| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783733
Identifier: 91783733
GI number: 91783733
Start: 2629888
End: 2631240
Strand: Direct
Name: 91783733
Synonym: Bxe_A2081
Alternate gene names: NA
Gene position: 2629888-2631240 (Clockwise)
Preceding gene: 91783729
Following gene: 91783735
Centisome position: 53.72
GC content: 65.34
Gene sequence:
>1353_bases ATGAAAGCGCAGCGCCCGCGTCCCCCGCACTTCAACGGCGAACAGCCGCATGCCGAGTGGCGCGATCACACGTTGCCTTA TATCGCCGTGGCCGTGGTGATCGTGCTCGTGGTCACGCTGGCCGTCTGGCTGATCGATCCGGCGCCGCCCAGAACGATCA CCATGAGCGCCGGTCCGCACGAAAGCTCGTTTCTCGTCGCCGCGGAGCAGTACCGGAAAATCCTTGCCCGCAACGGCATT ACGCTGAACGTGCTGGAGTCCGACGGCTCCGTGCAGAACCTGCACCGTCTGCTGGACCCGAAGCAGCATGTCGACATTGC CTTCGTGCAGGGCGGCGTGGCCGACGGCCTCAACACTGCGTCGCTGATGTCGCTCGGCAGCGTCTTCTATATTCCGGTGG TGGTGTTCTATCGCGGCGCGGGCCTGAACCAGCTTTCGCAACTGGAAGGCAAACGGATCGCGGTGGGCCGCGAAGGCAGC GGCACGCGGCTGCTGGCGCTCAAACTGCTGGATGCCAACGGGATCGAGCCGGGCGGCAACACGGCACTGGTGCCGAGCGA CGGCTTGCAGGCCGCCACCCAGCTCGTGGCGGGCGAAGTGGACGCGGCGATCCTGAGCGGCGACTCCGCGACCCGTGGCC TGATGCTGCGCCTGCTCAAGGTGCCGGGCGTGTCGGTCATGAACTTCGCCGAAGCGAGCGCCTATACGCGCCTCTTTCCC TATCTGGACGAAATCGACCTGCCGGTCGGCGTGCTGGATCTGAAGCGCACCATTCCGCCCGAAACGGTGCATCTGATCAG CCCGACGGTCGAACTGGTGGCCCGCAACACGCTGCATCCGGCCATTTCCGACCTGCTGATCGAAGCGGCGCAGGAAGTGC ACGGCATGCCGGGGTTATTGCAGCGCGCGGGGCAATTTCCGAGTCCGGTCGCGCGTGAATATCAGATCAGCGAGGACGCG CAGCGCTACTACAGGACGGGCAAGAGCTTTCTCTACCGCACGCTGCCGTTCTGGCTGGCGAGCATCGGCGACCGCACGCT GGTTCTGCTGCTGCCGGTGGCCGTGCTGCTGTTTCCGGCCATGCGCCTGATTCCGGCGCTGTACCGCTGGCGGGTGCGCT CACGCATCTATCGCTATTATGGTTCGCTGATTGCGATCGAACGCGGCGCGCTCGCCGATTCGACCGACGAGGAGCGCAAG CGGCTCTTCGCGGAACTGGATCAGATCGAGGATTCGTTGAACCGGCTGCGCATGCCGCTCGCTTACGCCGACGCGTTCTA TGTACTGCGCGAACACGTCGGCTTCGTGCGCAGCCGGCTAGCGGCTGCGTCGCGGCAAGGCAGCCACCCCTAG
Upstream 100 bases:
>100_bases TTTGCCCGCGCCCGGTCGGTCAATAGAGCAAACTGCCGACGGCAAACGCGCCACGGACAGTGGACAATGCGATCATCCCG GCTCCCGGCACGGAGTATCC
Downstream 100 bases:
>100_bases GCGGGGTGGCGGGTTGTTATGCTTCGCGGGTGGCCGGCGCGCTGAGCGGTTCAGCGGTGGCCTCGTGAGCCGTTCCCTGC GCGGAATCGGGGGCATTTTC
Product: putative TRAP-type uncharacterized transport system, periplasmic component protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKAQRPRPPHFNGEQPHAEWRDHTLPYIAVAVVIVLVVTLAVWLIDPAPPRTITMSAGPHESSFLVAAEQYRKILARNGI TLNVLESDGSVQNLHRLLDPKQHVDIAFVQGGVADGLNTASLMSLGSVFYIPVVVFYRGAGLNQLSQLEGKRIAVGREGS GTRLLALKLLDANGIEPGGNTALVPSDGLQAATQLVAGEVDAAILSGDSATRGLMLRLLKVPGVSVMNFAEASAYTRLFP YLDEIDLPVGVLDLKRTIPPETVHLISPTVELVARNTLHPAISDLLIEAAQEVHGMPGLLQRAGQFPSPVAREYQISEDA QRYYRTGKSFLYRTLPFWLASIGDRTLVLLLPVAVLLFPAMRLIPALYRWRVRSRIYRYYGSLIAIERGALADSTDEERK RLFAELDQIEDSLNRLRMPLAYADAFYVLREHVGFVRSRLAAASRQGSHP
Sequences:
>Translated_450_residues MKAQRPRPPHFNGEQPHAEWRDHTLPYIAVAVVIVLVVTLAVWLIDPAPPRTITMSAGPHESSFLVAAEQYRKILARNGI TLNVLESDGSVQNLHRLLDPKQHVDIAFVQGGVADGLNTASLMSLGSVFYIPVVVFYRGAGLNQLSQLEGKRIAVGREGS GTRLLALKLLDANGIEPGGNTALVPSDGLQAATQLVAGEVDAAILSGDSATRGLMLRLLKVPGVSVMNFAEASAYTRLFP YLDEIDLPVGVLDLKRTIPPETVHLISPTVELVARNTLHPAISDLLIEAAQEVHGMPGLLQRAGQFPSPVAREYQISEDA QRYYRTGKSFLYRTLPFWLASIGDRTLVLLLPVAVLLFPAMRLIPALYRWRVRSRIYRYYGSLIAIERGALADSTDEERK RLFAELDQIEDSLNRLRMPLAYADAFYVLREHVGFVRSRLAAASRQGSHP >Mature_450_residues MKAQRPRPPHFNGEQPHAEWRDHTLPYIAVAVVIVLVVTLAVWLIDPAPPRTITMSAGPHESSFLVAAEQYRKILARNGI TLNVLESDGSVQNLHRLLDPKQHVDIAFVQGGVADGLNTASLMSLGSVFYIPVVVFYRGAGLNQLSQLEGKRIAVGREGS GTRLLALKLLDANGIEPGGNTALVPSDGLQAATQLVAGEVDAAILSGDSATRGLMLRLLKVPGVSVMNFAEASAYTRLFP YLDEIDLPVGVLDLKRTIPPETVHLISPTVELVARNTLHPAISDLLIEAAQEVHGMPGLLQRAGQFPSPVAREYQISEDA QRYYRTGKSFLYRTLPFWLASIGDRTLVLLLPVAVLLFPAMRLIPALYRWRVRSRIYRYYGSLIAIERGALADSTDEERK RLFAELDQIEDSLNRLRMPLAYADAFYVLREHVGFVRSRLAAASRQGSHP
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49544; Mature: 49544
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQRPRPPHFNGEQPHAEWRDHTLPYIAVAVVIVLVVTLAVWLIDPAPPRTITMSAGPH CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC ESSFLVAAEQYRKILARNGITLNVLESDGSVQNLHRLLDPKQHVDIAFVQGGVADGLNTA CCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHCCEEEEEECCCCCCCCHH SLMSLGSVFYIPVVVFYRGAGLNQLSQLEGKRIAVGREGSGTRLLALKLLDANGIEPGGN HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCC TALVPSDGLQAATQLVAGEVDAAILSGDSATRGLMLRLLKVPGVSVMNFAEASAYTRLFP EEECCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YLDEIDLPVGVLDLKRTIPPETVHLISPTVELVARNTLHPAISDLLIEAAQEVHGMPGLL HHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH QRAGQFPSPVAREYQISEDAQRYYRTGKSFLYRTLPFWLASIGDRTLVLLLPVAVLLFPA HHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MRLIPALYRWRVRSRIYRYYGSLIAIERGALADSTDEERKRLFAELDQIEDSLNRLRMPL HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH AYADAFYVLREHVGFVRSRLAAASRQGSHP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKAQRPRPPHFNGEQPHAEWRDHTLPYIAVAVVIVLVVTLAVWLIDPAPPRTITMSAGPH CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC ESSFLVAAEQYRKILARNGITLNVLESDGSVQNLHRLLDPKQHVDIAFVQGGVADGLNTA CCCEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHCCEEEEEECCCCCCCCHH SLMSLGSVFYIPVVVFYRGAGLNQLSQLEGKRIAVGREGSGTRLLALKLLDANGIEPGGN HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCC TALVPSDGLQAATQLVAGEVDAAILSGDSATRGLMLRLLKVPGVSVMNFAEASAYTRLFP EEECCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YLDEIDLPVGVLDLKRTIPPETVHLISPTVELVARNTLHPAISDLLIEAAQEVHGMPGLL HHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH QRAGQFPSPVAREYQISEDAQRYYRTGKSFLYRTLPFWLASIGDRTLVLLLPVAVLLFPA HHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MRLIPALYRWRVRSRIYRYYGSLIAIERGALADSTDEERKRLFAELDQIEDSLNRLRMPL HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH AYADAFYVLREHVGFVRSRLAAASRQGSHP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA