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The map label for this gene is skp [H]

Identifier: 91784110

GI number: 91784110

Start: 3036591

End: 3037118

Strand: Reverse

Name: skp [H]

Synonym: Bxe_A1691

Alternate gene names: 91784110

Gene position: 3037118-3036591 (Counterclockwise)

Preceding gene: 91784111

Following gene: 91784109

Centisome position: 62.03

GC content: 62.88

Gene sequence:

>528_bases
ATGACTTTGCTAACCGGTATGTTTTCGAAACGTGTGGCGTGCGCGCTGGCGCTGGCAATGACCTTGGGTGTCGGGGTGGC
GCATGGGCAGGAGGCGCGGATCGCGGCGGTGAATTCCGACCGTATCCTGCGCGAATCCGCTGCCGCGAAGGCCGCGCAGG
TCAAGCTCGAGGCCGAATTCGCCAAGCGTGACAAGGACCTTGCCGACATGGCGCAGAAGCTGAAGTCGATGTCCGATTCC
CTCGACAAGAACGGCGCGTCGATGTCGGCCGCCGACCGCGCGCAGAAGCAGCGCGACCTGTCGCAACTGGACACGGACTT
CCAGCGCAAGCAACGTGAGTTTCGCGAGGATCTGAACCAGCGCCGCAACGAAGAACTGGCGGCGGTGCTCGATCGCGCCA
ACAAGGTGATCAAGCAGATCGCCGAGGCGCAGCACTACGACCTGATCGTCCAGGAAGCGGTGTACGTGAGTCCGCGCATC
GATATCACCGATCAGGTGCTCAAGGCGCTGGCGGCGTCGGGTAACTGA

Upstream 100 bases:

>100_bases
GACCAGTATCAGAAATTCCAGTTCCAGATCGGGACGGCGTTCTGATCCGGCGGCTGGCGGCTCGGCCAGAAATGGCCGGC
CAAACTACAGTATCGAGAGG

Downstream 100 bases:

>100_bases
ACGCGGCAGCGGGGCCGCACGCGGCCCGGTAGCAGAAGATCTGACAAGTTGGACTGAACGGTAGGAGACAGGATAGGCAT
GGCATTTACGCTCGAGGACA

Product: Outer membrane protein (OmpH-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTLLTGMFSKRVACALALAMTLGVGVAHGQEARIAAVNSDRILRESAAAKAAQVKLEAEFAKRDKDLADMAQKLKSMSDS
LDKNGASMSAADRAQKQRDLSQLDTDFQRKQREFREDLNQRRNEELAAVLDRANKVIKQIAEAQHYDLIVQEAVYVSPRI
DITDQVLKALAASGN

Sequences:

>Translated_175_residues
MTLLTGMFSKRVACALALAMTLGVGVAHGQEARIAAVNSDRILRESAAAKAAQVKLEAEFAKRDKDLADMAQKLKSMSDS
LDKNGASMSAADRAQKQRDLSQLDTDFQRKQREFREDLNQRRNEELAAVLDRANKVIKQIAEAQHYDLIVQEAVYVSPRI
DITDQVLKALAASGN
>Mature_174_residues
TLLTGMFSKRVACALALAMTLGVGVAHGQEARIAAVNSDRILRESAAAKAAQVKLEAEFAKRDKDLADMAQKLKSMSDSL
DKNGASMSAADRAQKQRDLSQLDTDFQRKQREFREDLNQRRNEELAAVLDRANKVIKQIAEAQHYDLIVQEAVYVSPRID
ITDQVLKALAASGN

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19273; Mature: 19142

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLTGMFSKRVACALALAMTLGVGVAHGQEARIAAVNSDRILRESAAAKAAQVKLEAEF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
AKRDKDLADMAQKLKSMSDSLDKNGASMSAADRAQKQRDLSQLDTDFQRKQREFREDLNQ
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRNEELAAVLDRANKVIKQIAEAQHYDLIVQEAVYVSPRIDITDQVLKALAASGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLLTGMFSKRVACALALAMTLGVGVAHGQEARIAAVNSDRILRESAAAKAAQVKLEAEF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
AKRDKDLADMAQKLKSMSDSLDKNGASMSAADRAQKQRDLSQLDTDFQRKQREFREDLNQ
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRNEELAAVLDRANKVIKQIAEAQHYDLIVQEAVYVSPRIDITDQVLKALAASGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12886019 [H]