| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pucI [H]
Identifier: 91783887
GI number: 91783887
Start: 2805071
End: 2806552
Strand: Reverse
Name: pucI [H]
Synonym: Bxe_A1924
Alternate gene names: 91783887
Gene position: 2806552-2805071 (Counterclockwise)
Preceding gene: 91783889
Following gene: 91783886
Centisome position: 57.33
GC content: 62.15
Gene sequence:
>1482_bases ATGGCTCAGTTCAGTGCAGCGCCCGGCAGTCCCGCAATTCCCGCTTACGCCGACGGCGGCGCGCCCGGCGATCCGTCGAT GCCGGCAGGCTACAGCGAGCGGCTCTATAACGAAGACCTCGCGCCGTTGCGCCATCAAACCTGGGGCGCCTACAACATCT TCGCGTTCTGGATGTCGGACGTGCACAGCGTCGGCGGCTATGTGTTCGCGGGCAGTCTGTTCGCGCTCGGCCTGACGAGC TGGCAGGTGCTGATCGCGCTGCTGGTCGGCATCACGATCGTGAACCTCTTGTGCAACCTGATCGCGAAGCCCAGCCAGGC GAACGGCGTACCTTATCCGGTCGCATGCCGCGCGACTTTCGGCGTGCTCGGCGCGAATATTCCCGCGGTGATTCGCGGCC TGATCGCGGTTGCGTGGTATGGCATTCAGACCTATCTGGCGTCGAGCGCGCTGGTGATCGTGGTGTTGAAGTTCGTTCCG CAGTTGCTGCCTTATGCCGATGTTCATCATCACGGCTTCATGGGGCTCTCCACGCTCGGCTGGGCCGGTTTCATGCTGCT GTGGGTCTTGCAGGCACTCGTGTTCTGGCACGGCATGGAGACCATCAAGAAGTTCATCGACTTTGCCGGGCCGGCCGTCT ACGTGGTGATGTTCATTCTCGCGGGCTACATGGTGTATCGCGCAGGGTGGCGCAACATCGGCATCAATCTGGGCGGTGTC AAATATCACGGCATGCAGGTCGTGCCGGTGATGATCACGGCGACTTCGCTGGTGGTGTCGTACTTCTCCGGACCCATGCT GAACTTCGGCGACTTTTCGCGCTACGGCAAGAGCTTTCGCAGCGTGCAGCGTGGCAACTTCTGGGGGCTGCCGGTCAACT TTCTGGCCTTCTCGCTGGTGACTGTGATCACGACCGCGGCCACGCTGCCGGTGTTCGGCGAGCTGATCACGGACCCGGTC GAAACCGTGGGCCGTATCGACTACCCGACCGCGGTGATTCTCGGCGCGCTGACCTTCACGATCGCGACGATCGGCATCAA CATCGTCGCCAATTTCGTCTCGCCCGCGTTCGACTTTTCCAATGTCGCGCCGCGCCTGATCAGCTGGCGCGCGGGCGGTA TGCTCGCGGCGGTGGCGTCGATCTTCATCACGCCGTGGAATCTGTTCAACAACCCGGCCGTGATTCACTACACGCTGGAC GTTCTCGGCAGCTTCATCGGACCTTTGTACGGTGTACTGATCGTCGATTACTACCTCGTGAAGCGTCAGAGAATCGTTCT CGACGATCTGTACACGGTCGCGCCCACCGGCTCGTACTGGTATCGCAACGGCGTGAACTATCGGGCCGTGGCCGCGCTGC TGCCGGCAGCCGTGATCGCGGTGATCTGCGTGATGGTGCCCTCGCTCGACGGTATGGCGAACTTCTCGTGGTTCATCGGC GCCGGGCTCGCCGCGCTGTTCTATCGCGTGATTGCACGCTGA
Upstream 100 bases:
>100_bases GCATGTCCTTTGTTCCGAGCGGACAGAGCGCGCGCGACTGGCATGGCCGATGCAACGTCCTTCGATTCGCTATCGATGGT CCCTATCCCAAGGAGGAATC
Downstream 100 bases:
>100_bases ATTTTGCAGATGCAACAGGAGTCGATATGCGCATCAAACTGATCAACCCGAATACCACGCAACGCATGACGGAGGCGATG GGCCGCTGCGCGCGTGAAGT
Product: NCS1 family nucleobase/cation symporter
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MAQFSAAPGSPAIPAYADGGAPGDPSMPAGYSERLYNEDLAPLRHQTWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTS WQVLIALLVGITIVNLLCNLIAKPSQANGVPYPVACRATFGVLGANIPAVIRGLIAVAWYGIQTYLASSALVIVVLKFVP QLLPYADVHHHGFMGLSTLGWAGFMLLWVLQALVFWHGMETIKKFIDFAGPAVYVVMFILAGYMVYRAGWRNIGINLGGV KYHGMQVVPVMITATSLVVSYFSGPMLNFGDFSRYGKSFRSVQRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITDPV ETVGRIDYPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASIFITPWNLFNNPAVIHYTLD VLGSFIGPLYGVLIVDYYLVKRQRIVLDDLYTVAPTGSYWYRNGVNYRAVAALLPAAVIAVICVMVPSLDGMANFSWFIG AGLAALFYRVIAR
Sequences:
>Translated_493_residues MAQFSAAPGSPAIPAYADGGAPGDPSMPAGYSERLYNEDLAPLRHQTWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTS WQVLIALLVGITIVNLLCNLIAKPSQANGVPYPVACRATFGVLGANIPAVIRGLIAVAWYGIQTYLASSALVIVVLKFVP QLLPYADVHHHGFMGLSTLGWAGFMLLWVLQALVFWHGMETIKKFIDFAGPAVYVVMFILAGYMVYRAGWRNIGINLGGV KYHGMQVVPVMITATSLVVSYFSGPMLNFGDFSRYGKSFRSVQRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITDPV ETVGRIDYPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASIFITPWNLFNNPAVIHYTLD VLGSFIGPLYGVLIVDYYLVKRQRIVLDDLYTVAPTGSYWYRNGVNYRAVAALLPAAVIAVICVMVPSLDGMANFSWFIG AGLAALFYRVIAR >Mature_492_residues AQFSAAPGSPAIPAYADGGAPGDPSMPAGYSERLYNEDLAPLRHQTWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTSW QVLIALLVGITIVNLLCNLIAKPSQANGVPYPVACRATFGVLGANIPAVIRGLIAVAWYGIQTYLASSALVIVVLKFVPQ LLPYADVHHHGFMGLSTLGWAGFMLLWVLQALVFWHGMETIKKFIDFAGPAVYVVMFILAGYMVYRAGWRNIGINLGGVK YHGMQVVPVMITATSLVVSYFSGPMLNFGDFSRYGKSFRSVQRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITDPVE TVGRIDYPTAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASIFITPWNLFNNPAVIHYTLDV LGSFIGPLYGVLIVDYYLVKRQRIVLDDLYTVAPTGSYWYRNGVNYRAVAALLPAAVIAVICVMVPSLDGMANFSWFIGA GLAALFYRVIAR
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=470, Percent_Identity=28.0851063829787, Blast_Score=191, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6319495, Length=448, Percent_Identity=25.4464285714286, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6322219, Length=452, Percent_Identity=24.1150442477876, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6319429, Length=483, Percent_Identity=24.6376811594203, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323266, Length=472, Percent_Identity=22.8813559322034, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324766, Length=472, Percent_Identity=21.8220338983051, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324645, Length=474, Percent_Identity=21.9409282700422, Blast_Score=104, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53366; Mature: 53235
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFSAAPGSPAIPAYADGGAPGDPSMPAGYSERLYNEDLAPLRHQTWGAYNIFAFWMSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHHH VHSVGGYVFAGSLFALGLTSWQVLIALLVGITIVNLLCNLIAKPSQANGVPYPVACRATF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH GVLGANIPAVIRGLIAVAWYGIQTYLASSALVIVVLKFVPQLLPYADVHHHGFMGLSTLG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHH WAGFMLLWVLQALVFWHGMETIKKFIDFAGPAVYVVMFILAGYMVYRAGWRNIGINLGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCEEECCE KYHGMQVVPVMITATSLVVSYFSGPMLNFGDFSRYGKSFRSVQRGNFWGLPVNFLAFSLV EECCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVITTAATLPVFGELITDPVETVGRIDYPTAVILGALTFTIATIGINIVANFVSPAFDFS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVAPRLISWRAGGMLAAVASIFITPWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDYYLV HHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH KRQRIVLDDLYTVAPTGSYWYRNGVNYRAVAALLPAAVIAVICVMVPSLDGMANFSWFIG HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AGLAALFYRVIAR HHHHHHHHHHHCC >Mature Secondary Structure AQFSAAPGSPAIPAYADGGAPGDPSMPAGYSERLYNEDLAPLRHQTWGAYNIFAFWMSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHHH VHSVGGYVFAGSLFALGLTSWQVLIALLVGITIVNLLCNLIAKPSQANGVPYPVACRATF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH GVLGANIPAVIRGLIAVAWYGIQTYLASSALVIVVLKFVPQLLPYADVHHHGFMGLSTLG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHH WAGFMLLWVLQALVFWHGMETIKKFIDFAGPAVYVVMFILAGYMVYRAGWRNIGINLGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCEEECCE KYHGMQVVPVMITATSLVVSYFSGPMLNFGDFSRYGKSFRSVQRGNFWGLPVNFLAFSLV EECCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TVITTAATLPVFGELITDPVETVGRIDYPTAVILGALTFTIATIGINIVANFVSPAFDFS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVAPRLISWRAGGMLAAVASIFITPWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDYYLV HHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH KRQRIVLDDLYTVAPTGSYWYRNGVNYRAVAALLPAAVIAVICVMVPSLDGMANFSWFIG HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AGLAALFYRVIAR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]