| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is yddH [H]
Identifier: 91783895
GI number: 91783895
Start: 2811755
End: 2812288
Strand: Reverse
Name: yddH [H]
Synonym: Bxe_A1916
Alternate gene names: 91783895
Gene position: 2812288-2811755 (Counterclockwise)
Preceding gene: 91783896
Following gene: 91783894
Centisome position: 57.44
GC content: 61.42
Gene sequence:
>534_bases ATGAAAGAAGTACCGCTCGCGGAGGTCTACCAACTGCTCGAACCGGGGCCGGTCGTACTGCTCACGACGCGCCATAAGGA CCGTGCCAATGTCATGACGATGTCCTGGCACATGATGGTCGAATTCGTGCCGCCACTCGTGGCGTGCGTGGTGAGCCAGG CCGACTACAGTTTCGCCGCGTTGCGCGCAACGCGGGAGTGCGTCATCGCCATCCCGGCCGTGGAACTGGCCTCGGCCGTG GTCGAGATCGGCAATTGCAGCGGGCGCGAGATCGTCGATAAATTCGACGCTTCCGGTTTGACGCCGCTGCCGGCCGAATG CGTGGCTGCGCCACTTGTGGCGCAGTGCTTCGCGAACCTTGAATGCAAGGTGGTCGATACGCGGCTGGTGAACCGGTACA ACCTGTTCGTGGTGGAGGTGCTGAAAGCATGGCGAGATCCGCGGCAGCGTAATCCGAAGACCATCCACCACCGTGGATAC GGTGTATTCACGGTCGACGGCGAAACGATCCGGCTCAAATCGCGTATGCCATAG
Upstream 100 bases:
>100_bases GATTTCTGGCCGTCTCTACGCTTGTCACGATTGCCATGTTCGGGCGCATGCCGCAGAGGCGGGCCGTGCTGAAACGGGCG ACGGTCCGGCGCGGCGGACA
Downstream 100 bases:
>100_bases CGAACCTTCAGCCGGGCGCGTTGCCGTTCACCTGTCTGGGAGGAAGAGATGAAACATCTTGCCGTAGTAGCTCACCCCGT CGAAAACAGCTTCACGATGG
Product: putative flavin reductase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKEVPLAEVYQLLEPGPVVLLTTRHKDRANVMTMSWHMMVEFVPPLVACVVSQADYSFAALRATRECVIAIPAVELASAV VEIGNCSGREIVDKFDASGLTPLPAECVAAPLVAQCFANLECKVVDTRLVNRYNLFVVEVLKAWRDPRQRNPKTIHHRGY GVFTVDGETIRLKSRMP
Sequences:
>Translated_177_residues MKEVPLAEVYQLLEPGPVVLLTTRHKDRANVMTMSWHMMVEFVPPLVACVVSQADYSFAALRATRECVIAIPAVELASAV VEIGNCSGREIVDKFDASGLTPLPAECVAAPLVAQCFANLECKVVDTRLVNRYNLFVVEVLKAWRDPRQRNPKTIHHRGY GVFTVDGETIRLKSRMP >Mature_177_residues MKEVPLAEVYQLLEPGPVVLLTTRHKDRANVMTMSWHMMVEFVPPLVACVVSQADYSFAALRATRECVIAIPAVELASAV VEIGNCSGREIVDKFDASGLTPLPAECVAAPLVAQCFANLECKVVDTRLVNRYNLFVVEVLKAWRDPRQRNPKTIHHRGY GVFTVDGETIRLKSRMP
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
Organism=Escherichia coli, GI87081916, Length=181, Percent_Identity=30.3867403314917, Blast_Score=80, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 19692; Mature: 19692
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVPLAEVYQLLEPGPVVLLTTRHKDRANVMTMSWHMMVEFVPPLVACVVSQADYSFAA CCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHH LRATRECVIAIPAVELASAVVEIGNCSGREIVDKFDASGLTPLPAECVAAPLVAQCFANL HHHCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ECKVVDTRLVNRYNLFVVEVLKAWRDPRQRNPKTIHHRGYGVFTVDGETIRLKSRMP EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCEEEECCCCC >Mature Secondary Structure MKEVPLAEVYQLLEPGPVVLLTTRHKDRANVMTMSWHMMVEFVPPLVACVVSQADYSFAA CCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHH LRATRECVIAIPAVELASAVVEIGNCSGREIVDKFDASGLTPLPAECVAAPLVAQCFANL HHHCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ECKVVDTRLVNRYNLFVVEVLKAWRDPRQRNPKTIHHRGYGVFTVDGETIRLKSRMP EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]