| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yufQ [H]
Identifier: 91783871
GI number: 91783871
Start: 2790072
End: 2791001
Strand: Reverse
Name: yufQ [H]
Synonym: Bxe_A1940
Alternate gene names: 91783871
Gene position: 2791001-2790072 (Counterclockwise)
Preceding gene: 91783872
Following gene: 91783870
Centisome position: 57.01
GC content: 67.85
Gene sequence:
>930_bases ATGGACATTCAACAAGCCAGCGCGCTCACCTCGAGCGCCGTCACCGCCGCGATTCCGCTGATGTTCGCGGGCGCGGGCGA ACTCGTCACCGAAAAGTCGGGCGTCCTCAACCTCGGTGTCGAAGGCATGATGCTGATGGGCGCGGTGAGCGGCTACGCGG TCACCGCGATCACCGGCAACCCGTGGCTCGGCGTGCTTGCCGCGATCGGCGCCGGTCTCGCGATGTCGCTGCTGTTCGCC TTTCTCACGCTCACCATGCTCGCCAACCAGGTCGCTACCGGCCTGTCGCTGACGATCTTCGGCATCGGCCTCTCGGCGTA TGTCGGCAAGCCCTACACGTCGGCCGCGGTGCGCGCGACCATCGACACGTGGACCATTCCCGGCCTCTCGAAGATTCCCG TGCTCGGGCCCGCACTGTTCAGCCTCACGCCGCTCGATTACCTCGCGTTCCTGATGTTCGCGGTGATCGGCTGGTTCCTG TATCGCACACGCGCGGGTCTGGTGCTGCGCTCGGTCGGCGAATCGCCGCAGGTGGCGCACTCGGTCGGCTTTCCGGTGGT GGGCGTGCGCTACGGCGCGGTGGCCTTCGGCGGCGGCATGGCCGGGCTCGCGGGCGGCTACTACTCGATCGTCAATCTGC ATTTGTGGCAGGAGCAGCTCACCTCGGGGCGCGGCTGGATCGCGCTCGCGCTGGTCGTGTTCGCGACGTGGCGCCCGGGG CGCCTGCTGATCGGCGCGCTGCTGTTCGGCGCCGTGACCGGCCTGCAGTTCTATGCGCAGGCGATCGGCGTGCCGGTGCC GACGCAATTCCTCGCCATGCTGCCGTACGTCGCGACGGTCGTCGTGCTGGTGCTGATTTCGCGCAACCCGAACACGATCC GGCTGAATGCGCCCGCCTCGCTGGGCAAACCGTTTTTCTCGGCGGGCTGA
Upstream 100 bases:
>100_bases GTGCCGATCTGTTCGTGAACTACCGTGTGCGCCGCCGGACGCTGGCCGCCCAGGTTCATTGATCCGCTCACTCACATTCA CTGATTTCCGCCGGATTCTC
Downstream 100 bases:
>100_bases CCGACCATCGACTCCGCTTTTCACATCATTCGATAAACACAACAGGAGAAAACATGAAGAGAAGAAATCTGCTGACCGCT TTCGCATGGGGCGCGGCCTC
Product: ABC transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG
Sequences:
>Translated_309_residues MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG >Mature_309_residues MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32073; Mature: 32073
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGN CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCEEEEEEECC PWLGVLAAIGAGLAMSLLFAFLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCHHHEEE IDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFLYRTRAGLVLRSVGESPQVAH ECCEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG HCCCCEEEEECCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPAS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH LGKPFFSAG HCCCCCCCC >Mature Secondary Structure MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGN CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCEEEEEEECC PWLGVLAAIGAGLAMSLLFAFLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCHHHEEE IDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFLYRTRAGLVLRSVGESPQVAH ECCEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG HCCCCEEEEECCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPAS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH LGKPFFSAG HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]