGRKLGFHSWHLLPKSALCDPALTL CCCCEEEEECCCEEEECCCCCCCHHHHCCEEEEEECCCEECCCCEECCCHHHHCCCHHHC GLPPGLTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATADGSDRDARL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHH NMMSASMQGAMAFQKGLGCVHSLSHPLGGLTVNGKTSLHHGTLNAVVLPAVLRFNETADS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHH VVAERRYARMRRVMTLPDNADLAQALFDMTARLGLPTGLRQMGVDESMFDKVIQGALADH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHH CHRTNPREATADDYRRMLTESL HHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AYIFYLTHIHLGYDALSQLSSECGRVGIKRPLIITDKGVVAAGLAQRALDALKSGAVPV EEEEEEEHHHHCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEE FDDTPSNPTEAMVLAAAQAYRGEGCDGLIAVGGGSSIDLAKGVAIAATHAGALTQYATIE ECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCEEEEEECCCHHHEEEEEC GGSPKITAAAAPLIAVPTTAGTGSEVARGAIVILNDGRKLGFHSWHLLPKSALCDPALTL CCCCEEEEECCCEEEECCCCCCCHHHHCCEEEEEECCCEECCCCEECCCHHHHCCCHHHC GLPPGLTAATGMDAIAHCIETFLAPAFNPPADGIALDGLERAWANIERATADGSDRDARL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHH NMMSASMQGAMAFQKGLGCVHSLSHPLGGLTVNGKTSLHHGTLNAVVLPAVLRFNETADS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHHHH VVAERRYARMRRVMTLPDNADLAQALFDMTARLGLPTGLRQMGVDESMFDKVIQGALADH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHH CHRTNPREATADDYRRMLTESL HHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]