| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784010
Identifier: 91784010
GI number: 91784010
Start: 2927207
End: 2928760
Strand: Direct
Name: 91784010
Synonym: Bxe_A1795
Alternate gene names: NA
Gene position: 2927207-2928760 (Clockwise)
Preceding gene: 91784009
Following gene: 91784011
Centisome position: 59.79
GC content: 62.93
Gene sequence:
>1554_bases ATGCCGGCTCACCGGACGACCATGCGCAAAATAAAAGATGTGCTTCGCCTGAAATGGACCTGTAATCTGTCTCACCGGCA GGTGAGCGGCGCGCTCGGCGTCGGGCTCGGTACCATTACCCAATATTTGCAGCTCGCCGCTTCGGCCGGCCTGGACTGGG CGAAGATCGAGCCGCTGTCTGAAGCAGAGCTGGAGCAGTTGCTCGTCAACGGTGCTGCTCCGACGACGGCCGCAGGCAAA CGCATAGAGCCAGACTGCGCCTGGATCCATCGGGAATTGCGCCGCAAAGGCGTGACGTTGCAGTTGCTGTGGGAAGAGTA CGTCGCCGCGAATCCCGGCCAGCGGACCTTGCGCTACACGCAGTTCTGCCAGCGATACAAGGACTGGGCCCAGACGTTGA AGCGGTCGATGCCCCAGCAACATTACGCCGGCGAGAAGTTGTTCGCCGACTACGCCGGGCAAACGGTGCCGATTCTCGAT CGCACCGGCGGCATTGCGTTCAAGGCACACATCTTCGTCGCAGTGCTCGGCGCATCGAATTACACGTATGCGTGCGCCAC GCGCTCGGAAGCGACGCCCGACTGGATCGGCGGCCTCATTGACGCGATGGAGTTCTATGGCGGCGTGCCAAGGTTGCTTG TGCCCGACAACCCGAAGGCACTGATCTCGAACGCCGACCGCTACGAACCCACGCTCGGCCTGACCACGCAAGACTTCGTG AGCCATTACGATACCGCGATGCTGCCCGCGCGCCCGCGCAAGCCGAAGGATAAGGCGAAGGTCGAGGTAGGCGTACAGAT CGTCGAACGCTGGATTCTCGCCCGCCTCCGGAATCACCGGTTCTACAGTCTGGCCGAACTGAACAAGGCGATCGCCGGGT TGATCAACGATCTGAATACGCGGCCCTTCAAGAAGCTCGAGGGCACTCGACGCGAGTGGTTCGAGCGGCTCGACAAACCG GCGCTGCGCCCGCTGCCGACGCGTCGCTACGAAATCGCCACCTTCCAGAAATGCCGCGTCAACATTGACTCGCACATCGA GGTCGACGGTCACTACTACAGCGCGCCTCACAGCCTTGTGCGTCAGGAAGTCCACGCGCGCGTGACGCGTTACGGTGTGG AAGTCTTGCACGGCGGCAAACGCGTCGCCACTCACGCTCGCAGTCGGCTCAAGGGGAAGTACACCACTGTGGCCGAGCAT ATGCCTGCGGCGTACCGTGCCCACCTGGAATGGACGCCGAGCCGGTTGCTGAACTGGGGCGCATCGATCGGCGTCAGCGC CGAGGCGATCGTCAGGCATTTGCTGACGAACCGTCCGCACCCGGAAATGGGATACCGCGCGTGCCTGGGTCTGCTGTCGC TCTCGCGCAAGTACGGCAAGGAGCGACTGGAGGCGGCGTGCCAGCGAGCACTCGTGATTGGCGCGCCGACCCAGCGGTCC GTGCGAACCATCCTGCAAACTGGCTCCGACAAGCAGCCGCTGCCACAAAGCGGGGCCATCGAATGGCAGTCGCCCCTGCA CGAGAATGTGCGAGGGCCCAAGTATTACCACTGA
Upstream 100 bases:
>100_bases GTTCGGTGGACCGAAACGAAAGGCGCGGTTTCGGTTGGCGGTACTGCGGATGGCTCAATCGGCCGGCGGTTAAGGTGGCT CCTTTTGGGAGAAACCGACG
Downstream 100 bases:
>100_bases CCTTAGGAGGTCACGATGTTGATGCAGCAAACCCTCTCCCAGCTCAAGGCCCTCAAGCTGGACGGTATGGCTCGCGCGTT CGAGGAACAGGCGGCGCTGA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGK RIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILD RTGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKP ALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEH MPAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH
Sequences:
>Translated_517_residues MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGK RIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILD RTGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKP ALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEH MPAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH >Mature_516_residues PAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGKR IEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDR TGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFVS HYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKPA LRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHM PAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRSV RTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017895 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 58386; Mature: 58255
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLS CCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCC EAELEQLLVNGAAPTTAAGKRIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYT HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHH QFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDRTGGIAFKAHIFVAVLGASN HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEECCCCEEEEHEEEEEEECCCC YTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHH SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC RPFKKLEGTRREWFERLDKPALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLV CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECCHHHHH RQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHMPAAYRAHLEWTPSRLLNWG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCHHHHHHCC ASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure PAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLS CCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCC EAELEQLLVNGAAPTTAAGKRIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYT HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHH QFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDRTGGIAFKAHIFVAVLGASN HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEECCCCEEEEHEEEEEEECCCC YTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHH SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC RPFKKLEGTRREWFERLDKPALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLV CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECCHHHHH RQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHMPAAYRAHLEWTPSRLLNWG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCHHHHHHCC ASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]