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The map label for this gene is nahR [H]

Identifier: 91783708

GI number: 91783708

Start: 2602446

End: 2603399

Strand: Reverse

Name: nahR [H]

Synonym: Bxe_A2106

Alternate gene names: 91783708

Gene position: 2603399-2602446 (Counterclockwise)

Preceding gene: 91783716

Following gene: 91783706

Centisome position: 53.18

GC content: 62.89

Gene sequence:

>954_bases
ATGAAATATAAAATCAACCGCATGGATATCTGGATGAATTCGCTGGATCAGGTCGACCTCAACCTGCTGCGCGTTTTTCA
GGCGATCGTCGAAGAACGCAGCCTGACTCGCGCGGGCGAGCGGCTGGCGTTGTCGCAGCCCGCCATCAGCTATTCGCTGG
GGCGTTTGCGCACGCTATTCGACGACCCGCTCTTTATCCGCACGCGCGCCGGCATGCAGCCCACGCCGATAGCGCTGGAG
CTGTCGGCTATCGTGGCGCGCGCGCTGGACACGGTGCGCGAGGCGCTGCGCTACGCGGAACATTTCGACCCGGCGGTGAG
CACGCGCACGTTTCGCGTGTCGCTTTCGGATGCGGGCGAACTCGCCTATCTGCCGCCCATTTGCGAGGCTTTGCACCAGC
AGGCGCCGCGCGTGAGATTGCGCATCGAGCCGTTGCCGGTCGAGGAGATCGAAGACGCATTGCGCGCGAGCCGGCTCGAT
TTCGCCATCGGCAATCTGCCTACACTGACCGCACGCACGCGCCATCAGGCACTGTTCGAAGAGACGTACGTATGCATGAC
GAGGAAGCGCCGCGGCTTGCCGCGCGCGAAGGAGCTGAGTCTGAAGGCGTTTCTGGATGCTTCGCACGTGCAGATCACGT
CGGTCGAGCACAGTCACCGCGCGCTCGACGACGAATTCCGCACGCAGGGCGTGGGGCGTCATATCGCGCTGGAACTACCG
CATTTCGTGGCGTTGCCGAGCGTGCTGGCGGTCACCGATCTGTTCGCCACGCTGCCGCGGCGCCTTGCGCAGATTTTCAA
TCGCGGCGGCAATTTTCAGATCTACGAGTTGCCCGTGACCTTGCCGATCGCGGCCGTGACGATGCACTGGCACGAGCATT
TCGATCAGGACGAGGGCAACGTGTGGCTGCGCAACCTGATGGCGGATATCGTGCGGCACTTCGATGGGAAGTGA

Upstream 100 bases:

>100_bases
TCGACGCTCTGATACGGGGATTCGCTCATGGCTATGCAGGTGGGGTGGTGGATGAAGGCCAGTCTCGCCGACCCGTTGAT
ATGCGTCAAATTGATCTAAA

Downstream 100 bases:

>100_bases
CCGCGCGGCCCGGTTAAATCTCGTCAAACCCGTTTGAACAGCTCACGTGCGAGCGAACAGAGCAACGTGGTGGTCGGCGA
TTCGTCCTGCAAACGGCGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKYKINRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQPTPIALE
LSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALHQQAPRVRLRIEPLPVEEIEDALRASRLD
FAIGNLPTLTARTRHQALFEETYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELP
HFVALPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNLMADIVRHFDGK

Sequences:

>Translated_317_residues
MKYKINRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQPTPIALE
LSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALHQQAPRVRLRIEPLPVEEIEDALRASRLD
FAIGNLPTLTARTRHQALFEETYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELP
HFVALPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNLMADIVRHFDGK
>Mature_317_residues
MKYKINRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQPTPIALE
LSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALHQQAPRVRLRIEPLPVEEIEDALRASRLD
FAIGNLPTLTARTRHQALFEETYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELP
HFVALPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGNVWLRNLMADIVRHFDGK

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=302, Percent_Identity=28.8079470198675, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87081766, Length=255, Percent_Identity=27.4509803921569, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790147, Length=307, Percent_Identity=25.0814332247557, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786820, Length=287, Percent_Identity=24.0418118466899, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081904, Length=180, Percent_Identity=30, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36157; Mature: 36157

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKINRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLF
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DDPLFIRTRAGMQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGE
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
LAYLPPICEALHQQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFE
EEECCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECC
HFVALPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCH
VWLRNLMADIVRHFDGK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKINRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLF
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DDPLFIRTRAGMQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGE
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
LAYLPPICEALHQQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFE
EEECCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECC
HFVALPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELPVTLPIAAVTMHWHEHFDQDEGN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCH
VWLRNLMADIVRHFDGK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]