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The map label for this gene is yohF [C]

Identifier: 91783792

GI number: 91783792

Start: 2694759

End: 2695532

Strand: Reverse

Name: yohF [C]

Synonym: Bxe_A2020

Alternate gene names: 91783792

Gene position: 2695532-2694759 (Counterclockwise)

Preceding gene: 91783794

Following gene: 91783790

Centisome position: 55.06

GC content: 67.18

Gene sequence:

>774_bases
ATGTCGCGTATTTTTATTACCGGTTCCGCCGATGGCCTCGGTCAGATGGCCGCGCGTCTGCTCGTCGACGCCGGACATCA
GGTGGTGTTGCACGCGCGCAGCGCCGCGCGCGCCGAGCATGCGTTGCAAGCGGTGCCGCAAGCCGAAACGGCGCTGGTTG
CCGACCTGTCGAGCATTGCCGCCACGGCCGAACTCGCGCAGCAGGTCAACCGGCTAGGCCGTTTCGATGCGGTGATTCAC
AACGCGGCGGTCGGTTATCAGGAGCCGCGCCGGATCGCGACCGTCGACGGCCTGTCGCATGTGTTCGCGGTCAACACGCT
GGCGCCGTACATTCTGAGCGCATTGATCGGGAAGCCGAAACGGCTCGTCTATCTGAGCTCGGCGCTGCATCGCAGCGGCG
ATGCGAGCCTCGACGATCTGGCCTGGGAGCGGCGCCCCTGGCGGGGCACGGCGGCGTACTCGGACTCGAAACTGCATGAC
GCGTTGCTGGCGTTCGCGCTCGCGCGCCGCTGGCCGCAGGTGTTGTCGAACGCGCTGGAGCCGGGCTGGGTCGCGACGAA
AATGGGTGGACCGGGCGCACCGGACGATCTGCTGGCAGCGCCGAAAACCCAGGTGTGGCTTGCCGTCAGCGACGAGCCGG
CGGCCACCGTCAGCGGCGCGTACTTCTACCATATGAAGCCGCGCGAGACGCATCCGGCGGTGCACAACGTGGCTGTTCAG
GAGCGTCTGCTCGAAGCGTGCGCGGGCTTTTCCGGCATCCGTTTGCCGGACTGA

Upstream 100 bases:

>100_bases
CACGGCGCGCGTTAATCTGTACGAACCCGCCCGATGCACAAAGACATACGACTCTCGTCATGCATTGGGCATATTCGGAC
TGAATAACGGAGAGCGTCCC

Downstream 100 bases:

>100_bases
TGCAGAGGGCGGCGGCGCTCAGCGCCCCGCGCCTTGAGTCGCTTGCCCGCGCACCGTGCGCGAGGCAGGCGCTTCGTCGA
GATGACGAAACACCCAGGCC

Product: putative short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: Short Chain Dehydrogenase; Oxidoreductase; Dehydrogenase; Retinol Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Daunorubicin C-13 Ketoreductase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Light-Dependent Protochlorophyllide Reductase; Short-Chain Dehydrogenase/Reductase Family Oxidoreductase; FabG Protein; Short-Chain Dehydrogenase/Reductase Sdr; Dehydrogenase/Reductase; Short-Chain Dehydrogenase/Reductase; Carbonyl Reductase; Short-Chain Dehydrogenase; Short-Chain Dehydrogenase/Reductase Family Protein; Short-Chain Oxidoreductase; Alcohol Dehydrogenase; 3-Oxoacyl-(Acyl-Carrier Protein) Reductase Protein; Short Chain Dehydrogenase Family Protein; Dehydrogenase/Reductase Family Protein; Light-Dependent Protochlorophyllide Oxido-Reductase; Short-Chain Alcohol Dehydrogenase; Short-Chain Family Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; Oxidoreducatse Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Ketoreductase; Fis Family Transcriptional Regulator; Protochlorophyllide Reductase

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSRIFITGSADGLGQMAARLLVDAGHQVVLHARSAARAEHALQAVPQAETALVADLSSIAATAELAQQVNRLGRFDAVIH
NAAVGYQEPRRIATVDGLSHVFAVNTLAPYILSALIGKPKRLVYLSSALHRSGDASLDDLAWERRPWRGTAAYSDSKLHD
ALLAFALARRWPQVLSNALEPGWVATKMGGPGAPDDLLAAPKTQVWLAVSDEPAATVSGAYFYHMKPRETHPAVHNVAVQ
ERLLEACAGFSGIRLPD

Sequences:

>Translated_257_residues
MSRIFITGSADGLGQMAARLLVDAGHQVVLHARSAARAEHALQAVPQAETALVADLSSIAATAELAQQVNRLGRFDAVIH
NAAVGYQEPRRIATVDGLSHVFAVNTLAPYILSALIGKPKRLVYLSSALHRSGDASLDDLAWERRPWRGTAAYSDSKLHD
ALLAFALARRWPQVLSNALEPGWVATKMGGPGAPDDLLAAPKTQVWLAVSDEPAATVSGAYFYHMKPRETHPAVHNVAVQ
ERLLEACAGFSGIRLPD
>Mature_256_residues
SRIFITGSADGLGQMAARLLVDAGHQVVLHARSAARAEHALQAVPQAETALVADLSSIAATAELAQQVNRLGRFDAVIHN
AAVGYQEPRRIATVDGLSHVFAVNTLAPYILSALIGKPKRLVYLSSALHRSGDASLDDLAWERRPWRGTAAYSDSKLHDA
LLAFALARRWPQVLSNALEPGWVATKMGGPGAPDDLLAAPKTQVWLAVSDEPAATVSGAYFYHMKPRETHPAVHNVAVQE
RLLEACAGFSGIRLPD

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI225579078, Length=289, Percent_Identity=30.7958477508651, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI10190746, Length=284, Percent_Identity=30.2816901408451, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI19923931, Length=232, Percent_Identity=32.3275862068966, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI20129347, Length=272, Percent_Identity=26.8382352941176, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27519; Mature: 27387

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIFITGSADGLGQMAARLLVDAGHQVVLHARSAARAEHALQAVPQAETALVADLSSIA
CCEEEEEECCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ATAELAQQVNRLGRFDAVIHNAAVGYQEPRRIATVDGLSHVFAVNTLAPYILSALIGKPK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
RLVYLSSALHRSGDASLDDLAWERRPWRGTAAYSDSKLHDALLAFALARRWPQVLSNALE
HEEHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PGWVATKMGGPGAPDDLLAAPKTQVWLAVSDEPAATVSGAYFYHMKPRETHPAVHNVAVQ
CCEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCEECCEEEEEECCCCCCCHHHHHHHH
ERLLEACAGFSGIRLPD
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SRIFITGSADGLGQMAARLLVDAGHQVVLHARSAARAEHALQAVPQAETALVADLSSIA
CEEEEEECCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ATAELAQQVNRLGRFDAVIHNAAVGYQEPRRIATVDGLSHVFAVNTLAPYILSALIGKPK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
RLVYLSSALHRSGDASLDDLAWERRPWRGTAAYSDSKLHDALLAFALARRWPQVLSNALE
HEEHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PGWVATKMGGPGAPDDLLAAPKTQVWLAVSDEPAATVSGAYFYHMKPRETHPAVHNVAVQ
CCEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCEECCEEEEEECCCCCCCHHHHHHHH
ERLLEACAGFSGIRLPD
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA