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The map label for this gene is ymdC [H]

Identifier: 91783661

GI number: 91783661

Start: 2540064

End: 2541617

Strand: Direct

Name: ymdC [H]

Synonym: Bxe_A2154

Alternate gene names: 91783661

Gene position: 2540064-2541617 (Clockwise)

Preceding gene: 91783660

Following gene: 91783672

Centisome position: 51.88

GC content: 63.38

Gene sequence:

>1554_bases
ATGGCGACGTTTCGTGGCATTGCGGCAATCCTGCTGATCGCGTTGCTGTCCGCCTGCGCGAGCCTGCCGCCACAGGCCGG
GCGCAGCGCGACACACGCGCTGACGGACACCGACAGCACCCGGCTCGGCGCCGCGTTCGTGCCGCAGGAGCGCAAGCATC
CCGACAGCAGCGCATTCCATCTGTTGCCCAACGGCGTCGATGCCCTTCTCGCCCGTATCGTGCTGGCGGATGCGGCCGAG
CGTACGCTCGATCTGCAGTACTACATCTGGCACGACGATCTGACCGGCCGCCACCTGGCCGACGCCGTGCTCAAGGCGGC
CGATCGCGGCGTCAGGGTGCGCGTGTTGCTGGACGACCTGGGCACCGGCGCCGACGACCAGGTTCTGCTCGCCATCAGTT
CACACTCCAACATCGAAATACGGCTGTTCAATCCGATTGCCAGCCGCAGCTTCAAGAAGCTCGGCAGCGCGCTGGAGTTC
AGCCGGATCAACCGCCGCATGCACAACAAGGCGCTGATCGCGGACAATCAGGCCGCCATCCTGGGCGGCCGCAATATCGG
CGATGAGTATTTCGGCGCATCCAGCGAGGTCGATTTCGGCGATCTCGACGTGCTGACTTTCGGGCCGGTGGTCCACAAGG
TCTCCAATGCCTTCGACGAATTCTGGAACTCGGAGGCCGCCTATCCGATTGCCAGTCTGACCGGCCACGCCGCCGGCCCG
GACGCGCTGCCGGGCTATCGCGCGAAGCTCACGGCATTCGTTGCGTCCGAACACGATTCGCCGTACGTCACGCAGGCACG
GGAAAGGCTTCGCGACACTCTGGATGCGCGCGAGACCGACTTCGCCTGGGGAAAAGCCACGCTCCTCTACGACGATCCCG
CCAAGATCACGCGCTCGCCGGACGATCCACAGGGACACTTGCTGTCGCAGTTCGACGCGCTGAGTATCCAGCCCGCCAAG
GAAGTGCTGATTATCTCGCCGTACTTCGTGCCCGGTAAAAAGGGCGTGGCGTGGATGCGTGCACAGACGCAGCGCGGCGT
GCGCGTGACGGTGCTGACGAACTCGCTCGCCGCTACGGACGTTGCGGCGGTCCACGCGGGGTATCAGCGCTATCGCAAGG
ATCTGCTCGACGCGGGCGTGCATCTCTACGAACTGAAGCCGGCTCCCGGCGAAGACAACGGCGAGAAAAAGAAATCGATT
CTGGGTTCCTCGAAAGCCTCGCTGCATGCAAAGACCTATGTATTCGACAGGACGAGTGTCTTCATCGGCTCGATGAATCT
CGATCCCCGTTCGATCACGCTCAATACGGAGATCGGCGTGTACTGCGAAAGCGCCCCGCTCGCCGCTCAGGTGGCGGATG
GACTCGAACCGAGACTGGATCAGATCGCGTGGCGGCTGGAAACCCGCACGGATGGCAATGGCACGAGTCGCATTGTGTGG
ATCGACACCGCGCCGGACGGCAAAGTGACCGAGAGCGACGAACCCGGCGTGTCTGGCATCAAGCGTGTAGGTATCTGGTT
TCTCGGCCTGTTGCCGATCGAATCGGAGTTGTGA

Upstream 100 bases:

>100_bases
TCCGGCATGAGCGCGCCAGGCTGACCAGACCATCCGTGTTCACTCGACTCGCCCCCCCGTCTGCGGCTATCTTACGGACT
GGGCGATCGAAGGGCACAAC

Downstream 100 bases:

>100_bases
TGCGCAGCCGCTGGCCCGTTCAGCGGATCAGCGTTTGATCTTCAGATACGCCCGGCTGATCGTGGGCCGCGTGTGCACCC
ATAAGCGCGAGGCCAGCCAG

Product: putative phospholipase D precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MATFRGIAAILLIALLSACASLPPQAGRSATHALTDTDSTRLGAAFVPQERKHPDSSAFHLLPNGVDALLARIVLADAAE
RTLDLQYYIWHDDLTGRHLADAVLKAADRGVRVRVLLDDLGTGADDQVLLAISSHSNIEIRLFNPIASRSFKKLGSALEF
SRINRRMHNKALIADNQAAILGGRNIGDEYFGASSEVDFGDLDVLTFGPVVHKVSNAFDEFWNSEAAYPIASLTGHAAGP
DALPGYRAKLTAFVASEHDSPYVTQARERLRDTLDARETDFAWGKATLLYDDPAKITRSPDDPQGHLLSQFDALSIQPAK
EVLIISPYFVPGKKGVAWMRAQTQRGVRVTVLTNSLAATDVAAVHAGYQRYRKDLLDAGVHLYELKPAPGEDNGEKKKSI
LGSSKASLHAKTYVFDRTSVFIGSMNLDPRSITLNTEIGVYCESAPLAAQVADGLEPRLDQIAWRLETRTDGNGTSRIVW
IDTAPDGKVTESDEPGVSGIKRVGIWFLGLLPIESEL

Sequences:

>Translated_517_residues
MATFRGIAAILLIALLSACASLPPQAGRSATHALTDTDSTRLGAAFVPQERKHPDSSAFHLLPNGVDALLARIVLADAAE
RTLDLQYYIWHDDLTGRHLADAVLKAADRGVRVRVLLDDLGTGADDQVLLAISSHSNIEIRLFNPIASRSFKKLGSALEF
SRINRRMHNKALIADNQAAILGGRNIGDEYFGASSEVDFGDLDVLTFGPVVHKVSNAFDEFWNSEAAYPIASLTGHAAGP
DALPGYRAKLTAFVASEHDSPYVTQARERLRDTLDARETDFAWGKATLLYDDPAKITRSPDDPQGHLLSQFDALSIQPAK
EVLIISPYFVPGKKGVAWMRAQTQRGVRVTVLTNSLAATDVAAVHAGYQRYRKDLLDAGVHLYELKPAPGEDNGEKKKSI
LGSSKASLHAKTYVFDRTSVFIGSMNLDPRSITLNTEIGVYCESAPLAAQVADGLEPRLDQIAWRLETRTDGNGTSRIVW
IDTAPDGKVTESDEPGVSGIKRVGIWFLGLLPIESEL
>Mature_516_residues
ATFRGIAAILLIALLSACASLPPQAGRSATHALTDTDSTRLGAAFVPQERKHPDSSAFHLLPNGVDALLARIVLADAAER
TLDLQYYIWHDDLTGRHLADAVLKAADRGVRVRVLLDDLGTGADDQVLLAISSHSNIEIRLFNPIASRSFKKLGSALEFS
RINRRMHNKALIADNQAAILGGRNIGDEYFGASSEVDFGDLDVLTFGPVVHKVSNAFDEFWNSEAAYPIASLTGHAAGPD
ALPGYRAKLTAFVASEHDSPYVTQARERLRDTLDARETDFAWGKATLLYDDPAKITRSPDDPQGHLLSQFDALSIQPAKE
VLIISPYFVPGKKGVAWMRAQTQRGVRVTVLTNSLAATDVAAVHAGYQRYRKDLLDAGVHLYELKPAPGEDNGEKKKSIL
GSSKASLHAKTYVFDRTSVFIGSMNLDPRSITLNTEIGVYCESAPLAAQVADGLEPRLDQIAWRLETRTDGNGTSRIVWI
DTAPDGKVTESDEPGVSGIKRVGIWFLGLLPIESEL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=482, Percent_Identity=42.5311203319502, Blast_Score=335, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56143; Mature: 56012

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFRGIAAILLIALLSACASLPPQAGRSATHALTDTDSTRLGAAFVPQERKHPDSSAFH
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCHHHCCCCCCEEE
LLPNGVDALLARIVLADAAERTLDLQYYIWHDDLTGRHLADAVLKAADRGVRVRVLLDDL
ECCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
GTGADDQVLLAISSHSNIEIRLFNPIASRSFKKLGSALEFSRINRRMHNKALIADNQAAI
CCCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEE
LGGRNIGDEYFGASSEVDFGDLDVLTFGPVVHKVSNAFDEFWNSEAAYPIASLTGHAAGP
EECCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
DALPGYRAKLTAFVASEHDSPYVTQARERLRDTLDARETDFAWGKATLLYDDPAKITRSP
CCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCC
DDPQGHLLSQFDALSIQPAKEVLIISPYFVPGKKGVAWMRAQTQRGVRVTVLTNSLAATD
CCCCCHHHHHCCCCCCCCCCCEEEECCEECCCCCCCEEEEHHCCCCEEEEEEECCHHHHH
VAAVHAGYQRYRKDLLDAGVHLYELKPAPGEDNGEKKKSILGSSKASLHAKTYVFDRTSV
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCEE
FIGSMNLDPRSITLNTEIGVYCESAPLAAQVADGLEPRLDQIAWRLETRTDGNGTSRIVW
EEEECCCCCCEEEEECCEEEEECCCCCHHHHHCCCCHHHHHHHEEEEECCCCCCCEEEEE
IDTAPDGKVTESDEPGVSGIKRVGIWFLGLLPIESEL
EEECCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC
>Mature Secondary Structure 
ATFRGIAAILLIALLSACASLPPQAGRSATHALTDTDSTRLGAAFVPQERKHPDSSAFH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCHHHCCCCCCEEE
LLPNGVDALLARIVLADAAERTLDLQYYIWHDDLTGRHLADAVLKAADRGVRVRVLLDDL
ECCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
GTGADDQVLLAISSHSNIEIRLFNPIASRSFKKLGSALEFSRINRRMHNKALIADNQAAI
CCCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEE
LGGRNIGDEYFGASSEVDFGDLDVLTFGPVVHKVSNAFDEFWNSEAAYPIASLTGHAAGP
EECCCCCHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
DALPGYRAKLTAFVASEHDSPYVTQARERLRDTLDARETDFAWGKATLLYDDPAKITRSP
CCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCC
DDPQGHLLSQFDALSIQPAKEVLIISPYFVPGKKGVAWMRAQTQRGVRVTVLTNSLAATD
CCCCCHHHHHCCCCCCCCCCCEEEECCEECCCCCCCEEEEHHCCCCEEEEEEECCHHHHH
VAAVHAGYQRYRKDLLDAGVHLYELKPAPGEDNGEKKKSILGSSKASLHAKTYVFDRTSV
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCEE
FIGSMNLDPRSITLNTEIGVYCESAPLAAQVADGLEPRLDQIAWRLETRTDGNGTSRIVW
EEEECCCCCCEEEEECCEEEEECCCCCHHHHHCCCCHHHHHHHEEEEECCCCCCCEEEEE
IDTAPDGKVTESDEPGVSGIKRVGIWFLGLLPIESEL
EEECCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]