| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is adh [H]
Identifier: 91783951
GI number: 91783951
Start: 2864847
End: 2865887
Strand: Reverse
Name: adh [H]
Synonym: Bxe_A1860
Alternate gene names: 91783951
Gene position: 2865887-2864847 (Counterclockwise)
Preceding gene: 91783952
Following gene: 91783946
Centisome position: 58.54
GC content: 62.73
Gene sequence:
>1041_bases ATGAAAGCACTCGTGTATCACGGTCCCGGAAAGAAGTCGCTCGACGAGCGGCCCATGCCGCAACTCGCCAGCGCCACCGA CGCCATCGTCAAGGTGACGCGCACGACGATCTGCGGTACCGATCTTCACATTCTGAAGGGCGACGTGCCCACGTGCCAGC CCGGCCGCATTCTGGGTCACGAAGGAGTGGGCATCGTGCAGCAGGTCGGCGCCGCGGTCAGTTCGTTGAAAGAGGGCGAT CACGTGCTGATCTCGTGCATCTCCGCATGCGGCAAGTGCGATTATTGCCGGCGCGGCATGTATTCGCACTGCACGACCGG CGGCTGGATTCTCGGCAACCGTATCGACGGCACGCAAGCCGAATATGTGCGCATTCCGCATGCGGAGACGAGTCTTTATC CGATTCCCGCCGGTGCCGACGAAGAAGCGCTGGTGATGCTGTCCGACATCCTGCCGACCGGCTTCGAATGCGGCGTCCTC AACGGCAAGGTGCAGCCGGGCAGCGCCGTGGCGATTGTCGGCGCCGGGCCGATCGGACTGGCTTCGCTGCTCACCGCGCA GTTCTATTCGCCGGCCCAGATCATCATGATCGATCGCGACGAGCGCCGGCTCGAAGTGGCGAGCCGTTTCGGCGCGACCG CGTGTATCGACAGCCGGGTGGCCGAACCGGTCGTGGAGGTGATGAAGCTTACCGGGCACGTCGGTGTGGATTGCGCGATC GAGGCCGTGGGCGTGCCCGACACCTTCGAGTTGTGCCAGGCGCTGGTTGCGCCCGGTGGTGTGATCGCCAATATCGGCGT GCATGGGGTGAAGGCGGATCTGCATCTGGAATCGCTGTGGGATCGCAACATTTCCATTACGACGCGCCTCGTCGATACCG TCAGTACACCGATGTTGCTGAAGACGGTGCAATCCGGCCGGATCGATCCGGCCAGACTCATCACCCATCATTTCCAGCTG GACGACGTGTTGAACGCCTACGATACCTTCGGCCGCGCGGCGGATTCGCATGCGTTGAAGGTGATCATCGAGATGTCGTG A
Upstream 100 bases:
>100_bases GGTACTGCTGATCCGTGAAGAGGCGAAGACGGAGCATGACACCCCGGCCTGAGCGTGATGCCTGTCTCGCTGCGGCCTTG ACTGACCAATGAGGTAATCC
Downstream 100 bases:
>100_bases CGTAACAGCGGGCGGCGCCGCGTCGAGCGCCTGGCGGCGCGATGCAAACGCAGTAAAGCCCGCCGCAAAGCCCGCTAAAT TCGTGTGCCGCAGCGCCGCC
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKALVYHGPGKKSLDERPMPQLASATDAIVKVTRTTICGTDLHILKGDVPTCQPGRILGHEGVGIVQQVGAAVSSLKEGD HVLISCISACGKCDYCRRGMYSHCTTGGWILGNRIDGTQAEYVRIPHAETSLYPIPAGADEEALVMLSDILPTGFECGVL NGKVQPGSAVAIVGAGPIGLASLLTAQFYSPAQIIMIDRDERRLEVASRFGATACIDSRVAEPVVEVMKLTGHVGVDCAI EAVGVPDTFELCQALVAPGGVIANIGVHGVKADLHLESLWDRNISITTRLVDTVSTPMLLKTVQSGRIDPARLITHHFQL DDVLNAYDTFGRAADSHALKVIIEMS
Sequences:
>Translated_346_residues MKALVYHGPGKKSLDERPMPQLASATDAIVKVTRTTICGTDLHILKGDVPTCQPGRILGHEGVGIVQQVGAAVSSLKEGD HVLISCISACGKCDYCRRGMYSHCTTGGWILGNRIDGTQAEYVRIPHAETSLYPIPAGADEEALVMLSDILPTGFECGVL NGKVQPGSAVAIVGAGPIGLASLLTAQFYSPAQIIMIDRDERRLEVASRFGATACIDSRVAEPVVEVMKLTGHVGVDCAI EAVGVPDTFELCQALVAPGGVIANIGVHGVKADLHLESLWDRNISITTRLVDTVSTPMLLKTVQSGRIDPARLITHHFQL DDVLNAYDTFGRAADSHALKVIIEMS >Mature_346_residues MKALVYHGPGKKSLDERPMPQLASATDAIVKVTRTTICGTDLHILKGDVPTCQPGRILGHEGVGIVQQVGAAVSSLKEGD HVLISCISACGKCDYCRRGMYSHCTTGGWILGNRIDGTQAEYVRIPHAETSLYPIPAGADEEALVMLSDILPTGFECGVL NGKVQPGSAVAIVGAGPIGLASLLTAQFYSPAQIIMIDRDERRLEVASRFGATACIDSRVAEPVVEVMKLTGHVGVDCAI EAVGVPDTFELCQALVAPGGVIANIGVHGVKADLHLESLWDRNISITTRLVDTVSTPMLLKTVQSGRIDPARLITHHFQL DDVLNAYDTFGRAADSHALKVIIEMS
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=348, Percent_Identity=25.2873563218391, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI4501929, Length=245, Percent_Identity=31.8367346938775, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI4501939, Length=357, Percent_Identity=27.7310924369748, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI156523966, Length=357, Percent_Identity=27.7310924369748, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI34577061, Length=245, Percent_Identity=31.4285714285714, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI71565154, Length=333, Percent_Identity=27.3273273273273, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4501933, Length=246, Percent_Identity=30.0813008130081, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI71743840, Length=236, Percent_Identity=30.5084745762712, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI262073058, Length=236, Percent_Identity=30.5084745762712, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI71565152, Length=332, Percent_Identity=24.3975903614458, Blast_Score=92, Evalue=7e-19, Organism=Escherichia coli, GI1786825, Length=377, Percent_Identity=30.2387267904509, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1787863, Length=347, Percent_Identity=28.2420749279539, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1788073, Length=325, Percent_Identity=29.8461538461538, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786552, Length=336, Percent_Identity=30.0595238095238, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788075, Length=358, Percent_Identity=25.6983240223464, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87082125, Length=334, Percent_Identity=27.8443113772455, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1790045, Length=322, Percent_Identity=28.8819875776398, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI226510992, Length=333, Percent_Identity=25.2252252252252, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1790718, Length=324, Percent_Identity=25.6172839506173, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788407, Length=279, Percent_Identity=27.5985663082437, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87081918, Length=207, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17562876, Length=347, Percent_Identity=25.9365994236311, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562878, Length=348, Percent_Identity=27.0114942528736, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25146526, Length=341, Percent_Identity=29.0322580645161, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71997431, Length=346, Percent_Identity=28.3236994219653, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17565904, Length=338, Percent_Identity=28.4023668639053, Blast_Score=100, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319258, Length=302, Percent_Identity=28.8079470198675, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322619, Length=352, Percent_Identity=26.1363636363636, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=352, Percent_Identity=26.1363636363636, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320033, Length=338, Percent_Identity=26.3313609467456, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323099, Length=340, Percent_Identity=25.2941176470588, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319257, Length=373, Percent_Identity=23.8605898123324, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=236, Percent_Identity=29.6610169491525, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323961, Length=263, Percent_Identity=27.7566539923954, Blast_Score=66, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323729, Length=271, Percent_Identity=25.4612546125461, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI17137530, Length=350, Percent_Identity=30.2857142857143, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17737897, Length=351, Percent_Identity=30.7692307692308, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI17737895, Length=333, Percent_Identity=27.027027027027, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI45550770, Length=325, Percent_Identity=23.3846153846154, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI221457811, Length=325, Percent_Identity=23.3846153846154, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45551930, Length=325, Percent_Identity=23.3846153846154, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36754; Mature: 36754
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALVYHGPGKKSLDERPMPQLASATDAIVKVTRTTICGTDLHILKGDVPTCQPGRILGH CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEECC EGVGIVQQVGAAVSSLKEGDHVLISCISACGKCDYCRRGMYSHCTTGGWILGNRIDGTQA CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCEEECCCCCCCCC EYVRIPHAETSLYPIPAGADEEALVMLSDILPTGFECGVLNGKVQPGSAVAIVGAGPIGL EEEECCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCHHH ASLLTAQFYSPAQIIMIDRDERRLEVASRFGATACIDSRVAEPVVEVMKLTGHVGVDCAI HHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE EAVGVPDTFELCQALVAPGGVIANIGVHGVKADLHLESLWDRNISITTRLVDTVSTPMLL EECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEEEHHHHHCCCCEEEHHHHHHHCCHHHH KTVQSGRIDPARLITHHFQLDDVLNAYDTFGRAADSHALKVIIEMS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC >Mature Secondary Structure MKALVYHGPGKKSLDERPMPQLASATDAIVKVTRTTICGTDLHILKGDVPTCQPGRILGH CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEECC EGVGIVQQVGAAVSSLKEGDHVLISCISACGKCDYCRRGMYSHCTTGGWILGNRIDGTQA CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCEEECCCCCCCCC EYVRIPHAETSLYPIPAGADEEALVMLSDILPTGFECGVLNGKVQPGSAVAIVGAGPIGL EEEECCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCHHH ASLLTAQFYSPAQIIMIDRDERRLEVASRFGATACIDSRVAEPVVEVMKLTGHVGVDCAI HHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE EAVGVPDTFELCQALVAPGGVIANIGVHGVKADLHLESLWDRNISITTRLVDTVSTPMLL EECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEEEHHHHHCCCCEEEHHHHHHHCCHHHH KTVQSGRIDPARLITHHFQLDDVLNAYDTFGRAADSHALKVIIEMS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2846513 [H]