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The map label for this gene is yjfH [C]

Identifier: 91784104

GI number: 91784104

Start: 3031008

End: 3031835

Strand: Reverse

Name: yjfH [C]

Synonym: Bxe_A1697

Alternate gene names: 91784104

Gene position: 3031835-3031008 (Counterclockwise)

Preceding gene: 91784105

Following gene: 91784102

Centisome position: 61.93

GC content: 63.89

Gene sequence:

>828_bases
GTGTCATCAACCTCTTCCTCATTCTCACTGTCTTCGCTGCCTGTGAAAGCCATCACCTCGCGGGACAATCCGCTCTATAA
ACGTCTGAAGGCACTGGCCGGCTCGACGCATCAACAGCGCAAGAGCGGGCATGCGCTGCTCGAAGGGTTTCATCTCGCGA
GTGCGTATCTCGACGTGGCCGGGCAACCGGAAATGTGTATCGTCACGGACGGCGCGCTGCGTCACGACGAAGCGCAGGCG
ATCGTTTCGCGCATCGAAGATCATCGGCTCGTGACACTGCCGGATGCATTGTTCGGGCAGTTGTCGAATGTCGTGCACGG
AGTGGGCATTCTGCTGCTGGTCGAAAAGCTCGCTACGCCACTGCCCGACGAGGTCGCGCAAACCTGCCTCGTGCTCGACG
GCGTGCAGGACGCGGGCAACGTCGGCTCGATTCTGCGCAGCGCGGCGGCGGCGGGCATTCAGCAAGTGTTCTGCGCGCCG
GGCACGGCGTACGCGTGGTCGTCGAAAGTCTTGCGCTCGGGTATGGGCGCGCATTTCCTGCTGCAGATTCACGAGGACGT
GGAAGCGCAGGCGCTGATCGAACGGCTCGCGGTGCCGATCGTCATTACGGATTCGCACGGCGCCGAGGCGATCTACGATT
GCGATCTGAGTGGACCGCTTGCGTGGGTGTTCGGCAACGAAGGGGCGGGGGTCTCGCAGATCTGGCGCGATGCGGTCTCG
TTGCGGGTGACGATTCCCCAGCCGGGCGGCATGGAGTCGCTGAATGTGGCGGCTGCGGCGGCCGTGTGCGTATTCGAGCA
GTGCCGCCAGCAGCGCGGGCGCGGTTGA

Upstream 100 bases:

>100_bases
GCAATGTGATCGTCGTCTCCGAAGTGATGCTCGACGACGACGCCTTCGGCGAGCGCAGCGGCGCCGCCTGAGCATCACGC
GAGCGCTTCATGAGCGCCGC

Downstream 100 bases:

>100_bases
CGCCGTTTGCCTGACACGCGCGGGCGCTGCCGCGCGCGTGTCTTCTTCAGGCCGCCTGCCTTATGCCGCGGCTCAGGCTC
CTCAGGCTCAATAAGCCGCG

Product: putative RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSSTSSSFSLSSLPVKAITSRDNPLYKRLKALAGSTHQQRKSGHALLEGFHLASAYLDVAGQPEMCIVTDGALRHDEAQA
IVSRIEDHRLVTLPDALFGQLSNVVHGVGILLLVEKLATPLPDEVAQTCLVLDGVQDAGNVGSILRSAAAAGIQQVFCAP
GTAYAWSSKVLRSGMGAHFLLQIHEDVEAQALIERLAVPIVITDSHGAEAIYDCDLSGPLAWVFGNEGAGVSQIWRDAVS
LRVTIPQPGGMESLNVAAAAAVCVFEQCRQQRGRG

Sequences:

>Translated_275_residues
MSSTSSSFSLSSLPVKAITSRDNPLYKRLKALAGSTHQQRKSGHALLEGFHLASAYLDVAGQPEMCIVTDGALRHDEAQA
IVSRIEDHRLVTLPDALFGQLSNVVHGVGILLLVEKLATPLPDEVAQTCLVLDGVQDAGNVGSILRSAAAAGIQQVFCAP
GTAYAWSSKVLRSGMGAHFLLQIHEDVEAQALIERLAVPIVITDSHGAEAIYDCDLSGPLAWVFGNEGAGVSQIWRDAVS
LRVTIPQPGGMESLNVAAAAAVCVFEQCRQQRGRG
>Mature_274_residues
SSTSSSFSLSSLPVKAITSRDNPLYKRLKALAGSTHQQRKSGHALLEGFHLASAYLDVAGQPEMCIVTDGALRHDEAQAI
VSRIEDHRLVTLPDALFGQLSNVVHGVGILLLVEKLATPLPDEVAQTCLVLDGVQDAGNVGSILRSAAAAGIQQVFCAPG
TAYAWSSKVLRSGMGAHFLLQIHEDVEAQALIERLAVPIVITDSHGAEAIYDCDLSGPLAWVFGNEGAGVSQIWRDAVSL
RVTIPQPGGMESLNVAAAAAVCVFEQCRQQRGRG

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI8922534, Length=302, Percent_Identity=28.476821192053, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1790623, Length=158, Percent_Identity=31.0126582278481, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 29100; Mature: 28969

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTSSSFSLSSLPVKAITSRDNPLYKRLKALAGSTHQQRKSGHALLEGFHLASAYLDVA
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQPEMCIVTDGALRHDEAQAIVSRIEDHRLVTLPDALFGQLSNVVHGVGILLLVEKLATP
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPDEVAQTCLVLDGVQDAGNVGSILRSAAAAGIQQVFCAPGTAYAWSSKVLRSGMGAHFL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEE
LQIHEDVEAQALIERLAVPIVITDSHGAEAIYDCDLSGPLAWVFGNEGAGVSQIWRDAVS
EEECCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHE
LRVTIPQPGGMESLNVAAAAAVCVFEQCRQQRGRG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSTSSSFSLSSLPVKAITSRDNPLYKRLKALAGSTHQQRKSGHALLEGFHLASAYLDVA
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQPEMCIVTDGALRHDEAQAIVSRIEDHRLVTLPDALFGQLSNVVHGVGILLLVEKLATP
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPDEVAQTCLVLDGVQDAGNVGSILRSAAAAGIQQVFCAPGTAYAWSSKVLRSGMGAHFL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEE
LQIHEDVEAQALIERLAVPIVITDSHGAEAIYDCDLSGPLAWVFGNEGAGVSQIWRDAVS
EEECCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHE
LRVTIPQPGGMESLNVAAAAAVCVFEQCRQQRGRG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]