| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is ygjP [H]
Identifier: 91784315
GI number: 91784315
Start: 3276660
End: 3277163
Strand: Reverse
Name: ygjP [H]
Synonym: Bxe_A1485
Alternate gene names: 91784315
Gene position: 3277163-3276660 (Counterclockwise)
Preceding gene: 91784316
Following gene: 91784313
Centisome position: 66.94
GC content: 55.95
Gene sequence:
>504_bases ATGTCCCATCTGAAATACCTCACCGGCTACCCAGCCGCGCTACAGGAGAAGGTCAGGAAACTGATCGCCGAAGACCAGCT CGACGCGTATCTCGCCGCGCGCTATCCGAATACGCATGACGTACAGACAGATCGGGCGCTTTACGCCTATTGCGCCGACC TTAAACGCGAACATTTGCGCAGCGCGGAGCAGATCGACAAGGTCACCTACGACAGCAAACTGGACGTGGTGCGCCATGCG CTAGGCCTGCACACGAGCATTTCCCGCGTGCAGGGCGGCAGGCTGAAGGCGAAGAAAGAAATCCGCATCGCGTCGCTGTT CAAATCGGCCGCGCCGGAATTTCTGAAAATGATCGTGGTGCACGAACTCGCTCATTTGAAGGAAAGCGACCACAACAAGG CTTTCTATCGCCTCTGTGAGTTCATGCAACCGGGTTACCACCAGATCGAATTCGATCTGCGTCTTTACCTGACGCAGCGC GAATTGGAGAAGAAACAGACCTGA
Upstream 100 bases:
>100_bases TGGCTGGACGCGCAATATCCCGACCATCGCGATCCGCTGCGCTATTGGGACGATTGCGAAGAAAATCGCCGCGCCGTTTG ACGGAGCGTGGACCCGGATC
Downstream 100 bases:
>100_bases CGATCCAGCGTCAGGTCTCGGGCCTCAGGCGGCAACCGCCTCGACCGCGGAAGCCGTCAACAACACCGGGATCGACTTCG AGGTCGGCGTTCCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSHLKYLTGYPAALQEKVRKLIAEDQLDAYLAARYPNTHDVQTDRALYAYCADLKREHLRSAEQIDKVTYDSKLDVVRHA LGLHTSISRVQGGRLKAKKEIRIASLFKSAAPEFLKMIVVHELAHLKESDHNKAFYRLCEFMQPGYHQIEFDLRLYLTQR ELEKKQT
Sequences:
>Translated_167_residues MSHLKYLTGYPAALQEKVRKLIAEDQLDAYLAARYPNTHDVQTDRALYAYCADLKREHLRSAEQIDKVTYDSKLDVVRHA LGLHTSISRVQGGRLKAKKEIRIASLFKSAAPEFLKMIVVHELAHLKESDHNKAFYRLCEFMQPGYHQIEFDLRLYLTQR ELEKKQT >Mature_166_residues SHLKYLTGYPAALQEKVRKLIAEDQLDAYLAARYPNTHDVQTDRALYAYCADLKREHLRSAEQIDKVTYDSKLDVVRHAL GLHTSISRVQGGRLKAKKEIRIASLFKSAAPEFLKMIVVHELAHLKESDHNKAFYRLCEFMQPGYHQIEFDLRLYLTQRE LEKKQT
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=162, Percent_Identity=61.1111111111111, Blast_Score=209, Evalue=7e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 19460; Mature: 19328
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLKYLTGYPAALQEKVRKLIAEDQLDAYLAARYPNTHDVQTDRALYAYCADLKREHLR CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SAEQIDKVTYDSKLDVVRHALGLHTSISRVQGGRLKAKKEIRIASLFKSAAPEFLKMIVV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HELAHLKESDHNKAFYRLCEFMQPGYHQIEFDLRLYLTQRELEKKQT HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHLKYLTGYPAALQEKVRKLIAEDQLDAYLAARYPNTHDVQTDRALYAYCADLKREHLR CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH SAEQIDKVTYDSKLDVVRHALGLHTSISRVQGGRLKAKKEIRIASLFKSAAPEFLKMIVV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HELAHLKESDHNKAFYRLCEFMQPGYHQIEFDLRLYLTQRELEKKQT HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]