| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is insK [H]
Identifier: 91784065
GI number: 91784065
Start: 2990201
End: 2991031
Strand: Reverse
Name: insK [H]
Synonym: Bxe_A1737
Alternate gene names: 91784065
Gene position: 2991031-2990201 (Counterclockwise)
Preceding gene: 91784066
Following gene: 91784063
Centisome position: 61.09
GC content: 62.58
Gene sequence:
>831_bases ATGATTGACCGTGGCCATGCGTTGCCGGTTTCGCAGCAAGTCCGGCTTGTTGGTATCGCGAGATCGAGCGCGTATTACCG GGCGCGGCCTGTCAGCGAAGTCGATCAACGTTTGATGCGCCGGATCGACGAACTGCATATGGAGTTTCCGTTTGCCGGTG CACGCATGCTGGCTCGCCTGCTGCGCCGGGAAAGCCACGAGGTTGGCCGCCGCCGCGTACGCACGCTCATGAAGCGCATG GGCGTGGAGGCGCTGTACTGCAAGCCGAACACGAGTCGACGCAACGCGCAGCACAAGGTCTGGCCGTATCTGCTGCGCAG CACGAAGATCGAGCGGGCCAACCAGGCCTGGGCACTCGACACGACTTACGTCCCCATGGCGCGCGGCTTCGTGTATCTGA CTGCGGTGGTGGACTGGGCCAGTCGCAAGATCCTCACGCACCGCGTGGCGATCACGCTGGAAGCCGTGCATGCCGTTGAA GCGCTGGAAGAGGCGCTCGCCCGCTATGGGCACCCCGACATCGTGAACACCGATCAGGGTAGCCAGTTCACGGCGGGAGC CTTCACCGAGGCGGTGCTGGGCCGAGGCATCCGGCTGTCGATGGACGGCAAAGGCGCCTGGCGCGACAACGTGTTTGTCG AGCGCGTGTGGCGCAGCATCAAGTACGAAGAGATTTATTTAAGAGCCTACGAGTCGGTCAGCCACGCCCGGCGCTCCATA GGCCAATACATTGAGCTGTACAACCGCAAACGTCCTCATTCGAGCCTGGCGGATCAGACGCCCGATGAGGCATACTTCGC GACGCTGCCAGCGATCAAATCGGCAGCATGA
Upstream 100 bases:
>100_bases TAGACGTGAAGACCCTGCACGCCAAGATCGGCCAACTCAGCCTGGAAAATGATTTTTTAAGCGGTGCGCTCACCAAGGCC GGATTGCTGAGCGCAAAGCG
Downstream 100 bases:
>100_bases TCGCCCCGGACGTTCCACTTAAAAATCTCGGGACCCTGTCCGAACAAGCGGCGCCACCTCTGCCCGTCCTCGTCCGGCAT CATCACGTCGAGAATCAGTA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIDRGHALPVSQQVRLVGIARSSAYYRARPVSEVDQRLMRRIDELHMEFPFAGARMLARLLRRESHEVGRRRVRTLMKRM GVEALYCKPNTSRRNAQHKVWPYLLRSTKIERANQAWALDTTYVPMARGFVYLTAVVDWASRKILTHRVAITLEAVHAVE ALEEALARYGHPDIVNTDQGSQFTAGAFTEAVLGRGIRLSMDGKGAWRDNVFVERVWRSIKYEEIYLRAYESVSHARRSI GQYIELYNRKRPHSSLADQTPDEAYFATLPAIKSAA
Sequences:
>Translated_276_residues MIDRGHALPVSQQVRLVGIARSSAYYRARPVSEVDQRLMRRIDELHMEFPFAGARMLARLLRRESHEVGRRRVRTLMKRM GVEALYCKPNTSRRNAQHKVWPYLLRSTKIERANQAWALDTTYVPMARGFVYLTAVVDWASRKILTHRVAITLEAVHAVE ALEEALARYGHPDIVNTDQGSQFTAGAFTEAVLGRGIRLSMDGKGAWRDNVFVERVWRSIKYEEIYLRAYESVSHARRSI GQYIELYNRKRPHSSLADQTPDEAYFATLPAIKSAA >Mature_276_residues MIDRGHALPVSQQVRLVGIARSSAYYRARPVSEVDQRLMRRIDELHMEFPFAGARMLARLLRRESHEVGRRRVRTLMKRM GVEALYCKPNTSRRNAQHKVWPYLLRSTKIERANQAWALDTTYVPMARGFVYLTAVVDWASRKILTHRVAITLEAVHAVE ALEEALARYGHPDIVNTDQGSQFTAGAFTEAVLGRGIRLSMDGKGAWRDNVFVERVWRSIKYEEIYLRAYESVSHARRSI GQYIELYNRKRPHSSLADQTPDEAYFATLPAIKSAA
Specific function: Involved in the transposition of the insertion sequence IS150 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Homo sapiens, GI310129419, Length=248, Percent_Identity=28.2258064516129, Blast_Score=78, Evalue=7e-15, Organism=Escherichia coli, GI1789981, Length=263, Percent_Identity=26.9961977186312, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788405, Length=153, Percent_Identity=34.640522875817, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1787263, Length=153, Percent_Identity=34.640522875817, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786753, Length=153, Percent_Identity=34.640522875817, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786570, Length=153, Percent_Identity=34.640522875817, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786490, Length=153, Percent_Identity=34.640522875817, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 31701; Mature: 31701
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRGHALPVSQQVRLVGIARSSAYYRARPVSEVDQRLMRRIDELHMEFPFAGARMLARL CCCCCCCCCHHCCEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LRRESHEVGRRRVRTLMKRMGVEALYCKPNTSRRNAQHKVWPYLLRSTKIERANQAWALD HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEC TTYVPMARGFVYLTAVVDWASRKILTHRVAITLEAVHAVEALEEALARYGHPDIVNTDQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SQFTAGAFTEAVLGRGIRLSMDGKGAWRDNVFVERVWRSIKYEEIYLRAYESVSHARRSI CCEEHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GQYIELYNRKRPHSSLADQTPDEAYFATLPAIKSAA HHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIDRGHALPVSQQVRLVGIARSSAYYRARPVSEVDQRLMRRIDELHMEFPFAGARMLARL CCCCCCCCCHHCCEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LRRESHEVGRRRVRTLMKRMGVEALYCKPNTSRRNAQHKVWPYLLRSTKIERANQAWALD HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEC TTYVPMARGFVYLTAVVDWASRKILTHRVAITLEAVHAVEALEEALARYGHPDIVNTDQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SQFTAGAFTEAVLGRGIRLSMDGKGAWRDNVFVERVWRSIKYEEIYLRAYESVSHARRSI CCEEHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GQYIELYNRKRPHSSLADQTPDEAYFATLPAIKSAA HHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841644; 2541046; 8041620; 9278503 [H]