| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is blc [C]
Identifier: 91783917
GI number: 91783917
Start: 2831844
End: 2832425
Strand: Direct
Name: blc [C]
Synonym: Bxe_A1894
Alternate gene names: 91783917
Gene position: 2831844-2832425 (Clockwise)
Preceding gene: 91783914
Following gene: 91783918
Centisome position: 57.84
GC content: 61.68
Gene sequence:
>582_bases ATGCACAAGTCAATTGCGTGCATCGCCTCGCTCGCCATCTTCCTCGCAGGATGCGCGCACGATCAGGCGGTCCCGCCGCA AGCACAAGCATCCCAGTCGGCATGTGTGGCAGGGCCGCCACTCGACCTCGAACGGTACATGGGACGCTGGTACGTCATCG CGGACACGCCGTTCCTGAGCGAGTCCGATTATGTGGGCAGCTATGACGAGTGGACGTTGCGCAACGACGGAAGCATCGAC GACAAATATCTCGGCCGTCGTCACGGTTTCGATCAGCCGGCCACCGGAAGCCAGTTCGTGGCGAAGGTGATGTCCGGAAC CGGCAACACGAAATGGCGAGTGGGATTGATCTGGCCATTCGAAGTGGTGGTCGTCACCGCCTATGTGGACCCCGACTATC GCTACACGATCCGCTGCATGGCCGACGGCAACATGCTGTGGGTACTCGCGCGCGAGCCGGTAATGGACGATGCCACTTAC GCCGGCATGCTCGCCCGGCTTGCCACTATGGGCTTCAACACTGACCGGCTACGCCGGGTTCCGCAAACCGCCGGGCAAAT CGGCCAACCCGGCTTTCAATGA
Upstream 100 bases:
>100_bases GCATCGCTGACAATCGCGGTTGAATACGCGGTTGAATAATCAGAATCATCACGTGTGTTGCGAACGTAGCCCAGCACGCC GGGCCAATCGGATAATCCTT
Downstream 100 bases:
>100_bases GCGTTGCGCGGCAACGGAACCAGCCGGGAACGCGCATGACAACCCTGCCTAGGCACGCGGCAACCGAAGCCGGCACGGCA CTTGATAATCGTGCTGACGC
Product: putative outer membrane lipoprotein, lipocalin Blc like
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Outer Membrane Lipoprotein Blc; Lipocalin-Like Domain-Containing Protein; Lipocalin-Like Domain; Outer Membrane Lipoprotein Lipocalin Blc Like; Lipocalin Protein; Lipocalin; Lipocalin-Like Protein; Exported Protein
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MHKSIACIASLAIFLAGCAHDQAVPPQAQASQSACVAGPPLDLERYMGRWYVIADTPFLSESDYVGSYDEWTLRNDGSID DKYLGRRHGFDQPATGSQFVAKVMSGTGNTKWRVGLIWPFEVVVVTAYVDPDYRYTIRCMADGNMLWVLAREPVMDDATY AGMLARLATMGFNTDRLRRVPQTAGQIGQPGFQ
Sequences:
>Translated_193_residues MHKSIACIASLAIFLAGCAHDQAVPPQAQASQSACVAGPPLDLERYMGRWYVIADTPFLSESDYVGSYDEWTLRNDGSID DKYLGRRHGFDQPATGSQFVAKVMSGTGNTKWRVGLIWPFEVVVVTAYVDPDYRYTIRCMADGNMLWVLAREPVMDDATY AGMLARLATMGFNTDRLRRVPQTAGQIGQPGFQ >Mature_193_residues MHKSIACIASLAIFLAGCAHDQAVPPQAQASQSACVAGPPLDLERYMGRWYVIADTPFLSESDYVGSYDEWTLRNDGSID DKYLGRRHGFDQPATGSQFVAKVMSGTGNTKWRVGLIWPFEVVVVTAYVDPDYRYTIRCMADGNMLWVLAREPVMDDATY AGMLARLATMGFNTDRLRRVPQTAGQIGQPGFQ
Specific function: May Serve A Starvation Response Function In E. Coli. [C]
COG id: COG3040
COG function: function code M; Bacterial lipocalin
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21351; Mature: 21351
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSIACIASLAIFLAGCAHDQAVPPQAQASQSACVAGPPLDLERYMGRWYVIADTPFLS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCC ESDYVGSYDEWTLRNDGSIDDKYLGRRHGFDQPATGSQFVAKVMSGTGNTKWRVGLIWPF CCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEE EVVVVTAYVDPDYRYTIRCMADGNMLWVLAREPVMDDATYAGMLARLATMGFNTDRLRRV HEEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHC PQTAGQIGQPGFQ HHHHHHCCCCCCC >Mature Secondary Structure MHKSIACIASLAIFLAGCAHDQAVPPQAQASQSACVAGPPLDLERYMGRWYVIADTPFLS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCC ESDYVGSYDEWTLRNDGSIDDKYLGRRHGFDQPATGSQFVAKVMSGTGNTKWRVGLIWPF CCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEE EVVVVTAYVDPDYRYTIRCMADGNMLWVLAREPVMDDATYAGMLARLATMGFNTDRLRRV HEEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHC PQTAGQIGQPGFQ HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA