Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91784010

Identifier: 91784010

GI number: 91784010

Start: 2927207

End: 2928760

Strand: Direct

Name: 91784010

Synonym: Bxe_A1795

Alternate gene names: NA

Gene position: 2927207-2928760 (Clockwise)

Preceding gene: 91784009

Following gene: 91784011

Centisome position: 59.79

GC content: 62.93

Gene sequence:

>1554_bases
ATGCCGGCTCACCGGACGACCATGCGCAAAATAAAAGATGTGCTTCGCCTGAAATGGACCTGTAATCTGTCTCACCGGCA
GGTGAGCGGCGCGCTCGGCGTCGGGCTCGGTACCATTACCCAATATTTGCAGCTCGCCGCTTCGGCCGGCCTGGACTGGG
CGAAGATCGAGCCGCTGTCTGAAGCAGAGCTGGAGCAGTTGCTCGTCAACGGTGCTGCTCCGACGACGGCCGCAGGCAAA
CGCATAGAGCCAGACTGCGCCTGGATCCATCGGGAATTGCGCCGCAAAGGCGTGACGTTGCAGTTGCTGTGGGAAGAGTA
CGTCGCCGCGAATCCCGGCCAGCGGACCTTGCGCTACACGCAGTTCTGCCAGCGATACAAGGACTGGGCCCAGACGTTGA
AGCGGTCGATGCCCCAGCAACATTACGCCGGCGAGAAGTTGTTCGCCGACTACGCCGGGCAAACGGTGCCGATTCTCGAT
CGCACCGGCGGCATTGCGTTCAAGGCACACATCTTCGTCGCAGTGCTCGGCGCATCGAATTACACGTATGCGTGCGCCAC
GCGCTCGGAAGCGACGCCCGACTGGATCGGCGGCCTCATTGACGCGATGGAGTTCTATGGCGGCGTGCCAAGGTTGCTTG
TGCCCGACAACCCGAAGGCACTGATCTCGAACGCCGACCGCTACGAACCCACGCTCGGCCTGACCACGCAAGACTTCGTG
AGCCATTACGATACCGCGATGCTGCCCGCGCGCCCGCGCAAGCCGAAGGATAAGGCGAAGGTCGAGGTAGGCGTACAGAT
CGTCGAACGCTGGATTCTCGCCCGCCTCCGGAATCACCGGTTCTACAGTCTGGCCGAACTGAACAAGGCGATCGCCGGGT
TGATCAACGATCTGAATACGCGGCCCTTCAAGAAGCTCGAGGGCACTCGACGCGAGTGGTTCGAGCGGCTCGACAAACCG
GCGCTGCGCCCGCTGCCGACGCGTCGCTACGAAATCGCCACCTTCCAGAAATGCCGCGTCAACATTGACTCGCACATCGA
GGTCGACGGTCACTACTACAGCGCGCCTCACAGCCTTGTGCGTCAGGAAGTCCACGCGCGCGTGACGCGTTACGGTGTGG
AAGTCTTGCACGGCGGCAAACGCGTCGCCACTCACGCTCGCAGTCGGCTCAAGGGGAAGTACACCACTGTGGCCGAGCAT
ATGCCTGCGGCGTACCGTGCCCACCTGGAATGGACGCCGAGCCGGTTGCTGAACTGGGGCGCATCGATCGGCGTCAGCGC
CGAGGCGATCGTCAGGCATTTGCTGACGAACCGTCCGCACCCGGAAATGGGATACCGCGCGTGCCTGGGTCTGCTGTCGC
TCTCGCGCAAGTACGGCAAGGAGCGACTGGAGGCGGCGTGCCAGCGAGCACTCGTGATTGGCGCGCCGACCCAGCGGTCC
GTGCGAACCATCCTGCAAACTGGCTCCGACAAGCAGCCGCTGCCACAAAGCGGGGCCATCGAATGGCAGTCGCCCCTGCA
CGAGAATGTGCGAGGGCCCAAGTATTACCACTGA

Upstream 100 bases:

>100_bases
GTTCGGTGGACCGAAACGAAAGGCGCGGTTTCGGTTGGCGGTACTGCGGATGGCTCAATCGGCCGGCGGTTAAGGTGGCT
CCTTTTGGGAGAAACCGACG

Downstream 100 bases:

>100_bases
CCTTAGGAGGTCACGATGTTGATGCAGCAAACCCTCTCCCAGCTCAAGGCCCTCAAGCTGGACGGTATGGCTCGCGCGTT
CGAGGAACAGGCGGCGCTGA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGK
RIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILD
RTGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV
SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKP
ALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEH
MPAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS
VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH

Sequences:

>Translated_517_residues
MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGK
RIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILD
RTGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV
SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKP
ALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEH
MPAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS
VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH
>Mature_516_residues
PAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLSEAELEQLLVNGAAPTTAAGKR
IEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYTQFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDR
TGGIAFKAHIFVAVLGASNYTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFVS
HYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNTRPFKKLEGTRREWFERLDKPA
LRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLVRQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHM
PAAYRAHLEWTPSRLLNWGASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRSV
RTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58386; Mature: 58255

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLS
CCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCC
EAELEQLLVNGAAPTTAAGKRIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYT
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHH
QFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDRTGGIAFKAHIFVAVLGASN
HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEECCCCEEEEHEEEEEEECCCC
YTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHH
SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNT
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RPFKKLEGTRREWFERLDKPALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLV
CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECCHHHHH
RQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHMPAAYRAHLEWTPSRLLNWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCHHHHHHCC
ASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH
VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH
HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
PAHRTTMRKIKDVLRLKWTCNLSHRQVSGALGVGLGTITQYLQLAASAGLDWAKIEPLS
CCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCC
EAELEQLLVNGAAPTTAAGKRIEPDCAWIHRELRRKGVTLQLLWEEYVAANPGQRTLRYT
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHH
QFCQRYKDWAQTLKRSMPQQHYAGEKLFADYAGQTVPILDRTGGIAFKAHIFVAVLGASN
HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCEEEEEECCCCEEEEHEEEEEEECCCC
YTYACATRSEATPDWIGGLIDAMEFYGGVPRLLVPDNPKALISNADRYEPTLGLTTQDFV
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHH
SHYDTAMLPARPRKPKDKAKVEVGVQIVERWILARLRNHRFYSLAELNKAIAGLINDLNT
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
RPFKKLEGTRREWFERLDKPALRPLPTRRYEIATFQKCRVNIDSHIEVDGHYYSAPHSLV
CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECCHHHHH
RQEVHARVTRYGVEVLHGGKRVATHARSRLKGKYTTVAEHMPAAYRAHLEWTPSRLLNWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCHHHHHHCC
ASIGVSAEAIVRHLLTNRPHPEMGYRACLGLLSLSRKYGKERLEAACQRALVIGAPTQRS
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH
VRTILQTGSDKQPLPQSGAIEWQSPLHENVRGPKYYH
HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]