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The map label for this gene is lutB [H]

Identifier: 91784253

GI number: 91784253

Start: 3198852

End: 3200267

Strand: Reverse

Name: lutB [H]

Synonym: Bxe_A1548

Alternate gene names: 91784253

Gene position: 3200267-3198852 (Counterclockwise)

Preceding gene: 91784254

Following gene: 91784251

Centisome position: 65.37

GC content: 65.11

Gene sequence:

>1416_bases
ATGCAAGTCCAATCCATGCAATTCAAGGCACGCGCCGGCCAGAAGCTCGCCGACCAGCGCTTGCAGCAGAACCTGACCAA
GCTGTCGACCAAATTCGTGTCGGCGCGCGCCGCGGCCATGACCGAGATCGACTTTCCGGCCACGCGCGCCGCGCTGAAGG
AGCGCCGCAATCGCGCGCTGGACAATCTCGACGTGTGGCTGGAAACCTTCGAGCGTGAGGCTGCACGGCGTGGCGTGACC
GTCCTCTTCGCGGAGACGACCCAGGAGGCTGCGCGGCTCATCGGAGACATTGCGCGCCGGCACGAGGTGAAGAAGGTGAT
CAAGACCAAGTCGATGGTCACCGAAGAAATGCGCCTGAACGAAGTGCTCGGGCAAATGGGCGTGCAATCCATCGAAACGG
ATCTGGGCGAGTACATTCTCCAGATCAACGGCAATGAGCCGCCGAGCCACATCATCGCGCCGGTCGTCCACAAAGATAAG
GACGAGATCGCGGACCTGTTCGCGAAGACTCACAACCGGCCGCGCCTGACCGAAATCACCGACATGACACGCGAAGCGCG
CGAGATGCTGCGTCCGCATTTCATGACGGCGGACATGGGGGTGACGGGCGGCAACTTCGTGGTGGCGGAAACCGGCTCGG
TCGTGCTGGTCACGAACGAGGGCAACGAAGGCATGTGCACCGTCATGCCGCGCGTGCATGTGGCCGTGACGGGCATCGAG
AAAGTGCTGCCCACGCTCGAAGATCTGGCCACGGCAATGCGTCTGCTGCCGCGTTCGGCGACCGGACAGGCCACTTCGAA
CTACTTTTCCGTGCTGACCGGGCCACGCGGCGAGGGCGACCAGGACGGTCCCGAGCACATGTACGTGGTGCTCGTCGACG
GCGGGCGCACGGGGCTGATCGGCGGCGACTTCCAGGAAATGCTCAGGTGCATCCGCTGCGGCGCGTGCATGAACCATTGC
CCGGTGTACCAGAAGGTGGGCGGCCACGCGTACGGCTGGGTGTATCCCGGTCCGATGGGCTCGGTGTTGACGCCGAGCTA
TGTCGGCATCGACAAGGCACTGGATTTGCCGCAAGCCGCGACCTTGTGCGGCGAGTGCAACAGCGTGTGCCCGGTGGGGA
TTCCGCTGTCGGATCTGTTGCGCAAGCTGCGCGAGAAACAGGTGGAGCGGCGCCTGCGCCCCTGGAAAGAGCGCGCGGGG
CTCGCCGTGTGGGGTTTCCTGGCGCTGCATCCCGATGCTTATGCGCTGTTCACCAGGCTGGCGGTGCGCGTGCTGGAGCG
CATGGGCGGAAGGAACCGGTCCATCGCCCGGCTGCCGCTAGGCGGCGCCGGTTGGACCAATACGCGGGAGATGCCGGCGC
CGGTCGGCCGGACGTTCAGGGAGTTGTACGCCGCGCAGCGCAGCCATATTGGCTGA

Upstream 100 bases:

>100_bases
GTAACGCGGCTTGCCGCATTTCCGCCGTGTTCAGATACGCGCGCTTCACGCGTGCTTTTCCCGATTCCGCCGATTCCGCC
GATTTACGCATAAGGCCGCC

Downstream 100 bases:

>100_bases
GCGGGTTTTGCCCGGCGGGGCGAGCGGTCATTTTTTCAGAGTTTGCTGTCATTGGGCGGGCGCGAGCCGTAGATCCGGCA
TCGCGCTGTCTGGCGGCGCT

Product: putative iron-sulfur binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MQVQSMQFKARAGQKLADQRLQQNLTKLSTKFVSARAAAMTEIDFPATRAALKERRNRALDNLDVWLETFEREAARRGVT
VLFAETTQEAARLIGDIARRHEVKKVIKTKSMVTEEMRLNEVLGQMGVQSIETDLGEYILQINGNEPPSHIIAPVVHKDK
DEIADLFAKTHNRPRLTEITDMTREAREMLRPHFMTADMGVTGGNFVVAETGSVVLVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQATSNYFSVLTGPRGEGDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGIDKALDLPQAATLCGECNSVCPVGIPLSDLLRKLREKQVERRLRPWKERAG
LAVWGFLALHPDAYALFTRLAVRVLERMGGRNRSIARLPLGGAGWTNTREMPAPVGRTFRELYAAQRSHIG

Sequences:

>Translated_471_residues
MQVQSMQFKARAGQKLADQRLQQNLTKLSTKFVSARAAAMTEIDFPATRAALKERRNRALDNLDVWLETFEREAARRGVT
VLFAETTQEAARLIGDIARRHEVKKVIKTKSMVTEEMRLNEVLGQMGVQSIETDLGEYILQINGNEPPSHIIAPVVHKDK
DEIADLFAKTHNRPRLTEITDMTREAREMLRPHFMTADMGVTGGNFVVAETGSVVLVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQATSNYFSVLTGPRGEGDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGIDKALDLPQAATLCGECNSVCPVGIPLSDLLRKLREKQVERRLRPWKERAG
LAVWGFLALHPDAYALFTRLAVRVLERMGGRNRSIARLPLGGAGWTNTREMPAPVGRTFRELYAAQRSHIG
>Mature_471_residues
MQVQSMQFKARAGQKLADQRLQQNLTKLSTKFVSARAAAMTEIDFPATRAALKERRNRALDNLDVWLETFEREAARRGVT
VLFAETTQEAARLIGDIARRHEVKKVIKTKSMVTEEMRLNEVLGQMGVQSIETDLGEYILQINGNEPPSHIIAPVVHKDK
DEIADLFAKTHNRPRLTEITDMTREAREMLRPHFMTADMGVTGGNFVVAETGSVVLVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQATSNYFSVLTGPRGEGDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGIDKALDLPQAATLCGECNSVCPVGIPLSDLLRKLREKQVERRLRPWKERAG
LAVWGFLALHPDAYALFTRLAVRVLERMGGRNRSIARLPLGGAGWTNTREMPAPVGRTFRELYAAQRSHIG

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=474, Percent_Identity=37.3417721518987, Blast_Score=345, Evalue=5e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52088; Mature: 52088

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQSMQFKARAGQKLADQRLQQNLTKLSTKFVSARAAAMTEIDFPATRAALKERRNRAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DNLDVWLETFEREAARRGVTVLFAETTQEAARLIGDIARRHEVKKVIKTKSMVTEEMRLN
HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLGQMGVQSIETDLGEYILQINGNEPPSHIIAPVVHKDKDEIADLFAKTHNRPRLTEIT
HHHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHH
DMTREAREMLRPHFMTADMGVTGGNFVVAETGSVVLVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQATSNYFSVLTGPRGEGDQDGPEHMYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCC
GGDFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGIDKALDLPQAA
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCHHCCHHHCCCCHHH
TLCGECNSVCPVGIPLSDLLRKLREKQVERRLRPWKERAGLAVWGFLALHPDAYALFTRL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEHHHHHCCHHHHHHHHH
AVRVLERMGGRNRSIARLPLGGAGWTNTREMPAPVGRTFRELYAAQRSHIG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVQSMQFKARAGQKLADQRLQQNLTKLSTKFVSARAAAMTEIDFPATRAALKERRNRAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DNLDVWLETFEREAARRGVTVLFAETTQEAARLIGDIARRHEVKKVIKTKSMVTEEMRLN
HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLGQMGVQSIETDLGEYILQINGNEPPSHIIAPVVHKDKDEIADLFAKTHNRPRLTEIT
HHHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHH
DMTREAREMLRPHFMTADMGVTGGNFVVAETGSVVLVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQATSNYFSVLTGPRGEGDQDGPEHMYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCC
GGDFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGIDKALDLPQAA
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCHHCCHHHCCCCHHH
TLCGECNSVCPVGIPLSDLLRKLREKQVERRLRPWKERAGLAVWGFLALHPDAYALFTRL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEHHHHHCCHHHHHHHHH
AVRVLERMGGRNRSIARLPLGGAGWTNTREMPAPVGRTFRELYAAQRSHIG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA