| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784019
Identifier: 91784019
GI number: 91784019
Start: 2940441
End: 2941934
Strand: Reverse
Name: 91784019
Synonym: Bxe_A1786
Alternate gene names: NA
Gene position: 2941934-2940441 (Counterclockwise)
Preceding gene: 91784020
Following gene: 91784018
Centisome position: 60.09
GC content: 62.58
Gene sequence:
>1494_bases ATGTCTGGAACCCGCATCACCGACCAACAGGTTCGCCTCTACATGAACAAGCGCAAACACCATCCGCAGGAACTCGCGGC CGCGAAGGCAGGAATAAGCGTGCGCAGCGCACGTCGCATTGAGCGTGACGCGACGTTGCCATCCCAGAAGCCGCAGCGCT CCTGGCGCACCCGTCCCGATCCGTTCGCCGATGTCTGGGACAGCGAGGTCGTGCCGTTGCTGCGTAACGCTCCCCATCTG ATGGGCATCACGATCCTGCGCAAGCTGCAGGATGATCACCCGGGCTGCTATCCCGACAGCATGCGTCGCACGCTGGAACG ACGCATTTCTCAATGGCGGGCGCTCGAAGGTCCCAGCCAGGAGATCTTCTTCCCCCAGGAGCATCAGCCCGGCGTGCGCG GGCTGTCTGACTTCACTGATATGAGCAAGTTGTGCGTGACGATCGGCGGCGCACCGTTCGAGCACCGGCTGTATCACTTC GTGCTGGCATTCTCGCGCTGGGAGTATGCCTGCGTGGTTGAGGGCGGCGAGAGCTTCGAAGCCCTCGCCAACGGTTTGCA GAACGCTCTATGGCAGGCGGGAGGTTGCCCGCGCGAGCATCGCACCGACAGCCTGTCAGCCGCCTTCAAGAACCTGAGCG AGAAGGAAGACTTCACTACCCGTTACAAGGCGCTGCTCGATCACTACGAGATGCAGGGCACGCGTAACAATCGCGGTCTA GGTCACGAGAACGGGAGTGTCGAATCCTCGCACCGGTATCTGAAGGACGCAGTCGATCAAGCCCTGATGCTGCGTGGCCA TCGAGACTTCGTTGATCGTGCTGGCTACGATGAATTCATCCGCGAGCAGGTGATGCGCCGAAACCGGCGCTGCGCCGCCG CGTTCCGTATCGAGCGCCAGCAGCTTCAGGATTTGCCGGAGTACCGTACCACTGACTTCGTCGAGGAAGAGGCTCCTGTG ACCCGCTGCAGCACTTTTACGGTGCGCGGCATCCTCTACAGTGCGCCGTCGCGCCTGATTGGTCACCGGCTGAAGGTGCG CGTCTACGGCGACCGGCTCGACTGTTACCTGTCCGGCGTGCTGGTCCACAGCACCGCACGGGGCTCGCGTGCGCGCGACA ACCGCCACGCGCTTGATTACCGCCACTTCATTGACTCGCTGAAGCGCAAACCCCAGGCATTCAAGGGGCTCGCGTTTCGT GACGCGCTGTTCCCGCGTGATGCGTACCGCAGAACCTGGGAACAACTTGATGCCCGCCTGTCACAACGCGACGCATGCAA GACGATGGTCGGCCTGCTTGAGCTCGCGGGCCTGCACGGCGTGGAGGCCGTACTGGCCGGGCAGCTTGATGCAATGCTGG AAACCGGCGAGCTTCCCGATCTCAAGGCGCTGCGTGAGCAGTACGCACCCCGTGAGGCCCAGTGCCCCGATGTCGAGGTT CAGATGCCGCCCGTTGCCGTGTATGACGAACTGCTCAAGAAGGTGGCAGCATGA
Upstream 100 bases:
>100_bases GGAGGCGGCGTAGCCGCCGGAGACGACGAACCACCGGCGGCGCCGCGTCGGCGGGGCAATAGGATGGCTGATCGATTCTT AAAGAAGAAGCGGTCAGCAC
Downstream 100 bases:
>100_bases ACGCGCCCGCGCATGATGGTGGCCGCCTGGCCTTGATGCTCAACGAGCTGCGTTTGCCAACGATCGGTAGGTTGTGGCCC GAGTTCGCTGAGCGCTCGGA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSGTRITDQQVRLYMNKRKHHPQELAAAKAGISVRSARRIERDATLPSQKPQRSWRTRPDPFADVWDSEVVPLLRNAPHL MGITILRKLQDDHPGCYPDSMRRTLERRISQWRALEGPSQEIFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFEHRLYHF VLAFSRWEYACVVEGGESFEALANGLQNALWQAGGCPREHRTDSLSAAFKNLSEKEDFTTRYKALLDHYEMQGTRNNRGL GHENGSVESSHRYLKDAVDQALMLRGHRDFVDRAGYDEFIREQVMRRNRRCAAAFRIERQQLQDLPEYRTTDFVEEEAPV TRCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGVLVHSTARGSRARDNRHALDYRHFIDSLKRKPQAFKGLAFR DALFPRDAYRRTWEQLDARLSQRDACKTMVGLLELAGLHGVEAVLAGQLDAMLETGELPDLKALREQYAPREAQCPDVEV QMPPVAVYDELLKKVAA
Sequences:
>Translated_497_residues MSGTRITDQQVRLYMNKRKHHPQELAAAKAGISVRSARRIERDATLPSQKPQRSWRTRPDPFADVWDSEVVPLLRNAPHL MGITILRKLQDDHPGCYPDSMRRTLERRISQWRALEGPSQEIFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFEHRLYHF VLAFSRWEYACVVEGGESFEALANGLQNALWQAGGCPREHRTDSLSAAFKNLSEKEDFTTRYKALLDHYEMQGTRNNRGL GHENGSVESSHRYLKDAVDQALMLRGHRDFVDRAGYDEFIREQVMRRNRRCAAAFRIERQQLQDLPEYRTTDFVEEEAPV TRCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGVLVHSTARGSRARDNRHALDYRHFIDSLKRKPQAFKGLAFR DALFPRDAYRRTWEQLDARLSQRDACKTMVGLLELAGLHGVEAVLAGQLDAMLETGELPDLKALREQYAPREAQCPDVEV QMPPVAVYDELLKKVAA >Mature_496_residues SGTRITDQQVRLYMNKRKHHPQELAAAKAGISVRSARRIERDATLPSQKPQRSWRTRPDPFADVWDSEVVPLLRNAPHLM GITILRKLQDDHPGCYPDSMRRTLERRISQWRALEGPSQEIFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFEHRLYHFV LAFSRWEYACVVEGGESFEALANGLQNALWQAGGCPREHRTDSLSAAFKNLSEKEDFTTRYKALLDHYEMQGTRNNRGLG HENGSVESSHRYLKDAVDQALMLRGHRDFVDRAGYDEFIREQVMRRNRRCAAAFRIERQQLQDLPEYRTTDFVEEEAPVT RCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGVLVHSTARGSRARDNRHALDYRHFIDSLKRKPQAFKGLAFRD ALFPRDAYRRTWEQLDARLSQRDACKTMVGLLELAGLHGVEAVLAGQLDAMLETGELPDLKALREQYAPREAQCPDVEVQ MPPVAVYDELLKKVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 56948; Mature: 56817
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTRITDQQVRLYMNKRKHHPQELAAAKAGISVRSARRIERDATLPSQKPQRSWRTRPD CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHCCCCCC PFADVWDSEVVPLLRNAPHLMGITILRKLQDDHPGCYPDSMRRTLERRISQWRALEGPSQ CHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC EIFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFEHRLYHFVLAFSRWEYACVVEGGESFE CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHH ALANGLQNALWQAGGCPREHRTDSLSAAFKNLSEKEDFTTRYKALLDHYEMQGTRNNRGL HHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GHENGSVESSHRYLKDAVDQALMLRGHRDFVDRAGYDEFIREQVMRRNRRCAAAFRIERQ CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QLQDLPEYRTTDFVEEEAPVTRCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGV HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCEEEEEEECCHHHHHHHHH LVHSTARGSRARDNRHALDYRHFIDSLKRKPQAFKGLAFRDALFPRDAYRRTWEQLDARL HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH SQRDACKTMVGLLELAGLHGVEAVLAGQLDAMLETGELPDLKALREQYAPREAQCPDVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEE QMPPVAVYDELLKKVAA ECCCHHHHHHHHHHHCC >Mature Secondary Structure SGTRITDQQVRLYMNKRKHHPQELAAAKAGISVRSARRIERDATLPSQKPQRSWRTRPD CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHCCCCCC PFADVWDSEVVPLLRNAPHLMGITILRKLQDDHPGCYPDSMRRTLERRISQWRALEGPSQ CHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC EIFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFEHRLYHFVLAFSRWEYACVVEGGESFE CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHH ALANGLQNALWQAGGCPREHRTDSLSAAFKNLSEKEDFTTRYKALLDHYEMQGTRNNRGL HHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GHENGSVESSHRYLKDAVDQALMLRGHRDFVDRAGYDEFIREQVMRRNRRCAAAFRIERQ CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QLQDLPEYRTTDFVEEEAPVTRCSTFTVRGILYSAPSRLIGHRLKVRVYGDRLDCYLSGV HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCEEEEEEECCHHHHHHHHH LVHSTARGSRARDNRHALDYRHFIDSLKRKPQAFKGLAFRDALFPRDAYRRTWEQLDARL HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH SQRDACKTMVGLLELAGLHGVEAVLAGQLDAMLETGELPDLKALREQYAPREAQCPDVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEE QMPPVAVYDELLKKVAA ECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]