| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784014
Identifier: 91784014
GI number: 91784014
Start: 2933367
End: 2934890
Strand: Reverse
Name: 91784014
Synonym: Bxe_A1791
Alternate gene names: NA
Gene position: 2934890-2933367 (Counterclockwise)
Preceding gene: 91784015
Following gene: 91784013
Centisome position: 59.95
GC content: 60.24
Gene sequence:
>1524_bases ATGTACCAATACCGACAGATTCTGGTGCGCATGCGCCGAGGTGACTCTGACCGGGATATCGCACGATCGAAGACCATGGG GCGCAAGAAGATTGCGCAGGTGCGGGAGATTGCCGCCAGGAATGGATGGTTGGCGCGTGAAGCGGCCTTACCCGACGAAC ACGCAATGGCCGCTTTCCTGGATCGCAAGGAGGCGCCGCTACCATCGAGTTGCGTCTCAACTTTGGAACCGTGGCGGGAG CAGATCACCAAGTGGCGGGCAACCGGCGTTCAATGCACGACGATCCACGCCACGCTCGTTCGCAACCACGGATACGGCGG CAGCTATTCGTCGGTCTATCGTTTCCTTCTGCATATAGACGCATCGCACACGCCCGACGTGCCGCTGCGCCTGGAATTCA AGCCGGCCGAAGCGGCACAGGTTGATTTCGGCGCCGGTCCGATGATGACCGATGCGCTCACCGGCGAGATCCACAAGACG TGGTTCTTCGTCATGACCCTGGCCTGGTCGCGCCACCAATATGTTGAGTTCGTCCGGGACCAAACGGTAGCGACCTGGCT GGGATGTCACCGGCGCGCGTTCGAGGCATTTGGTGGGGTGCCGGCTCGGGTCATCATCGACAATTGTAAATGTGCGATCA CGCGCGCGTGCTATTACGAGCCCGAGGTGCAACGCGCGTACGGCGAGTGCGCAGAAGGATACGGTTTCAAGATTGATGCT TGTCCGCCGAGGGATCCACAAAAAAAGGGAATCGTGGAATCGGGCGTCAAATTTGTGAAGCGAAGCTTCTTGCCCTTGCG CGACTTTCGTGGCTTGGCTGACGCCAATCGCCAGGTACACGCGTGGGTAATGAACGAAGCCGGCAACCGCATCCACGGTA CGACTCGCGAGATGCCGCTCAGGCGCTTCGCGGAAGTTGAACGAAGCCTGCTGATCAGTTTGCCGGACGTGCCGCCGGAG CTCGCCGTGTGGGCGAAGACCAAGGTGCACCGCGACGCTCATGTCCAGTTCGAGCAGAGTTTTTACTCGGTCCCGTATAG GCTGGTCGGCCAGGAACTGTGGCTCAAGGCGACCGACACCATGGTGACGCTGTATCGGGGGCAGGACTCGGTCGCAGCCC ACGTCCGTCTTACTCGCGCGGGCGGCCGTCGCACGGTAGACGATCACTTGCCCTCCGCTGCCCAAGCGTGGCAATTGCAG GACACTCAATGGTGCCTGGCAACTGCCGAGCAGATCGGACCCGCCTGCTACGCCTTGGTCCACGCGCTCTTCGGCGACAA GGTCCTGATCAAGATGCGTTCGGTGCAAGGCGTGTTGCGACTCAAAGAGAAATATGGCGCGGTCCGACTCGAAGCAGCTT GTTCGCGCGCCAACCACTACGGCACGCCGCACTACACGGCGGTTAAAACGATCCTGCAAAAGGGATTGGATCAGCTGACG CTGTTGAACGCCTTTGATGCGCTGGCGAGCACCTACACCGAAGGGGGCCGCTTCTGCCGCAACACACAAACCATTCTTCA ATAA
Upstream 100 bases:
>100_bases GCGCCACCCGGGCGACGAGTACAGAGGGTTCGAACTTTCGTTGATCGGCTAGACTGCCGGCCTTTTGCCGGGAGAGGCCG TGGCTAATCGGAGGTTTGAG
Downstream 100 bases:
>100_bases GGCCGGCCATGCATCCCATTCCTGAACTGACTCCGCTGCTTAAACAACTTCGCTTGTCCGGCATCCTCGATTCCCTGGAA GCGCGAAACCGCGAGGCAAT
Product: putative transposase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MYQYRQILVRMRRGDSDRDIARSKTMGRKKIAQVREIAARNGWLAREAALPDEHAMAAFLDRKEAPLPSSCVSTLEPWRE QITKWRATGVQCTTIHATLVRNHGYGGSYSSVYRFLLHIDASHTPDVPLRLEFKPAEAAQVDFGAGPMMTDALTGEIHKT WFFVMTLAWSRHQYVEFVRDQTVATWLGCHRRAFEAFGGVPARVIIDNCKCAITRACYYEPEVQRAYGECAEGYGFKIDA CPPRDPQKKGIVESGVKFVKRSFLPLRDFRGLADANRQVHAWVMNEAGNRIHGTTREMPLRRFAEVERSLLISLPDVPPE LAVWAKTKVHRDAHVQFEQSFYSVPYRLVGQELWLKATDTMVTLYRGQDSVAAHVRLTRAGGRRTVDDHLPSAAQAWQLQ DTQWCLATAEQIGPACYALVHALFGDKVLIKMRSVQGVLRLKEKYGAVRLEAACSRANHYGTPHYTAVKTILQKGLDQLT LLNAFDALASTYTEGGRFCRNTQTILQ
Sequences:
>Translated_507_residues MYQYRQILVRMRRGDSDRDIARSKTMGRKKIAQVREIAARNGWLAREAALPDEHAMAAFLDRKEAPLPSSCVSTLEPWRE QITKWRATGVQCTTIHATLVRNHGYGGSYSSVYRFLLHIDASHTPDVPLRLEFKPAEAAQVDFGAGPMMTDALTGEIHKT WFFVMTLAWSRHQYVEFVRDQTVATWLGCHRRAFEAFGGVPARVIIDNCKCAITRACYYEPEVQRAYGECAEGYGFKIDA CPPRDPQKKGIVESGVKFVKRSFLPLRDFRGLADANRQVHAWVMNEAGNRIHGTTREMPLRRFAEVERSLLISLPDVPPE LAVWAKTKVHRDAHVQFEQSFYSVPYRLVGQELWLKATDTMVTLYRGQDSVAAHVRLTRAGGRRTVDDHLPSAAQAWQLQ DTQWCLATAEQIGPACYALVHALFGDKVLIKMRSVQGVLRLKEKYGAVRLEAACSRANHYGTPHYTAVKTILQKGLDQLT LLNAFDALASTYTEGGRFCRNTQTILQ >Mature_507_residues MYQYRQILVRMRRGDSDRDIARSKTMGRKKIAQVREIAARNGWLAREAALPDEHAMAAFLDRKEAPLPSSCVSTLEPWRE QITKWRATGVQCTTIHATLVRNHGYGGSYSSVYRFLLHIDASHTPDVPLRLEFKPAEAAQVDFGAGPMMTDALTGEIHKT WFFVMTLAWSRHQYVEFVRDQTVATWLGCHRRAFEAFGGVPARVIIDNCKCAITRACYYEPEVQRAYGECAEGYGFKIDA CPPRDPQKKGIVESGVKFVKRSFLPLRDFRGLADANRQVHAWVMNEAGNRIHGTTREMPLRRFAEVERSLLISLPDVPPE LAVWAKTKVHRDAHVQFEQSFYSVPYRLVGQELWLKATDTMVTLYRGQDSVAAHVRLTRAGGRRTVDDHLPSAAQAWQLQ DTQWCLATAEQIGPACYALVHALFGDKVLIKMRSVQGVLRLKEKYGAVRLEAACSRANHYGTPHYTAVKTILQKGLDQLT LLNAFDALASTYTEGGRFCRNTQTILQ
Specific function: Unknown
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 57330; Mature: 57330
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQYRQILVRMRRGDSDRDIARSKTMGRKKIAQVREIAARNGWLAREAALPDEHAMAAFL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCHHHHHHHH DRKEAPLPSSCVSTLEPWREQITKWRATGVQCTTIHATLVRNHGYGGSYSSVYRFLLHID HCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCC ASHTPDVPLRLEFKPAEAAQVDFGAGPMMTDALTGEIHKTWFFVMTLAWSRHQYVEFVRD CCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVATWLGCHRRAFEAFGGVPARVIIDNCKCAITRACYYEPEVQRAYGECAEGYGFKIDA HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEECC CPPRDPQKKGIVESGVKFVKRSFLPLRDFRGLADANRQVHAWVMNEAGNRIHGTTREMPL CCCCCCHHCCHHHHHHHHHHHHCCCHHHHCCHHHCCCEEEEEEECCCCCCCCCCHHHHHH RRFAEVERSLLISLPDVPPELAVWAKTKVHRDAHVQFEQSFYSVPYRLVGQELWLKATDT HHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEECCC MVTLYRGQDSVAAHVRLTRAGGRRTVDDHLPSAAQAWQLQDTQWCLATAEQIGPACYALV EEEEEECCCCEEEEEEEECCCCCCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH HALFGDKVLIKMRSVQGVLRLKEKYGAVRLEAACSRANHYGTPHYTAVKTILQKGLDQLT HHHHCCHHEEHHHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHH LLNAFDALASTYTEGGRFCRNTQTILQ HHHHHHHHHHHHHHCCHHHCCHHHHCC >Mature Secondary Structure MYQYRQILVRMRRGDSDRDIARSKTMGRKKIAQVREIAARNGWLAREAALPDEHAMAAFL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCHHHHHHHH DRKEAPLPSSCVSTLEPWREQITKWRATGVQCTTIHATLVRNHGYGGSYSSVYRFLLHID HCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCC ASHTPDVPLRLEFKPAEAAQVDFGAGPMMTDALTGEIHKTWFFVMTLAWSRHQYVEFVRD CCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVATWLGCHRRAFEAFGGVPARVIIDNCKCAITRACYYEPEVQRAYGECAEGYGFKIDA HHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCEEECC CPPRDPQKKGIVESGVKFVKRSFLPLRDFRGLADANRQVHAWVMNEAGNRIHGTTREMPL CCCCCCHHCCHHHHHHHHHHHHCCCHHHHCCHHHCCCEEEEEEECCCCCCCCCCHHHHHH RRFAEVERSLLISLPDVPPELAVWAKTKVHRDAHVQFEQSFYSVPYRLVGQELWLKATDT HHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEECCC MVTLYRGQDSVAAHVRLTRAGGRRTVDDHLPSAAQAWQLQDTQWCLATAEQIGPACYALV EEEEEECCCCEEEEEEEECCCCCCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH HALFGDKVLIKMRSVQGVLRLKEKYGAVRLEAACSRANHYGTPHYTAVKTILQKGLDQLT HHHHCCHHEEHHHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHH LLNAFDALASTYTEGGRFCRNTQTILQ HHHHHHHHHHHHHHCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]