| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tycC [H]
Identifier: 91783776
GI number: 91783776
Start: 2675147
End: 2676772
Strand: Reverse
Name: tycC [H]
Synonym: Bxe_A2036
Alternate gene names: 91783776
Gene position: 2676772-2675147 (Counterclockwise)
Preceding gene: 91783778
Following gene: 91783775
Centisome position: 54.67
GC content: 64.02
Gene sequence:
>1626_bases ATGCTGGATTCATTCTTCTTCGAGACCGCCGCGCGTGAGCCGGATCGTCCCGCGCTATGGGTGGACGAGCGCTCGTATTG CTACGACGAACTTGCTTCGCGAGCGGGCCGGATCGCGGCCGACGTATCTGCGGTGCTGCCGGCCGGCCGCGCGCGGCGCT GCCTGCTATTCGCGCATCGCAGCGTGGACGCTTACGCGGGTTTGCTAGGAATCCTCAACGCAGACTGCGCTTATGTACCG CTCAATCCCAACATGCCTGCGGCGCGTATTGCCGCCATAATCGAACAGTCGGACGCACCGGTCATGCTGGTTGACCGGCG TTGCGCCGCGCTGCTCGACGAGGTGGTGTCGCTGCTGGACGAATCGCCCAGGATCTTCCTGCTCGACGACGAAGAGGGCG AAGTCCAACAAGTCTCTCAGGACTCCGACGAAACGGCTCCGACCCGTGAAGTGTCGGCCGGCCGCGACCTGACACGGCTG CCAAGCGATCCGCTTGTGGCCGAAACCGTCATGCCTCGCGCGACGTGCGACGTGGCCTATATTCTGTTCACGTCAGGTTC GACCGGCGCACCCAAGGGCGTGCCCATCTCGCACGGGAATGCTTGTGCTTACGTGGCGGGGCAGTTGCATCTGATCGACA GGCTGCCGGGTGCCCGCTATATACAGTTATGCGAGCTTTCCTTCGATCCTTCGGTACACGACATGTTCGTGTGCTGGGCA AATGGCGCATGCCTGTACGTGCCGAAGACCGTCGAGCCGATCTACAACGCGGCCTTCATCAAGGAACACGCGATCACGCA CTGGAGCAGCGTGCCTTCGGGCGCCGCCTTCATGCAGCAGTTCCGCAAGCTGCAGCCGGACGAATTTCCCAGCCTGCGCG TGACGTTGTTCGGCGGAGAACCGTTGCCGCGTTTGCTGGTGCAAGCCTGGCTGCGCGCCGCGCCGAACAGCCGGGTGCTG AACATGTACGGGCCGACTGAAACGACGGTTGCGTGCACCGCATTCGAAGTCACCACGGAATTTCTCGCCGATCCGCGCCG CGCGGTCATGCCGCTTGGCCGCGCGTTGCCGGGCATGGAACTGTTGATCGTGGACGCCGCGCTCGAACCGGTCGCACCGG GCATCAGCGGCGAATTGCTGATTGGCGGTCCGCAGGTCGCTTCGGGTTATCTGTCGGCGGACGAGCCCGGCAATCGCCGT TTCATTTCGCGGATGTATCCGGGCCACAGCGCGTCGCGCTGGTATCGGAGCGCGGACGCCGCGCGCGAGGTGGCCGGCGA GGGCATCGTGTTTCAAGGCCGCCTGGATACGCAGATCAAGATTCGCGGCAATCGTATCGAGCTCGAAGAAGTCGAGCATG TCGTCAGGTCGTGCAGTCAGGCCGCGCTGTGCGCGGTTATCGCGTGGCCTGTGGATGAAGCGGGCCGCGCGGGTGGCCTG ATCGCTTTCGTGACGCAGGTGCAGGGCGGCGCGACGCAGATTCTGCAGGCGTGTCGTCAGCGCTTGCCCGCGTACGCCGT GCCGCAACGGGTCGTGATGCTGGACACGTTGCCGCTGAACGTCAATGGCAAGGTCGATAGAAGGGCGCTGGCCGGACAGT GTATGACCGGCGATGTATTCACCTGA
Upstream 100 bases:
>100_bases GCCCGGCAGCGTGCTGCCGGCATGGCTGGCAGCCACTCCGGCGCGCTCGAGCGACCGGTCCGGCGAGGCCGGCACGTTGC CCCATGCGTCGAGGCCGTGA
Downstream 100 bases:
>100_bases GCATCCCGCGGCGTGTCTCGTTGCACGTTCCTGACGGATCGGTGCCGTGTTGAAAAATCGAAGGATCGGGGGAATCACAA TGAAGACGCATGTACGCCGT
Product: non-ribosomal peptide synthase amino acid adenylation subunit
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: Tyrocidine synthase III; ATP-dependent asparagine adenylase; AsnA; Asparagine activase; ATP-dependent glutamine adenylase; GlnA; Glutamine activase; ATP-dependent tyrosine adenylase; TyrA; Tyrosine activase; ATP-dependent valine adenylase; ValA; Valine activase; ATP-dependent ornithine adenylase; OrnA; Ornithine activase; ATP-dependent leucine adenylase; LeuA; Leucine activase [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MLDSFFFETAAREPDRPALWVDERSYCYDELASRAGRIAADVSAVLPAGRARRCLLFAHRSVDAYAGLLGILNADCAYVP LNPNMPAARIAAIIEQSDAPVMLVDRRCAALLDEVVSLLDESPRIFLLDDEEGEVQQVSQDSDETAPTREVSAGRDLTRL PSDPLVAETVMPRATCDVAYILFTSGSTGAPKGVPISHGNACAYVAGQLHLIDRLPGARYIQLCELSFDPSVHDMFVCWA NGACLYVPKTVEPIYNAAFIKEHAITHWSSVPSGAAFMQQFRKLQPDEFPSLRVTLFGGEPLPRLLVQAWLRAAPNSRVL NMYGPTETTVACTAFEVTTEFLADPRRAVMPLGRALPGMELLIVDAALEPVAPGISGELLIGGPQVASGYLSADEPGNRR FISRMYPGHSASRWYRSADAAREVAGEGIVFQGRLDTQIKIRGNRIELEEVEHVVRSCSQAALCAVIAWPVDEAGRAGGL IAFVTQVQGGATQILQACRQRLPAYAVPQRVVMLDTLPLNVNGKVDRRALAGQCMTGDVFT
Sequences:
>Translated_541_residues MLDSFFFETAAREPDRPALWVDERSYCYDELASRAGRIAADVSAVLPAGRARRCLLFAHRSVDAYAGLLGILNADCAYVP LNPNMPAARIAAIIEQSDAPVMLVDRRCAALLDEVVSLLDESPRIFLLDDEEGEVQQVSQDSDETAPTREVSAGRDLTRL PSDPLVAETVMPRATCDVAYILFTSGSTGAPKGVPISHGNACAYVAGQLHLIDRLPGARYIQLCELSFDPSVHDMFVCWA NGACLYVPKTVEPIYNAAFIKEHAITHWSSVPSGAAFMQQFRKLQPDEFPSLRVTLFGGEPLPRLLVQAWLRAAPNSRVL NMYGPTETTVACTAFEVTTEFLADPRRAVMPLGRALPGMELLIVDAALEPVAPGISGELLIGGPQVASGYLSADEPGNRR FISRMYPGHSASRWYRSADAAREVAGEGIVFQGRLDTQIKIRGNRIELEEVEHVVRSCSQAALCAVIAWPVDEAGRAGGL IAFVTQVQGGATQILQACRQRLPAYAVPQRVVMLDTLPLNVNGKVDRRALAGQCMTGDVFT >Mature_541_residues MLDSFFFETAAREPDRPALWVDERSYCYDELASRAGRIAADVSAVLPAGRARRCLLFAHRSVDAYAGLLGILNADCAYVP LNPNMPAARIAAIIEQSDAPVMLVDRRCAALLDEVVSLLDESPRIFLLDDEEGEVQQVSQDSDETAPTREVSAGRDLTRL PSDPLVAETVMPRATCDVAYILFTSGSTGAPKGVPISHGNACAYVAGQLHLIDRLPGARYIQLCELSFDPSVHDMFVCWA NGACLYVPKTVEPIYNAAFIKEHAITHWSSVPSGAAFMQQFRKLQPDEFPSLRVTLFGGEPLPRLLVQAWLRAAPNSRVL NMYGPTETTVACTAFEVTTEFLADPRRAVMPLGRALPGMELLIVDAALEPVAPGISGELLIGGPQVASGYLSADEPGNRR FISRMYPGHSASRWYRSADAAREVAGEGIVFQGRLDTQIKIRGNRIELEEVEHVVRSCSQAALCAVIAWPVDEAGRAGGL IAFVTQVQGGATQILQACRQRLPAYAVPQRVVMLDTLPLNVNGKVDRRALAGQCMTGDVFT
Specific function: Incorporates six amino acids (for tyrocidine A, Asn, Gln, Tyr, Val, Orn, and Leu) in their L-configuration into the peptide product [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 6 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=558, Percent_Identity=24.7311827956989, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI28416953, Length=390, Percent_Identity=25.3846153846154, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI38505220, Length=561, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786801, Length=548, Percent_Identity=30.8394160583942, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1789201, Length=385, Percent_Identity=28.3116883116883, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788107, Length=554, Percent_Identity=22.7436823104693, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI145693145, Length=423, Percent_Identity=24.3498817966903, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786810, Length=442, Percent_Identity=23.7556561085973, Blast_Score=73, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17556356, Length=311, Percent_Identity=29.5819935691318, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560308, Length=361, Percent_Identity=27.7008310249307, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17531443, Length=454, Percent_Identity=24.0088105726872, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17550940, Length=353, Percent_Identity=21.8130311614731, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319591, Length=602, Percent_Identity=26.2458471760797, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319699, Length=360, Percent_Identity=23.0555555555556, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648676, Length=489, Percent_Identity=27.6073619631902, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859661, Length=365, Percent_Identity=27.9452054794521, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 58725; Mature: 58725
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSFFFETAAREPDRPALWVDERSYCYDELASRAGRIAADVSAVLPAGRARRCLLFAHR CCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECC SVDAYAGLLGILNADCAYVPLNPNMPAARIAAIIEQSDAPVMLVDRRCAALLDEVVSLLD CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHC ESPRIFLLDDEEGEVQQVSQDSDETAPTREVSAGRDLTRLPSDPLVAETVMPRATCDVAY CCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHCCCCHHCCCCCCCHHHHHCCCCCCCEEE ILFTSGSTGAPKGVPISHGNACAYVAGQLHLIDRLPGARYIQLCELSFDPSVHDMFVCWA EEEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEE NGACLYVPKTVEPIYNAAFIKEHAITHWSSVPSGAAFMQQFRKLQPDEFPSLRVTLFGGE CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC PLPRLLVQAWLRAAPNSRVLNMYGPTETTVACTAFEVTTEFLADPRRAVMPLGRALPGME CHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCE LLIVDAALEPVAPGISGELLIGGPQVASGYLSADEPGNRRFISRMYPGHSASRWYRSADA EEEEECHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH AREVAGEGIVFQGRLDTQIKIRGNRIELEEVEHVVRSCSQAALCAVIAWPVDEAGRAGGL HHHHCCCCEEEECCCCCEEEEECCEECHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCE IAFVTQVQGGATQILQACRQRLPAYAVPQRVVMLDTLPLNVNGKVDRRALAGQCMTGDVF EEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCC T C >Mature Secondary Structure MLDSFFFETAAREPDRPALWVDERSYCYDELASRAGRIAADVSAVLPAGRARRCLLFAHR CCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECC SVDAYAGLLGILNADCAYVPLNPNMPAARIAAIIEQSDAPVMLVDRRCAALLDEVVSLLD CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHC ESPRIFLLDDEEGEVQQVSQDSDETAPTREVSAGRDLTRLPSDPLVAETVMPRATCDVAY CCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHCCCCHHCCCCCCCHHHHHCCCCCCCEEE ILFTSGSTGAPKGVPISHGNACAYVAGQLHLIDRLPGARYIQLCELSFDPSVHDMFVCWA EEEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEE NGACLYVPKTVEPIYNAAFIKEHAITHWSSVPSGAAFMQQFRKLQPDEFPSLRVTLFGGE CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC PLPRLLVQAWLRAAPNSRVLNMYGPTETTVACTAFEVTTEFLADPRRAVMPLGRALPGME CHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCE LLIVDAALEPVAPGISGELLIGGPQVASGYLSADEPGNRRFISRMYPGHSASRWYRSADA EEEEECHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH AREVAGEGIVFQGRLDTQIKIRGNRIELEEVEHVVRSCSQAALCAVIAWPVDEAGRAGGL HHHHCCCCEEEECCCCCEEEEECCEECHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCE IAFVTQVQGGATQILQACRQRLPAYAVPQRVVMLDTLPLNVNGKVDRRALAGQCMTGDVF EEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9352938; 10801488 [H]