Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yufQ [H]

Identifier: 91783871

GI number: 91783871

Start: 2790072

End: 2791001

Strand: Reverse

Name: yufQ [H]

Synonym: Bxe_A1940

Alternate gene names: 91783871

Gene position: 2791001-2790072 (Counterclockwise)

Preceding gene: 91783872

Following gene: 91783870

Centisome position: 57.01

GC content: 67.85

Gene sequence:

>930_bases
ATGGACATTCAACAAGCCAGCGCGCTCACCTCGAGCGCCGTCACCGCCGCGATTCCGCTGATGTTCGCGGGCGCGGGCGA
ACTCGTCACCGAAAAGTCGGGCGTCCTCAACCTCGGTGTCGAAGGCATGATGCTGATGGGCGCGGTGAGCGGCTACGCGG
TCACCGCGATCACCGGCAACCCGTGGCTCGGCGTGCTTGCCGCGATCGGCGCCGGTCTCGCGATGTCGCTGCTGTTCGCC
TTTCTCACGCTCACCATGCTCGCCAACCAGGTCGCTACCGGCCTGTCGCTGACGATCTTCGGCATCGGCCTCTCGGCGTA
TGTCGGCAAGCCCTACACGTCGGCCGCGGTGCGCGCGACCATCGACACGTGGACCATTCCCGGCCTCTCGAAGATTCCCG
TGCTCGGGCCCGCACTGTTCAGCCTCACGCCGCTCGATTACCTCGCGTTCCTGATGTTCGCGGTGATCGGCTGGTTCCTG
TATCGCACACGCGCGGGTCTGGTGCTGCGCTCGGTCGGCGAATCGCCGCAGGTGGCGCACTCGGTCGGCTTTCCGGTGGT
GGGCGTGCGCTACGGCGCGGTGGCCTTCGGCGGCGGCATGGCCGGGCTCGCGGGCGGCTACTACTCGATCGTCAATCTGC
ATTTGTGGCAGGAGCAGCTCACCTCGGGGCGCGGCTGGATCGCGCTCGCGCTGGTCGTGTTCGCGACGTGGCGCCCGGGG
CGCCTGCTGATCGGCGCGCTGCTGTTCGGCGCCGTGACCGGCCTGCAGTTCTATGCGCAGGCGATCGGCGTGCCGGTGCC
GACGCAATTCCTCGCCATGCTGCCGTACGTCGCGACGGTCGTCGTGCTGGTGCTGATTTCGCGCAACCCGAACACGATCC
GGCTGAATGCGCCCGCCTCGCTGGGCAAACCGTTTTTCTCGGCGGGCTGA

Upstream 100 bases:

>100_bases
GTGCCGATCTGTTCGTGAACTACCGTGTGCGCCGCCGGACGCTGGCCGCCCAGGTTCATTGATCCGCTCACTCACATTCA
CTGATTTCCGCCGGATTCTC

Downstream 100 bases:

>100_bases
CCGACCATCGACTCCGCTTTTCACATCATTCGATAAACACAACAGGAGAAAACATGAAGAGAAGAAATCTGCTGACCGCT
TTCGCATGGGGCGCGGCCTC

Product: ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA
FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL
YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG
RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG

Sequences:

>Translated_309_residues
MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA
FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL
YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG
RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG
>Mature_309_residues
MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGNPWLGVLAAIGAGLAMSLLFA
FLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRATIDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFL
YRTRAGLVLRSVGESPQVAHSVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG
RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPASLGKPFFSAG

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32073; Mature: 32073

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGN
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCEEEEEEECC
PWLGVLAAIGAGLAMSLLFAFLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCHHHEEE
IDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFLYRTRAGLVLRSVGESPQVAH
ECCEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG
HCCCCEEEEECCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
LGKPFFSAG
HCCCCCCCC
>Mature Secondary Structure
MDIQQASALTSSAVTAAIPLMFAGAGELVTEKSGVLNLGVEGMMLMGAVSGYAVTAITGN
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCEEEEEEECC
PWLGVLAAIGAGLAMSLLFAFLTLTMLANQVATGLSLTIFGIGLSAYVGKPYTSAAVRAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCHHHEEE
IDTWTIPGLSKIPVLGPALFSLTPLDYLAFLMFAVIGWFLYRTRAGLVLRSVGESPQVAH
ECCEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SVGFPVVGVRYGAVAFGGGMAGLAGGYYSIVNLHLWQEQLTSGRGWIALALVVFATWRPG
HCCCCEEEEECCCEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
RLLIGALLFGAVTGLQFYAQAIGVPVPTQFLAMLPYVATVVVLVLISRNPNTIRLNAPAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH
LGKPFFSAG
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]