| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784223
Identifier: 91784223
GI number: 91784223
Start: 3167604
End: 3168344
Strand: Reverse
Name: 91784223
Synonym: Bxe_A1578
Alternate gene names: NA
Gene position: 3168344-3167604 (Counterclockwise)
Preceding gene: 91784227
Following gene: 91784222
Centisome position: 64.72
GC content: 69.5
Gene sequence:
>741_bases ATGGCATGCGCGGCGGACCTCGAGTTCGACGAACCGGCCGGGCTGCCGGGCCGTCCGGCGCGGCCGGAACTGGTCGATCC GCGCCATCTGAAGCGGCGCAGCATGCAATCGCCGCAAGGGCGCGCGGTTCTGCTGCACGCGCTCGCGCATATCGAATTCA ACGCGATCAATCTTGCGCTCGACGCCGTCTGGCGCTTCGCCGGCATGCCCGCCGCGTTCTACACCGACTGGCTCAAAGTC GCCGCCGAAGAGGCGTATCACTTCTCGCTGCTGGCCGCGCGCCTTGCGGAGTACGGCCACGTCTACGGCGACTTTCCGGC TCACGACGGTTTGTGGGACATGTGCGAGCGCACCCGCGGCGACGTGCTGGCGCGCATGGCGCTGGTGCCACGCACGCTCG AAGCACGCGGCCTCGACGCATCTCCGCCGATCCGCGCGCGCCTGCTGCAGGCGGGCGATCAGGCGTCAGCGGCGATTCTC GACGTGATCCTGCGCGATGAAATCGGCCACGTGCTGATCGGCAACCGCTGGTTCCGCCACCTGTGCGACGGCAGCGGCCG CGACCCTCACGAGACTTACACGCGCCTCGCCGACCAGTATCACGCACCGAAATTACGTGGTCCGTTCAATTTCGAGGCGC GCCGCGATGCCGGTTTCGACGAGGCGGAACTGGCCGAGCTGGCGGCCCTCGCGGGCCTCGACGCACCGGAGGCGCCGCCG TCGGCCGCCGCCGCCGGTTGA
Upstream 100 bases:
>100_bases TTGCGCGCGCTCCGCGGCGCTCGGTGCACTGCGCGAAGCCGACCCGGCCGCCAAGGCCGCCGCGGCCCGCGCGCTCTATG CCGCGGTGCTCGAAGGCAGC
Downstream 100 bases:
>100_bases GGTTTCCTTCGCCAACCGGCACCGTGCATTGGCCGGCTATCTCGTTATAATCGAACGACCATTCTTTTTTGGACGTGCCG TTCATGAACACTTCCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MACAADLEFDEPAGLPGRPARPELVDPRHLKRRSMQSPQGRAVLLHALAHIEFNAINLALDAVWRFAGMPAAFYTDWLKV AAEEAYHFSLLAARLAEYGHVYGDFPAHDGLWDMCERTRGDVLARMALVPRTLEARGLDASPPIRARLLQAGDQASAAIL DVILRDEIGHVLIGNRWFRHLCDGSGRDPHETYTRLADQYHAPKLRGPFNFEARRDAGFDEAELAELAALAGLDAPEAPP SAAAAG
Sequences:
>Translated_246_residues MACAADLEFDEPAGLPGRPARPELVDPRHLKRRSMQSPQGRAVLLHALAHIEFNAINLALDAVWRFAGMPAAFYTDWLKV AAEEAYHFSLLAARLAEYGHVYGDFPAHDGLWDMCERTRGDVLARMALVPRTLEARGLDASPPIRARLLQAGDQASAAIL DVILRDEIGHVLIGNRWFRHLCDGSGRDPHETYTRLADQYHAPKLRGPFNFEARRDAGFDEAELAELAALAGLDAPEAPP SAAAAG >Mature_245_residues ACAADLEFDEPAGLPGRPARPELVDPRHLKRRSMQSPQGRAVLLHALAHIEFNAINLALDAVWRFAGMPAAFYTDWLKVA AEEAYHFSLLAARLAEYGHVYGDFPAHDGLWDMCERTRGDVLARMALVPRTLEARGLDASPPIRARLLQAGDQASAAILD VILRDEIGHVLIGNRWFRHLCDGSGRDPHETYTRLADQYHAPKLRGPFNFEARRDAGFDEAELAELAALAGLDAPEAPPS AAAAG
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 26948; Mature: 26817
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAADLEFDEPAGLPGRPARPELVDPRHLKRRSMQSPQGRAVLLHALAHIEFNAINLAL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DAVWRFAGMPAAFYTDWLKVAAEEAYHFSLLAARLAEYGHVYGDFPAHDGLWDMCERTRG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH DVLARMALVPRTLEARGLDASPPIRARLLQAGDQASAAILDVILRDEIGHVLIGNRWFRH HHHHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECHHHHHH LCDGSGRDPHETYTRLADQYHAPKLRGPFNFEARRDAGFDEAELAELAALAGLDAPEAPP HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC SAAAAG CCCCCC >Mature Secondary Structure ACAADLEFDEPAGLPGRPARPELVDPRHLKRRSMQSPQGRAVLLHALAHIEFNAINLAL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DAVWRFAGMPAAFYTDWLKVAAEEAYHFSLLAARLAEYGHVYGDFPAHDGLWDMCERTRG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH DVLARMALVPRTLEARGLDASPPIRARLLQAGDQASAAILDVILRDEIGHVLIGNRWFRH HHHHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECHHHHHH LCDGSGRDPHETYTRLADQYHAPKLRGPFNFEARRDAGFDEAELAELAALAGLDAPEAPP HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC SAAAAG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]