| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is srpC [H]
Identifier: 91783763
GI number: 91783763
Start: 2660183
End: 2660755
Strand: Reverse
Name: srpC [H]
Synonym: Bxe_A2051
Alternate gene names: 91783763
Gene position: 2660755-2660183 (Counterclockwise)
Preceding gene: 91783764
Following gene: 91783762
Centisome position: 54.35
GC content: 63.7
Gene sequence:
>573_bases ATGCAATCCGTGTCCGTGCGTAAAACGAATGACGTGTCGTTGCTGCAGATTCTTCTGTTGTTCGCGCGCGTCGGGCTCAC GAGTTTCGGCGGCGGCCTGTCCGCGTGGATCTATCGCGAAGTGGTGACGCAAAGAGGCTGGCTGGATGAAGATGAGTTCC TTGGGGCACTCACGCTCGGGCAGATCCTGCCCGGCTCGAACGTGATCAACCTGTCGATCTATGTCGGCTACCGCATGAAG GGTGCGATCGGCAGCACGGTTGCCGTGTCTTCGTTGCTCGTGCCGCCTATGGTGGTGATCGTTCTGCTCGCCACGGTGTT TCATCAGTTCGCGCAACTCGCGTGGCTGCATGAGTTTCTCGAAGGCGTGGCCGCCGCGGCGATCGGCATGACCGCTTCGG TGGGCTTTCGCACCGCACGCTCGCTGCTCGCGGTACGACGCTGGCCGCTTGCGCTGATCGCCGTGGTCTTCGTCGCGGTC GGCGTGCTGCGCTGGCCACTCGTGCCGGTCGCACTGGTGGCGGGAGCCGCCGGGTTGTACCTCGCCTCCAGGAGCCGTCA CGGTGCGCGATAA
Upstream 100 bases:
>100_bases TCGGCTGGCGAACGAGCGGCATTGACGCCACCTGAGTTTTATCCGTGCGGCAGCGCCGGCTGCCTCCGTCGCGACAGGTA ACAGCAAGGAGTCAGCCTGC
Downstream 100 bases:
>100_bases CATCTACCTGCAACTGATCGCCGTATTCGCGCCGCTGTCGTTGCTGTCGCTGGGCGGCGGACAAAGTATCGTCGCCGATA TCAACCAGCAGGCCGTTGCA
Product: chromate efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MQSVSVRKTNDVSLLQILLLFARVGLTSFGGGLSAWIYREVVTQRGWLDEDEFLGALTLGQILPGSNVINLSIYVGYRMK GAIGSTVAVSSLLVPPMVVIVLLATVFHQFAQLAWLHEFLEGVAAAAIGMTASVGFRTARSLLAVRRWPLALIAVVFVAV GVLRWPLVPVALVAGAAGLYLASRSRHGAR
Sequences:
>Translated_190_residues MQSVSVRKTNDVSLLQILLLFARVGLTSFGGGLSAWIYREVVTQRGWLDEDEFLGALTLGQILPGSNVINLSIYVGYRMK GAIGSTVAVSSLLVPPMVVIVLLATVFHQFAQLAWLHEFLEGVAAAAIGMTASVGFRTARSLLAVRRWPLALIAVVFVAV GVLRWPLVPVALVAGAAGLYLASRSRHGAR >Mature_190_residues MQSVSVRKTNDVSLLQILLLFARVGLTSFGGGLSAWIYREVVTQRGWLDEDEFLGALTLGQILPGSNVINLSIYVGYRMK GAIGSTVAVSSLLVPPMVVIVLLATVFHQFAQLAWLHEFLEGVAAAAIGMTASVGFRTARSLLAVRRWPLALIAVVFVAV GVLRWPLVPVALVAGAAGLYLASRSRHGAR
Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20325; Mature: 20325
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVSVRKTNDVSLLQILLLFARVGLTSFGGGLSAWIYREVVTQRGWLDEDEFLGALTLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QILPGSNVINLSIYVGYRMKGAIGSTVAVSSLLVPPMVVIVLLATVFHQFAQLAWLHEFL HHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGVAAAAIGMTASVGFRTARSLLAVRRWPLALIAVVFVAVGVLRWPLVPVALVAGAAGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASRSRHGAR HHHCCCCCCC >Mature Secondary Structure MQSVSVRKTNDVSLLQILLLFARVGLTSFGGGLSAWIYREVVTQRGWLDEDEFLGALTLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QILPGSNVINLSIYVGYRMKGAIGSTVAVSSLLVPPMVVIVLLATVFHQFAQLAWLHEFL HHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGVAAAAIGMTASVGFRTARSLLAVRRWPLALIAVVFVAVGVLRWPLVPVALVAGAAGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASRSRHGAR HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7536734 [H]