| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hflK [H]
Identifier: 91784200
GI number: 91784200
Start: 3143658
End: 3145040
Strand: Reverse
Name: hflK [H]
Synonym: Bxe_A1601
Alternate gene names: 91784200
Gene position: 3145040-3143658 (Counterclockwise)
Preceding gene: 91784201
Following gene: 91784199
Centisome position: 64.24
GC content: 65.65
Gene sequence:
>1383_bases GTGAACGATTACAACGAGCGGAGTATCTGGCTGCGCATGCGCGCCATGCTTTCATTGAACGATCCGCGCTGGGGCCGGGG GGACGGCAATGGCGACCGGCAACGTCCAAACGAGCCCAAACGTCCGCCGACCAAGGACGGTGAAGGGCCGCCCGATCTCG ACGAGATGTGGCGCGATTTCAACCGCCGTTTGAGCCGCGTGTTTGGCCGCAAGGGCGGCGGCGCGGGTGGCGGCCGGCCG GACAACGGTCGTGGCGCGCGCATTGGCTTGGGCATCGTGATCGGCGTGCTGCTGGCCATTTATCTCGGCAGCGGGGTGTT CGTCGTGCAGGACGGCCAGGCCGGCGTCGTGATGCAGTTCGGCAAGTATCGCTACACGGCGGGTCAGGGCGTGCACTGGC GTCTGCCGTATCCGTTCGAAGCGCATGAGCTCGTCAATATCGGCCAGGTCCGCCAGGTGGAGATCGGCCGCAATAACGTG GTGCGTCTCGCGAACGTGAAAGACGCGTCGATGCTCACGCACGACGCGGATATCGTCGACGTGCGCTTCGCCGTGCAATA CCAGGTGAAGAAGCCGACCGACTACCTGTTCCGCAGCGTCGATCCCGATCAGGGTGTGATGCAGGCTGCTCAGGCGGCGG TGCGCAGCATCGTCGGCGCGCGCAGCACCAATGACATCCTCTATCAGGATCGCGAAACAATTCGCCAGCAGCTGATGGCG GCGATCCAGCAATCCCTGGATGAATACCAGTCCGGACTTGCCGTGACCGGTGTGACCATCCAGGGCGTGCAGGCGCCCGA CCAGGTGCAGGCCGCGTTTGACGACGCCGCCAAAGTCCGTCAGGAAAACGAGCGCGCGAAACGCGACGCCGAGGCCTACG CCGCGGATCTGTTGCCGCGCGCGCAAGCCGACGTGGCTCGCCAGATCGACGAAGCCAAAACGTACAGCGACAAGACGGTG GCCCAGGCGCAAGGCGACGCCGAGCGCTTCAAGCAGGTCTACGCGCAGTACTCGAAAGCGCCCGCTGTGATTCGCGAGCG CATGTATCTGGAAACCATGCAGCAGATCTATTCGAATACGACCAAGGTGTTTGTGGACAGCAAGAGCGGCAACAATGTGC TGTATCTGCCGCTCGACAAGCTGGTCGAGCAGACCCGTCAGCGGGCGGCCGACGCCGCTTCGGGTGCCGTGGCCGCCGCC GCGCCGCAGGCAGCGAGCGGTGCCGCGCTGCCGTCGGCCGTGCCGTCTGCCTCTGCAACCGGCGCCGCAGCTTCCGCGCC GGCCGCGGTTGCCACGCCCGCCAGCCAGGCCGCAGCCAGCAGCGACGCGCTGCGCTCACGCGACTCCTTCCGCAGCCGTA TGCGCGAAGACGACGTTCAATAA
Upstream 100 bases:
>100_bases CGGTCGGCGGCACCACGCGACGACCGCAAGGTCCCAGAACTCGGGCATTGACCCGTTCCAATTGCACTGACCCGCTGTCT ACTCTGGTGAACGAACACAG
Downstream 100 bases:
>100_bases GGAGCGCATAACATGAACAGGATCATTGCGCTCGTCGTGGCTGTCGTCATCGTGCTGTTTGCCGCTTCGTCTATGGTGTT TGTCGTCGATCAGCGGCATC
Product: FtsH protease activity modulator HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MNDYNERSIWLRMRAMLSLNDPRWGRGDGNGDRQRPNEPKRPPTKDGEGPPDLDEMWRDFNRRLSRVFGRKGGGAGGGRP DNGRGARIGLGIVIGVLLAIYLGSGVFVVQDGQAGVVMQFGKYRYTAGQGVHWRLPYPFEAHELVNIGQVRQVEIGRNNV VRLANVKDASMLTHDADIVDVRFAVQYQVKKPTDYLFRSVDPDQGVMQAAQAAVRSIVGARSTNDILYQDRETIRQQLMA AIQQSLDEYQSGLAVTGVTIQGVQAPDQVQAAFDDAAKVRQENERAKRDAEAYAADLLPRAQADVARQIDEAKTYSDKTV AQAQGDAERFKQVYAQYSKAPAVIRERMYLETMQQIYSNTTKVFVDSKSGNNVLYLPLDKLVEQTRQRAADAASGAVAAA APQAASGAALPSAVPSASATGAAASAPAAVATPASQAAASSDALRSRDSFRSRMREDDVQ
Sequences:
>Translated_460_residues MNDYNERSIWLRMRAMLSLNDPRWGRGDGNGDRQRPNEPKRPPTKDGEGPPDLDEMWRDFNRRLSRVFGRKGGGAGGGRP DNGRGARIGLGIVIGVLLAIYLGSGVFVVQDGQAGVVMQFGKYRYTAGQGVHWRLPYPFEAHELVNIGQVRQVEIGRNNV VRLANVKDASMLTHDADIVDVRFAVQYQVKKPTDYLFRSVDPDQGVMQAAQAAVRSIVGARSTNDILYQDRETIRQQLMA AIQQSLDEYQSGLAVTGVTIQGVQAPDQVQAAFDDAAKVRQENERAKRDAEAYAADLLPRAQADVARQIDEAKTYSDKTV AQAQGDAERFKQVYAQYSKAPAVIRERMYLETMQQIYSNTTKVFVDSKSGNNVLYLPLDKLVEQTRQRAADAASGAVAAA APQAASGAALPSAVPSASATGAAASAPAAVATPASQAAASSDALRSRDSFRSRMREDDVQ >Mature_460_residues MNDYNERSIWLRMRAMLSLNDPRWGRGDGNGDRQRPNEPKRPPTKDGEGPPDLDEMWRDFNRRLSRVFGRKGGGAGGGRP DNGRGARIGLGIVIGVLLAIYLGSGVFVVQDGQAGVVMQFGKYRYTAGQGVHWRLPYPFEAHELVNIGQVRQVEIGRNNV VRLANVKDASMLTHDADIVDVRFAVQYQVKKPTDYLFRSVDPDQGVMQAAQAAVRSIVGARSTNDILYQDRETIRQQLMA AIQQSLDEYQSGLAVTGVTIQGVQAPDQVQAAFDDAAKVRQENERAKRDAEAYAADLLPRAQADVARQIDEAKTYSDKTV AQAQGDAERFKQVYAQYSKAPAVIRERMYLETMQQIYSNTTKVFVDSKSGNNVLYLPLDKLVEQTRQRAADAASGAVAAA APQAASGAALPSAVPSASATGAAASAPAAVATPASQAAASSDALRSRDSFRSRMREDDVQ
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=293, Percent_Identity=33.1058020477816, Blast_Score=191, Evalue=9e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 50077; Mature: 50077
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDYNERSIWLRMRAMLSLNDPRWGRGDGNGDRQRPNEPKRPPTKDGEGPPDLDEMWRDF CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NRRLSRVFGRKGGGAGGGRPDNGRGARIGLGIVIGVLLAIYLGSGVFVVQDGQAGVVMQF HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEC GKYRYTAGQGVHWRLPYPFEAHELVNIGQVRQVEIGRNNVVRLANVKDASMLTHDADIVD CCEEEECCCCEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHCCCCEEE VRFAVQYQVKKPTDYLFRSVDPDQGVMQAAQAAVRSIVGARSTNDILYQDRETIRQQLMA EEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AIQQSLDEYQSGLAVTGVTIQGVQAPDQVQAAFDDAAKVRQENERAKRDAEAYAADLLPR HHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AQADVARQIDEAKTYSDKTVAQAQGDAERFKQVYAQYSKAPAVIRERMYLETMQQIYSNT HHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC TKVFVDSKSGNNVLYLPLDKLVEQTRQRAADAASGAVAAAAPQAASGAALPSAVPSASAT EEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC GAAASAPAAVATPASQAAASSDALRSRDSFRSRMREDDVQ CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNDYNERSIWLRMRAMLSLNDPRWGRGDGNGDRQRPNEPKRPPTKDGEGPPDLDEMWRDF CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NRRLSRVFGRKGGGAGGGRPDNGRGARIGLGIVIGVLLAIYLGSGVFVVQDGQAGVVMQF HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEC GKYRYTAGQGVHWRLPYPFEAHELVNIGQVRQVEIGRNNVVRLANVKDASMLTHDADIVD CCEEEECCCCEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHCCCCEEE VRFAVQYQVKKPTDYLFRSVDPDQGVMQAAQAAVRSIVGARSTNDILYQDRETIRQQLMA EEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AIQQSLDEYQSGLAVTGVTIQGVQAPDQVQAAFDDAAKVRQENERAKRDAEAYAADLLPR HHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AQADVARQIDEAKTYSDKTVAQAQGDAERFKQVYAQYSKAPAVIRERMYLETMQQIYSNT HHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC TKVFVDSKSGNNVLYLPLDKLVEQTRQRAADAASGAVAAAAPQAASGAALPSAVPSASAT EEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC GAAASAPAAVATPASQAAASSDALRSRDSFRSRMREDDVQ CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]