| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784341
Identifier: 91784341
GI number: 91784341
Start: 3304782
End: 3305354
Strand: Reverse
Name: 91784341
Synonym: Bxe_A1459
Alternate gene names: NA
Gene position: 3305354-3304782 (Counterclockwise)
Preceding gene: 91784342
Following gene: 91784340
Centisome position: 67.51
GC content: 59.69
Gene sequence:
>573_bases ATGTCGAAGCTACCTGGCGCCCAGGGCGCGGCCACTCAATCCAGTGATCCGTTCGTGATAGACCTGAAAAAGATCCGCGA AGACGCGCGCAAGCACATGTCGGACGGCTCGGTCACGCAAAGCTACGGCGCGGATCGCGAGACGGTGCTGAAGCTGTGCA ACGACGCACTCGCCACCGAAATCGTCTGTGTGCTGCGTTACAAGCGGCATCACTTCATGGCCAAGGGCATCAACTCCGAG GCGGTGGCCGCGGAGTTCGCCGAACATGCAGCGGAAGAGCAGGAACATGCCGACAGCATTGCCGAGCGCATCGTGCAACT GGGCGGCGAGCCGGATTTCGCGCCGGACGGTTTGAAAACGCGTTCGCATTCGGAATACAAGGAGGGCAGCAACCTCACGG ACATGATCAAGGAGAACCTGATCGCCGAGCGCATTGCGATCGACACGTATCGCGAGATCATCCGCTATCTCGGCGATAAG GACGTGACGACCCGCCGTATGTTCGAAGACATTCTGGCAGTCGAAGAAGAGCACGCAGACGACATGGCGGATCTGCTCGA AGGCCGCGAGTAA
Upstream 100 bases:
>100_bases GCATTGCCAGCAGCCATTCCTTGTATTCCTTGCGCCGGCGCATCAGGCGCGATTCGTGCGTGATGCGCAATTCCCCCATA CCGGATAAAGGAGAAATTCA
Downstream 100 bases:
>100_bases GCGGGGGCGGCGCAACGGGCGCGGGTGGATCGGGCGGGTTTCCCGCGCCGCCATGCGCCGCCGGGTTTTGCGATTCCGGC AGAAGCCAGACCGGAGGTCA
Product: bacterioferritin
Products: NA
Alternate protein names: Ferritin Dps Family Protein; Ferritin And Dps; Ferritin-Like Domain Subfamily; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSKLPGAQGAATQSSDPFVIDLKKIREDARKHMSDGSVTQSYGADRETVLKLCNDALATEIVCVLRYKRHHFMAKGINSE AVAAEFAEHAAEEQEHADSIAERIVQLGGEPDFAPDGLKTRSHSEYKEGSNLTDMIKENLIAERIAIDTYREIIRYLGDK DVTTRRMFEDILAVEEEHADDMADLLEGRE
Sequences:
>Translated_190_residues MSKLPGAQGAATQSSDPFVIDLKKIREDARKHMSDGSVTQSYGADRETVLKLCNDALATEIVCVLRYKRHHFMAKGINSE AVAAEFAEHAAEEQEHADSIAERIVQLGGEPDFAPDGLKTRSHSEYKEGSNLTDMIKENLIAERIAIDTYREIIRYLGDK DVTTRRMFEDILAVEEEHADDMADLLEGRE >Mature_189_residues SKLPGAQGAATQSSDPFVIDLKKIREDARKHMSDGSVTQSYGADRETVLKLCNDALATEIVCVLRYKRHHFMAKGINSEA VAAEFAEHAAEEQEHADSIAERIVQLGGEPDFAPDGLKTRSHSEYKEGSNLTDMIKENLIAERIAIDTYREIIRYLGDKD VTTRRMFEDILAVEEEHADDMADLLEGRE
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21253; Mature: 21122
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPGAQGAATQSSDPFVIDLKKIREDARKHMSDGSVTQSYGADRETVLKLCNDALATE CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH IVCVLRYKRHHFMAKGINSEAVAAEFAEHAAEEQEHADSIAERIVQLGGEPDFAPDGLKT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RSHSEYKEGSNLTDMIKENLIAERIAIDTYREIIRYLGDKDVTTRRMFEDILAVEEEHAD CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DMADLLEGRE HHHHHHCCCC >Mature Secondary Structure SKLPGAQGAATQSSDPFVIDLKKIREDARKHMSDGSVTQSYGADRETVLKLCNDALATE CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHH IVCVLRYKRHHFMAKGINSEAVAAEFAEHAAEEQEHADSIAERIVQLGGEPDFAPDGLKT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RSHSEYKEGSNLTDMIKENLIAERIAIDTYREIIRYLGDKDVTTRRMFEDILAVEEEHAD CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DMADLLEGRE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA