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The map label for this gene is qseB [H]

Identifier: 91783748

GI number: 91783748

Start: 2647827

End: 2648498

Strand: Direct

Name: qseB [H]

Synonym: Bxe_A2066

Alternate gene names: 91783748

Gene position: 2647827-2648498 (Clockwise)

Preceding gene: 91783744

Following gene: 91783749

Centisome position: 54.08

GC content: 64.29

Gene sequence:

>672_bases
ATGAACGGACTCATGCGCGTACTCCTCGTAGAAGACGACGATCTGATCGGCTGCGGTGTCGAAGCGGGACTGCGTCAAGC
CGGCTTCACGGTCGACTGGACCCGCGACGGCCATAAGGCCGGGCTCGCGCTCGACACCACCGTCTACGCACTGGTGGTGC
TCGATCTCGGCTTGCCCCGCGTATCGGGCATGGAACTGCTCAAACGGGTGCGCGATTCGGGTAAGGACGTGCCGGTGCTG
GTGCTGACCGCGCGGGGCACGGTGGCCGACCGTGTCGGCGGCCTCGAAGCGGGCGCTGACGACTACCTCGGCAAGCCCTT
CGATCTGACCGAGCTGATCGCCCGTTGCCGGGCCTTGTTGCGCCGCGCGCAGGGCCGCAGCGTCGAGCAGATCCGCTATC
TGGACCTGACGGTCAACCCGGCCGCGCAAACCGTCGACGTAGGCACGAGGCGCGTGCCGCTCACCTCGCGAGAATGGGCG
ATCCTGCTGCAGTTGCTGACCAATCAGGGGATTCCGCAATCGCGCTCGCGTCTGGAAGAAAGCCTGTACGGCTGGCAGGA
GGAAATCGAGAGCAACGCGATCGAGGTGCATGTGTCCAATCTGCGCAAAAAGCTCGGCGCGAAGCTGATCAAGACGGTGC
GCAATATCGGCTACGTAGTGGAGAAAGCATGA

Upstream 100 bases:

>100_bases
GGCGTATAAAGCGGGTTATGAACAGCATGGTTAAACTTCGGGTTGCGCTTGGGCGCCTGCCTGAATATGCCGGCCGCCAT
GCAATAAAACATCGAATGGA

Downstream 100 bases:

>100_bases
TGGGCGCGTCGATTCGCCGGCGCCTCGTGCTGCTGGTGCTCGCCAGCATCGTGCTGATGTGGGGCATCGCGCTCGTGTCC
AGCTATCGTCAGGCCACGCG

Product: two component transcriptional regulator QseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNGLMRVLLVEDDDLIGCGVEAGLRQAGFTVDWTRDGHKAGLALDTTVYALVVLDLGLPRVSGMELLKRVRDSGKDVPVL
VLTARGTVADRVGGLEAGADDYLGKPFDLTELIARCRALLRRAQGRSVEQIRYLDLTVNPAAQTVDVGTRRVPLTSREWA
ILLQLLTNQGIPQSRSRLEESLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKA

Sequences:

>Translated_223_residues
MNGLMRVLLVEDDDLIGCGVEAGLRQAGFTVDWTRDGHKAGLALDTTVYALVVLDLGLPRVSGMELLKRVRDSGKDVPVL
VLTARGTVADRVGGLEAGADDYLGKPFDLTELIARCRALLRRAQGRSVEQIRYLDLTVNPAAQTVDVGTRRVPLTSREWA
ILLQLLTNQGIPQSRSRLEESLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKA
>Mature_223_residues
MNGLMRVLLVEDDDLIGCGVEAGLRQAGFTVDWTRDGHKAGLALDTTVYALVVLDLGLPRVSGMELLKRVRDSGKDVPVL
VLTARGTVADRVGGLEAGADDYLGKPFDLTELIARCRALLRRAQGRSVEQIRYLDLTVNPAAQTVDVGTRRVPLTSREWA
ILLQLLTNQGIPQSRSRLEESLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=45.3703703703704, Blast_Score=193, Evalue=7e-51,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=41.6666666666667, Blast_Score=168, Evalue=2e-43,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=40.0900900900901, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=36.6515837104072, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=33.9449541284404, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=34.5454545454545, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=32.15859030837, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=35.4978354978355, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=35.1598173515982, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786911, Length=204, Percent_Identity=34.3137254901961, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=30.1801801801802, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=30.2222222222222, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=27.6315789473684, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1788550, Length=113, Percent_Identity=33.6283185840708, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=30.8270676691729, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=35.1851851851852, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24529; Mature: 24529

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLMRVLLVEDDDLIGCGVEAGLRQAGFTVDWTRDGHKAGLALDTTVYALVVLDLGLPR
CCCCEEEEEECCCCEEECCHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCC
VSGMELLKRVRDSGKDVPVLVLTARGTVADRVGGLEAGADDYLGKPFDLTELIARCRALL
CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RRAQGRSVEQIRYLDLTVNPAAQTVDVGTRRVPLTSREWAILLQLLTNQGIPQSRSRLEE
HHHCCCCHHHEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
SLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKA
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGLMRVLLVEDDDLIGCGVEAGLRQAGFTVDWTRDGHKAGLALDTTVYALVVLDLGLPR
CCCCEEEEEECCCCEEECCHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCC
VSGMELLKRVRDSGKDVPVLVLTARGTVADRVGGLEAGADDYLGKPFDLTELIARCRALL
CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RRAQGRSVEQIRYLDLTVNPAAQTVDVGTRRVPLTSREWAILLQLLTNQGIPQSRSRLEE
HHHCCCCHHHEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
SLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKA
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]