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The map label for this gene is rraA [C]

Identifier: 91784156

GI number: 91784156

Start: 3092082

End: 3092576

Strand: Reverse

Name: rraA [C]

Synonym: Bxe_A1645

Alternate gene names: 91784156

Gene position: 3092576-3092082 (Counterclockwise)

Preceding gene: 91784158

Following gene: 91784155

Centisome position: 63.17

GC content: 67.68

Gene sequence:

>495_bases
ATGAGCTTTGCTACCGCGGACTTGTGCGACGCGCACGAGGACCAGCTGGCGCTCGGCACGTTGCGCGTGCTCGAGCCGGT
CTTTCACCTGTTCAGCCGTGCCGGGTGTTTCAGCGGTGAAGCGGTGACGCTGAAGGTATTCGAGGACAATGCGCTCGTGC
GCGCCACGCTCGAAGAGAAGGGCGCGGGCCGTGTGCTGGTGGTCGACGGCGGCGGCAGCCAGCGCTGCGCGCTGGTGGGC
GGCAACCTTGCGCAGATCGCGCAACAGAACGGTTGGGCGGGCATCGTCCTGAACGGCTGCGTGCGCGATACGCTGGAGCT
CAACGAAGTGAACGTCGGCATTGCGGCTTTGGCAACCTGCCCGCGGCGCGGCCAGAAGCTCGGCACTGGCGAGCGTGGCG
TGGCGGTGCAATTGCCCGGCGCGCTGGTGCGCCCTGGTGAATGGATCTACGCGGACAGCGACGGCGTGCTGGTGGCGAGC
GCGGCGTTGAAGTGA

Upstream 100 bases:

>100_bases
AAACCCCGCTACGGCAAACCGCCGCGGGCCTCTCATTGTAGGTGTTGCGTGGCACCCGGCGTTGCATAATGTGCCGATGC
CCAGACCCGAGGAGAACTCC

Downstream 100 bases:

>100_bases
ACAGAGAGTTGAAGTGCACTGCGCCGAGCTGAACTGAACCGCAGCCAGGACGCAGGCTCGAACAGAAGCACGAGTCACCC
GAACCCCCTTCAAGGAGAGC

Product: ribonuclease activity regulator protein RraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSFATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAGRVLVVDGGGSQRCALVG
GNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVAS
AALK

Sequences:

>Translated_164_residues
MSFATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAGRVLVVDGGGSQRCALVG
GNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVAS
AALK
>Mature_163_residues
SFATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAGRVLVVDGGGSQRCALVGG
NLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASA
ALK

Specific function: Regulator Of Rnase E/Rne, Which Inhibits The Endonuclease Activity And Thereby Leads To Increase The Half-Life And Abundance Of Rnas. General Modulator Of RNA Abundance. Does Not Have Any Methyltransferase Activity. [C]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RraA family [H]

Homologues:

Organism=Escherichia coli, GI1790364, Length=164, Percent_Identity=40.8536585365854, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005493
- InterPro:   IPR010203 [H]

Pfam domain/function: PF03737 Methyltransf_6 [H]

EC number: NA

Molecular weight: Translated: 17073; Mature: 16942

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCC
GAGRVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATC
CCCEEEEEECCCCCEEEEECCCHHHHHHCCCCEEEEEECCCCCCEEECCCCCCHHHEECC
PRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAALK
CCCCCCCCCCCCCEEEECCCCEECCCCEEEECCCCEEEEEEECC
>Mature Secondary Structure 
SFATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCC
GAGRVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATC
CCCEEEEEECCCCCEEEEECCCHHHHHHCCCCEEEEEECCCCCCEEECCCCCCHHHEECC
PRRGQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAALK
CCCCCCCCCCCCCEEEECCCCEECCCCEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA