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The map label for this gene is yecS [C]

Identifier: 91784299

GI number: 91784299

Start: 3259538

End: 3260194

Strand: Reverse

Name: yecS [C]

Synonym: Bxe_A1501

Alternate gene names: 91784299

Gene position: 3260194-3259538 (Counterclockwise)

Preceding gene: 91784300

Following gene: 91784298

Centisome position: 66.59

GC content: 61.64

Gene sequence:

>657_bases
ATGTTCTTCCAGAACGCCATCGAGTTTCTGCCGATCCTGCTCAAAGGCGCGGTTGTCACGATCGAGATCACCTTCTGCTC
GTTCGTTCTGAGCACGGCGCTCGGCCTCGTGCTCGCGTTGATGCGCGTGTCCGGCAACCGCGTCGTATCGAACGCTGCCG
CGACTTTCATCAACGTGATCCGCGGGCTGCCCATCATCGTTCAGCTCTTCTACATCTACTTCGTGCTGCCGGATCTCGGC
GTGCAGTTGTCGGCGTTCCAGGCCGGTTCCATTGGTCTCGGCGTCGCGTACTCGGTGTATCAGGCGGAAAACTTTCGCGC
GGGCATCCAGGCGATCGATCACGGGCAGATCGAAGCGGCGCAGTCCATCGGCATGCGCGGCGCGATGATCATGCGCCGCG
TGGTGTTGCCGCAGGCGTTCCGGATCTCACTGCCGGCGTACGGCAATACGCTCGTGATGATGCTCAAGGACTCGTCGCTC
GCATCGACCATCACCGTCGCCGAGATGACGCGCGCCGGACAGCTCATCGCGTCGTCCACGTTCCAGAACATGACGGTCTT
CACGCTGGTCGCGCTGCTTTACCTCGGGCTCAGCCTGCCGCTCGTCTATGGATTGCGGCGGATCGAACGCCGCCTCGGAT
TGAAGGGAAAACGATGA

Upstream 100 bases:

>100_bases
ACGCCGGCATCAGAAAGATCAAGGCCGACGGTACGCTCACGCAGATCATCAAGAAGTGGCAGGTGGAATGACGTTGTTTT
CCGAATAAGGACGCTCCGCC

Downstream 100 bases:

>100_bases
TCAAGGTCGACGCGATTCACAAGCGCTTTCACGATCAGCACGTGCTGAAAGGCGTCAGTCTGAATGTCGAACGCGGCCAG
GTCGTGTGTCTGATCGGTCC

Product: ABC polar amino acid transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFFQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVIRGLPIIVQLFYIYFVLPDLG
VQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEAAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSL
ASTITVAEMTRAGQLIASSTFQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR

Sequences:

>Translated_218_residues
MFFQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVIRGLPIIVQLFYIYFVLPDLG
VQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEAAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSL
ASTITVAEMTRAGQLIASSTFQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR
>Mature_218_residues
MFFQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVIRGLPIIVQLFYIYFVLPDLG
VQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEAAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSL
ASTITVAEMTRAGQLIASSTFQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=191, Percent_Identity=43.455497382199, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=36.231884057971, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=33.495145631068, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=30.2631578947368, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=30.316742081448, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786874, Length=223, Percent_Identity=27.8026905829596, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=29.9065420560748, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI48994930, Length=169, Percent_Identity=30.1775147928994, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082239, Length=129, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23713; Mature: 23713

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVI
CCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RGLPIIVQLFYIYFVLPDLGVQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEAA
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASST
HHCCCHHHHHHHHHHCCHHHEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFFQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVI
CCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RGLPIIVQLFYIYFVLPDLGVQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHGQIEAA
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASST
HHCCCHHHHHHHHHHCCHHHEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]