| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783752
Identifier: 91783752
GI number: 91783752
Start: 2652281
End: 2653702
Strand: Reverse
Name: 91783752
Synonym: Bxe_A2062
Alternate gene names: NA
Gene position: 2653702-2652281 (Counterclockwise)
Preceding gene: 91783753
Following gene: 91783751
Centisome position: 54.2
GC content: 59.85
Gene sequence:
>1422_bases ATGAAAACCCTGTTCTTGCAGGCGCCGTCGTACGACGGCTTCGATGGTGGCGCGGGTTCGCGCTATCAGGCCAAACGTGA AGTCCGTTCGTTCTGGTATCCCACGTGGCTCGCGCAGCCCGCCGCACTCGTGCCCGACAGCCGCGTGCTCGATGCACCGG CAGATGGTCTGTCGGTCGAACAAACGCTGGACATTGCCGAGCAATACGATCTGGTGGTGATCCACACCAGCACGCCGTCC TTTCCCACCGACGCCCTGTTCGCCGAAGACCTGAAGAAGCGCAAACCGTCCGTACTGATCGGCATGGTGGGCGCCAAGGT CGCCGTCGATCCGCACAATTCGCTGACGGCTACCGAAGCGATCGACTTCGTCTGTCGCGAGGAATTCGATTTCACCTGTC AGGAAGTCGCCGAAGGCAAGCCGTTCGCGCAGATCAAAGGTCTGAGCTATCGCGCCGCCGACGGTTCGATCGAGCACAAC GAAGCACGCCCGATCCTCGAGAACATGGACGAGTTGCCGTTCGTCGCGCCCGTCTACAAGCGCGATCTGAAGATCGACAA CTACTTCATCGGCTATCTGAAGCACCCGTACGTGTCGATCTACACGGGCCGTGGTTGCCGCTCGAAGTGCACGTTCTGCC TGTGGCCGCAAACGGTGGGCGGGCATCGCTACCGCACGCGCTCGGTGGAGAACGTGCTGGCGGAAGTGAAGTGGATTCGC GACAACATGCCTGAAGTCAGGGAGATCATGTTCGACGACGACACCTTCACCGACTTCAAGCCGCGTGTCGAAGAAATTGC CCGCGGTCTTGGGCAACTGGGCGTGACGTGGTCGTGCAACGCGAAAGCGAACGTGCCGTACCCGACGCTGAAGATCATGA AGGAAAACGGCCTGCGCCTGCTGCTGGTCGGCTATGAATCGGGCGACGACCAGATCCTGCTGAACATCAAGAAGGGTTTG CGCACGGACATCGCACGCCGTTTCAGCGACGATTGCCGCAAACTCGGCATCAAGATTCACGGCACCTTCATTCTCGGTCT GCCGGGCGAAACGCAGGACACGATCCAGAAGACGATCGAATACGCGAAAGAGATCAACCCGCACACGATCCAGGTATCGC TCGCGGCGCCGTATCCCGGCACGACGCTCTACAACCAGGCGGTCGACAACGGCTGGCTCGAAGAGAACAAGGTGATCAAC CTCGTCAGCAAATCGGGCGTGCAGCTCGCGGCGATCGGCTATCCGCATCTGTCGCGCGACGAGATTTACCATCAGCTCGA AAACTTCTACAAGCGTTTCTATTTCCGGCCGTCGAAGATCTGGGAAATCCTGCGGGAGATGCTGACGAGCTGGGACATGA TGAAACGGCGCCTGCGCGAGGGTGTCGAATTCTTCCGTTTCCTGCGCGCCCACGAGGCGTGA
Upstream 100 bases:
>100_bases CGTAGTATTTGCGCGATTGCCCGCCGCCCGGCGGGAAATAGTTCCGACAGTTTGTCGCTAGAGAACTGAAAGCGCCGATA CAAGCCTTGCTGGAGCATCC
Downstream 100 bases:
>100_bases GCGCCGCGCATCTGGTCGCCGTCACGCTGGCCTGCGCCTGCGCGGCGGGCGCGGTCTTCGGCATTGGCTACACCGTGCTT GCCGGTGCGCTGATCGGACG
Product: putative methyltransferase, or Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVEQTLDIAEQYDLVVIHTSTPS FPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEAIDFVCREEFDFTCQEVAEGKPFAQIKGLSYRAADGSIEHN EARPILENMDELPFVAPVYKRDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYPTLKIMKENGLRLLLVGYESGDDQILLNIKKGL RTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVIN LVSKSGVQLAAIGYPHLSRDEIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA
Sequences:
>Translated_473_residues MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVEQTLDIAEQYDLVVIHTSTPS FPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEAIDFVCREEFDFTCQEVAEGKPFAQIKGLSYRAADGSIEHN EARPILENMDELPFVAPVYKRDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYPTLKIMKENGLRLLLVGYESGDDQILLNIKKGL RTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVIN LVSKSGVQLAAIGYPHLSRDEIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA >Mature_473_residues MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVEQTLDIAEQYDLVVIHTSTPS FPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEAIDFVCREEFDFTCQEVAEGKPFAQIKGLSYRAADGSIEHN EARPILENMDELPFVAPVYKRDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYPTLKIMKENGLRLLLVGYESGDDQILLNIKKGL RTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVIN LVSKSGVQLAAIGYPHLSRDEIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 53973; Mature: 53973
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVE CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEECCCCCCCCHH QTLDIAEQYDLVVIHTSTPSFPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEA HHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHH IDFVCREEFDFTCQEVAEGKPFAQIKGLSYRAADGSIEHNEARPILENMDELPFVAPVYK HHHHHHHCCCCCHHHHHCCCCCHHCCCCEEECCCCCCCCCCCCCHHHCHHHCCCCCHHHH RDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR HCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYPTLKIMKENGLRL CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEEECCCCEE LLVGYESGDDQILLNIKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIE EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHH YAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVINLVSKSGVQLAAIGYPHLSRD HHHHCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCHH EIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVPDSRVLDAPADGLSVE CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEECCCCCCCCHH QTLDIAEQYDLVVIHTSTPSFPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTATEA HHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHH IDFVCREEFDFTCQEVAEGKPFAQIKGLSYRAADGSIEHNEARPILENMDELPFVAPVYK HHHHHHHCCCCCHHHHHCCCCCHHCCCCEEECCCCCCCCCCCCCHHHCHHHCCCCCHHHH RDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLAEVKWIR HCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH DNMPEVREIMFDDDTFTDFKPRVEEIARGLGQLGVTWSCNAKANVPYPTLKIMKENGLRL CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEEECCCCEE LLVGYESGDDQILLNIKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIE EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHH YAKEINPHTIQVSLAAPYPGTTLYNQAVDNGWLEENKVINLVSKSGVQLAAIGYPHLSRD HHHHCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCHH EIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]