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The map label for this gene is atpD1

Identifier: 91783932

GI number: 91783932

Start: 2844789

End: 2846279

Strand: Reverse

Name: atpD1

Synonym: Bxe_A1879

Alternate gene names: 91783932

Gene position: 2846279-2844789 (Counterclockwise)

Preceding gene: 91783938

Following gene: 91783931

Centisome position: 58.14

GC content: 67.07

Gene sequence:

>1491_bases
ATGCCGAGTCATTCAGCAGCAGCGTTTTCAGCAACTCCGTCGGCTGCACGGGATGGCTACGTTGTTGCCGTGCGCGGCGC
GATCGTCGACGTCAGGTTCGAGCGTGATGCGCTGCCCGCCGTCGGCGATGCGCTCGTCGTCACGCCTGACGATCTCGCGC
CGGTGCTCGCCGAGGTCCAGGCGCATCTGAGCGAAACAATGGTGCGCGCACTGGCCTTGCAGACCACGGCCGGGTTGCGG
CGCGGCACGCGCGTGCAGGCCCCCGGCGGTCCGATTGAAACGCCGGTCGGCGAAGCGGTGCTCGGCCGGCTGCTCGACGT
AACCGGTGCGACGCGCGACGACGGCCCGGCGCTTCCCGCGCAGATCGAGCGTCGCCCGATTCATCGCGCGGCGCCGCCGC
TGGCGTCGCTCAAGGGCACCAGTACGCTGTTCTCGACCGGCATCAAGGTGATCGATCTGCTCGCGCCGCTCGCCCAGGGC
GGCAAGGCGGCCATGTTCGGCGGCGCCGGAGTCGGCAAGACCGTGCTGGTGATGGAACTGATTCATGCAGTGGTCGAGCG
TTACGAAGGTATCTCGGTGTTCGCCGGTGTCGGCGAACGCTCGCGCGAAGGTCACGAGATGCTGCTCGACATGCGGACCT
CCGGCGTATTGCCGCGCACCGTACTGGTTTACGGACAGATGAACGAGCCGCCGGGCGCACGCTGGCGGGTGCCGTTCACG
GCGCTGACGATTGCCGAATACTTTCGCGACGAACGTCGGCAGAACGTCCTGTTGCTGATGGATAACGTGTTTCGCTTCGT
GCAGGCTGGCGCCGAAGTGTCGGGTCTGCTCGGGCGCATGCCGTCGCGAGTCGGCTACCAACCCACGCTGGCGACCGAAG
TCGCGAGTTTGCAGGAACGCATCGTGTCCGTGGGCGGTGTGTCGGTGACGGCGATCGAGGCGGTGTACGTGCCCGCCGAC
GACTTCACCGACCCCGCCGTGACCGCGATTGCGGCGCACCTGGACAGCATGGTCGTGCTGTCCCGCTCGATGGCGGCCGA
AGGCATGTATCCCGCCGTCGATCCGATTGCGTCGTCGTCGATCCTGCTCGATCCGCTGGTGGTGGGCGAAGAACATGCGG
CGGTCGCAACCGAAGTGCGCCGCATCATCGAGCATTACCGTGAGTTGCAGGATGTGATCTCGTTGCTGGGCGTGGAAGAA
CTGGGCGCCGAGGACCGCGCACTGGTCGGCCGCGCGCGCCGCCTGCAGCGCTTTCTGACCCAGCCGTTCGCAGTCACCGA
GGCGTTCACGGGCGAGCCCGGCCGCTCGGTCGCGCTCGCCGATACGATCGCCGGCTGTAAAGCGATTCTCGCGGGCGAGT
GCGATACGTGGCAGGAGAGTTCGTTGTACATGATCGGCACACTCGATGAAGGGCGCCAAAGGGAGGCGGCCGCCGCGCAG
CAGAGCACCGCGCAACAGGCTGCTCCCGCTGAAAAGGAGCCGGCGGCATGA

Upstream 100 bases:

>100_bases
TTCTCGCCTCTATCTCTCGGACATTTGATGAAAATCAGTTTTGTGGAGCATTCCAGGCATATCTTCTGGCTGTTCATACC
TTGCCGCGGAAGCCCCAACC

Downstream 100 bases:

>100_bases
GCAAGGATGCCTTGAGGCTCACCATCGCGACGCCGTCGCGAGTCTGGTTCGACGCTGTCGAAATCGTCTCGTTGCGGGCG
GAAGACGCAAGCGGTTCGTT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 1; F-ATPase subunit beta 1

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MPSHSAAAFSATPSAARDGYVVAVRGAIVDVRFERDALPAVGDALVVTPDDLAPVLAEVQAHLSETMVRALALQTTAGLR
RGTRVQAPGGPIETPVGEAVLGRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQG
GKAAMFGGAGVGKTVLVMELIHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTVLVYGQMNEPPGARWRVPFT
ALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLATEVASLQERIVSVGGVSVTAIEAVYVPAD
DFTDPAVTAIAAHLDSMVVLSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDVISLLGVEE
LGAEDRALVGRARRLQRFLTQPFAVTEAFTGEPGRSVALADTIAGCKAILAGECDTWQESSLYMIGTLDEGRQREAAAAQ
QSTAQQAAPAEKEPAA

Sequences:

>Translated_496_residues
MPSHSAAAFSATPSAARDGYVVAVRGAIVDVRFERDALPAVGDALVVTPDDLAPVLAEVQAHLSETMVRALALQTTAGLR
RGTRVQAPGGPIETPVGEAVLGRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQG
GKAAMFGGAGVGKTVLVMELIHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTVLVYGQMNEPPGARWRVPFT
ALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLATEVASLQERIVSVGGVSVTAIEAVYVPAD
DFTDPAVTAIAAHLDSMVVLSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDVISLLGVEE
LGAEDRALVGRARRLQRFLTQPFAVTEAFTGEPGRSVALADTIAGCKAILAGECDTWQESSLYMIGTLDEGRQREAAAAQ
QSTAQQAAPAEKEPAA
>Mature_495_residues
PSHSAAAFSATPSAARDGYVVAVRGAIVDVRFERDALPAVGDALVVTPDDLAPVLAEVQAHLSETMVRALALQTTAGLRR
GTRVQAPGGPIETPVGEAVLGRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQGG
KAAMFGGAGVGKTVLVMELIHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTVLVYGQMNEPPGARWRVPFTA
LTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLATEVASLQERIVSVGGVSVTAIEAVYVPADD
FTDPAVTAIAAHLDSMVVLSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDVISLLGVEEL
GAEDRALVGRARRLQRFLTQPFAVTEAFTGEPGRSVALADTIAGCKAILAGECDTWQESSLYMIGTLDEGRQREAAAAQQ
STAQQAAPAEKEPAA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=487, Percent_Identity=50.9240246406571, Blast_Score=468, Evalue=1e-132,
Organism=Homo sapiens, GI19913424, Length=324, Percent_Identity=28.3950617283951, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI19913426, Length=385, Percent_Identity=24.4155844155844, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI19913428, Length=376, Percent_Identity=24.2021276595745, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI50345984, Length=364, Percent_Identity=23.0769230769231, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4757810, Length=364, Percent_Identity=23.0769230769231, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI1790170, Length=456, Percent_Identity=53.5087719298246, Blast_Score=470, Evalue=1e-133,
Organism=Escherichia coli, GI1788251, Length=309, Percent_Identity=32.0388349514563, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI1790172, Length=404, Percent_Identity=23.5148514851485, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25144756, Length=480, Percent_Identity=50, Blast_Score=451, Evalue=1e-127,
Organism=Caenorhabditis elegans, GI17565854, Length=320, Percent_Identity=30, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17570191, Length=444, Percent_Identity=23.4234234234234, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17510931, Length=344, Percent_Identity=24.1279069767442, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71988080, Length=354, Percent_Identity=23.4463276836158, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71988063, Length=354, Percent_Identity=23.4463276836158, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71988074, Length=319, Percent_Identity=22.257053291536, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322581, Length=467, Percent_Identity=52.03426124197, Blast_Score=474, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6319603, Length=373, Percent_Identity=25.7372654155496, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6320016, Length=261, Percent_Identity=29.1187739463602, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6319370, Length=368, Percent_Identity=24.4565217391304, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24638766, Length=461, Percent_Identity=52.060737527115, Blast_Score=461, Evalue=1e-130,
Organism=Drosophila melanogaster, GI28574560, Length=463, Percent_Identity=51.4038876889849, Blast_Score=453, Evalue=1e-127,
Organism=Drosophila melanogaster, GI20129479, Length=320, Percent_Identity=30.3125, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24583992, Length=344, Percent_Identity=29.0697674418605, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24583988, Length=341, Percent_Identity=29.6187683284457, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583986, Length=341, Percent_Identity=29.6187683284457, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583984, Length=341, Percent_Identity=29.6187683284457, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281361666, Length=446, Percent_Identity=23.9910313901345, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646341, Length=446, Percent_Identity=23.9910313901345, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17136796, Length=446, Percent_Identity=23.9910313901345, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24658560, Length=364, Percent_Identity=23.6263736263736, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24638768, Length=93, Percent_Identity=47.3118279569892, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB1_BURXL (Q13XV3)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_559138.1
- ProteinModelPortal:   Q13XV3
- SMR:   Q13XV3
- GeneID:   4004785
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A1879
- HOGENOM:   HBG565875
- OMA:   AVHTFSH
- ProtClustDB:   PRK12597
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 52522; Mature: 52390

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHSAAAFSATPSAARDGYVVAVRGAIVDVRFERDALPAVGDALVVTPDDLAPVLAEVQ
CCCCCCCEECCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHH
AHLSETMVRALALQTTAGLRRGTRVQAPGGPIETPVGEAVLGRLLDVTGATRDDGPALPA
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
QIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMEL
HHHCCCCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
IHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTVLVYGQMNEPPGARWRVPFT
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCHH
ALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLATEVASLQER
HHHHHHHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHH
IVSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSMVVLSRSMAAEGMYPAVDPIASSS
HHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ILLDPLVVGEEHAAVATEVRRIIEHYRELQDVISLLGVEELGAEDRALVGRARRLQRFLT
EEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHC
QPFAVTEAFTGEPGRSVALADTIAGCKAILAGECDTWQESSLYMIGTLDEGRQREAAAAQ
CCHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
QSTAQQAAPAEKEPAA
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSHSAAAFSATPSAARDGYVVAVRGAIVDVRFERDALPAVGDALVVTPDDLAPVLAEVQ
CCCCCCEECCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHH
AHLSETMVRALALQTTAGLRRGTRVQAPGGPIETPVGEAVLGRLLDVTGATRDDGPALPA
HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH
QIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMEL
HHHCCCCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
IHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTVLVYGQMNEPPGARWRVPFT
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCHH
ALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLATEVASLQER
HHHHHHHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHH
IVSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSMVVLSRSMAAEGMYPAVDPIASSS
HHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ILLDPLVVGEEHAAVATEVRRIIEHYRELQDVISLLGVEELGAEDRALVGRARRLQRFLT
EEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHC
QPFAVTEAFTGEPGRSVALADTIAGCKAILAGECDTWQESSLYMIGTLDEGRQREAAAAQ
CCHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
QSTAQQAAPAEKEPAA
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA