| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is lpsE [H]
Identifier: 91783587
GI number: 91783587
Start: 2453135
End: 2455597
Strand: Direct
Name: lpsE [H]
Synonym: Bxe_A2228
Alternate gene names: 91783587
Gene position: 2453135-2455597 (Clockwise)
Preceding gene: 91783586
Following gene: 91783589
Centisome position: 50.11
GC content: 64.68
Gene sequence:
>2463_bases ATGAACCACGAAGTCCTTGAAGAAGCCGTGCTGCAACCCGCGACGCGCAGCGCACTGGCCGAACTCACCACCGTTCCCGG CGTTCAGGCGCCACGCCGCGCGGTCTTCCGCAGCGACAAAACGGTGCGCGTCGCAATCGTGCATGACTGGCTCGTCACCT ATGCGGGGGCGGAGAAGGTGCTCGAACAGATCGTTGCGTGCTTTCCCGACGCGGACCTGTTCAGCCTCGTCGATTTTCTC GACGACCACAGCTTTCTGCGCGGCAAACCGGTTACGACGTCGTTCATCCAGAAGCTGCCGCTCGCGCGCACCAGGTACCG CTCGTATCTGCCGTTGATGCCGCTTGCGATCGAACAGCTCGACGTGTCGGCCTACGACGTGGTGATCTCGAGTAGCCACG CGGTCGCCAAGGGCATTCTGACCGGCCCCGACCAGGTGCATATCAGCTACGTGCATTCGCCGATCCGCTATGCGTGGGAT CTGCAGCACCAGTATCTGCGGCAGTCGAAACTGACGGCCGGCCTGAAGTCGGGTATGGCGCGGCTGATTCTGCATTACAT CCGCAACTGGGATATCCGTACGTCGAATTCGGTGGATGGCTTCGTCGCCAACTCCGAATTCATTGCGCGGCGTATCAAGA AGGTCTATCAGCGCGACGCACACGTGATCTTTCCGCCGGTCGACGTCGAAGCCTTCGCGCTCTGCATCGAGAAGGACGAC TTCTATCTGACCGCCTCGCGAATGGTGCCGTACAAGAAAATCGATCTGATCGTCGAAGCGTTCGCGCGCATGCCGGAGCG CAAGCTCGTGGTGATCGGCGACGGTCCCGACATGCAGAAGATCCGCGCGAAGGCGGGGCCGAACGTCGAGATCATGGGCT ACCAGCCGTTCAAGGTGCTCAAGGACCGGATGAGCCGCGCCAAGGCCTTCGTGTTCGCCGCGGAAGAGGACTTCGGTATT TCCGTGGTCGAGGCGCAGGCCTGCGGCACGCCGGTGATCGCCTACGGCAAGGGCGGCGCGCTCGAAACCGTGCGCGATCT GTCCGAGCCCCGGCCTACCGGCATGTTCTTCGATGAACAGGATGCCGAATCGATCATCGCCGCGGTCGAGCGTTTCGACG ACCACGTGAAGCGTTTTTCGCCGCAGGATTGCCGCGCGAACGCCGAGCAGTTTTCGGCCGCGCATTTCCGCGAGCGTTTC TTCGCGCATGTGCGGGCCGCGGTGCCGGCGTTGCGCACGGCGACGCTGCCGCCGTACGCGCCCTACGTTCCATACGAAGG CGGGACCGTGGCCAGCGGACCGCGCATTCTGGCCGTCGATCAAAGCGGGGTGCTCGGCGGCGCCGAACTGTCGCTGCTGG AAATCGTCAAGGCATTGCGCTCGCGCATCGAAGTCGTGCTGTTCGACGACGGCCCGTTCCGCACCGCGCTCGCCAAAGCC GGCGTGGCCGTCGACGTGCTCGACGCGGGCGCGCTGCGCCATGTTCGCAAGCAGGGCGGCTCGTTGCCGAAGGGCCAGGC GCTCAAAGGCCTGCTGTCGCTCGTGCGCGCCACGGCCAAACGCGCGCGCAAGGCCGATGTGATCTACGCGAACACCCAGC GCGCGATGGTGATCGGCGCGCTCGCCGGCAAGCTGGCGCGGCGCCCGGTGGTCTGGCATCTGCGCGATATCGTGAGCCCC GAGCATTTCGGCGGCAAGCAACTGGCGATCATCAAATGGTGCGCGCGTCTTGGCCTCACGCATGTGATCGCCAATTCGGC CGCATCGGCGCGCGCCTTTGCCGAGCTGACGCAGTTCGACGAAAAACGCATCGACGTGGTGTTCAACGGTATTTCCGCCG CACCGTTCGACGCCTTGCGCACGGTCCCGCAAGCGACGCTGCGCAAGCGCCTCGGCTTGCCGGAGGATGCATTCCTGGTG GGCTCGTTCAGCCGTCTCGCACGTTGGAAAGGGCAGCACGTGCTGCTCGAAGCAATGGTCCTCAATCCGCAGATGCATGC GGTGCTGGTGGGTGCGCCGCTCTTTGGCGAGGAGCAGTACGAGATCGAATTGCATGCGTTCGTCGCCGCGCACAGCCTGG GCGGGCGGGTGCATTTTCTCGGCTTCCAGCACGATATCGCGGCCTGCATGTGCGCGGTCGACGCGGTCGTCCATACGTCG ATCACGCCGGAGCCGTTCGGCCGCGTGATCGTCGAAGGCATGCTGGCGCAGCGGCCAGTGGTGGCGGCACGCGCGGGCGG CGTGCTGGAGATCATCGACGACTACGAGAACGGCGTGCTGTGCACCCCGGCGGATGCGCATGGCCTTGCCGACACGCTCG CCGAATTGCGCTCGAACGACGAACTGCGCAACCGGCTGGTCAGGAACGGGTATCAGACGGCGCTGAGCCGGTTCGGCACG GCCACCTATGTCGAGGGTGTCGAGCGGATTCTGAAGCGTGTGACAGGCCCTGCAACGGCTTAG
Upstream 100 bases:
>100_bases TGATGGTGGGCGCGAACCTCGCCTGGTCGATCACCATGACACCCGCCCTGCGCGATCTTGCGCGATTACTGCTGTTACGA CTGAATCCGAGGAAAAGCGC
Downstream 100 bases:
>100_bases GGAGGATTTTTACGCGGGGTTGGCAGGGACTCGGCCAGTCCCTGCCGTTTGCGCAGCGGAGCGAAAGTCCGAGGACCTTC GCTCCGTTTTTTTGTCGCCC
Product: putative first mannosyl transferase, WbaZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MNHEVLEEAVLQPATRSALAELTTVPGVQAPRRAVFRSDKTVRVAIVHDWLVTYAGAEKVLEQIVACFPDADLFSLVDFL DDHSFLRGKPVTTSFIQKLPLARTRYRSYLPLMPLAIEQLDVSAYDVVISSSHAVAKGILTGPDQVHISYVHSPIRYAWD LQHQYLRQSKLTAGLKSGMARLILHYIRNWDIRTSNSVDGFVANSEFIARRIKKVYQRDAHVIFPPVDVEAFALCIEKDD FYLTASRMVPYKKIDLIVEAFARMPERKLVVIGDGPDMQKIRAKAGPNVEIMGYQPFKVLKDRMSRAKAFVFAAEEDFGI SVVEAQACGTPVIAYGKGGALETVRDLSEPRPTGMFFDEQDAESIIAAVERFDDHVKRFSPQDCRANAEQFSAAHFRERF FAHVRAAVPALRTATLPPYAPYVPYEGGTVASGPRILAVDQSGVLGGAELSLLEIVKALRSRIEVVLFDDGPFRTALAKA GVAVDVLDAGALRHVRKQGGSLPKGQALKGLLSLVRATAKRARKADVIYANTQRAMVIGALAGKLARRPVVWHLRDIVSP EHFGGKQLAIIKWCARLGLTHVIANSAASARAFAELTQFDEKRIDVVFNGISAAPFDALRTVPQATLRKRLGLPEDAFLV GSFSRLARWKGQHVLLEAMVLNPQMHAVLVGAPLFGEEQYEIELHAFVAAHSLGGRVHFLGFQHDIAACMCAVDAVVHTS ITPEPFGRVIVEGMLAQRPVVAARAGGVLEIIDDYENGVLCTPADAHGLADTLAELRSNDELRNRLVRNGYQTALSRFGT ATYVEGVERILKRVTGPATA
Sequences:
>Translated_820_residues MNHEVLEEAVLQPATRSALAELTTVPGVQAPRRAVFRSDKTVRVAIVHDWLVTYAGAEKVLEQIVACFPDADLFSLVDFL DDHSFLRGKPVTTSFIQKLPLARTRYRSYLPLMPLAIEQLDVSAYDVVISSSHAVAKGILTGPDQVHISYVHSPIRYAWD LQHQYLRQSKLTAGLKSGMARLILHYIRNWDIRTSNSVDGFVANSEFIARRIKKVYQRDAHVIFPPVDVEAFALCIEKDD FYLTASRMVPYKKIDLIVEAFARMPERKLVVIGDGPDMQKIRAKAGPNVEIMGYQPFKVLKDRMSRAKAFVFAAEEDFGI SVVEAQACGTPVIAYGKGGALETVRDLSEPRPTGMFFDEQDAESIIAAVERFDDHVKRFSPQDCRANAEQFSAAHFRERF FAHVRAAVPALRTATLPPYAPYVPYEGGTVASGPRILAVDQSGVLGGAELSLLEIVKALRSRIEVVLFDDGPFRTALAKA GVAVDVLDAGALRHVRKQGGSLPKGQALKGLLSLVRATAKRARKADVIYANTQRAMVIGALAGKLARRPVVWHLRDIVSP EHFGGKQLAIIKWCARLGLTHVIANSAASARAFAELTQFDEKRIDVVFNGISAAPFDALRTVPQATLRKRLGLPEDAFLV GSFSRLARWKGQHVLLEAMVLNPQMHAVLVGAPLFGEEQYEIELHAFVAAHSLGGRVHFLGFQHDIAACMCAVDAVVHTS ITPEPFGRVIVEGMLAQRPVVAARAGGVLEIIDDYENGVLCTPADAHGLADTLAELRSNDELRNRLVRNGYQTALSRFGT ATYVEGVERILKRVTGPATA >Mature_820_residues MNHEVLEEAVLQPATRSALAELTTVPGVQAPRRAVFRSDKTVRVAIVHDWLVTYAGAEKVLEQIVACFPDADLFSLVDFL DDHSFLRGKPVTTSFIQKLPLARTRYRSYLPLMPLAIEQLDVSAYDVVISSSHAVAKGILTGPDQVHISYVHSPIRYAWD LQHQYLRQSKLTAGLKSGMARLILHYIRNWDIRTSNSVDGFVANSEFIARRIKKVYQRDAHVIFPPVDVEAFALCIEKDD FYLTASRMVPYKKIDLIVEAFARMPERKLVVIGDGPDMQKIRAKAGPNVEIMGYQPFKVLKDRMSRAKAFVFAAEEDFGI SVVEAQACGTPVIAYGKGGALETVRDLSEPRPTGMFFDEQDAESIIAAVERFDDHVKRFSPQDCRANAEQFSAAHFRERF FAHVRAAVPALRTATLPPYAPYVPYEGGTVASGPRILAVDQSGVLGGAELSLLEIVKALRSRIEVVLFDDGPFRTALAKA GVAVDVLDAGALRHVRKQGGSLPKGQALKGLLSLVRATAKRARKADVIYANTQRAMVIGALAGKLARRPVVWHLRDIVSP EHFGGKQLAIIKWCARLGLTHVIANSAASARAFAELTQFDEKRIDVVFNGISAAPFDALRTVPQATLRKRLGLPEDAFLV GSFSRLARWKGQHVLLEAMVLNPQMHAVLVGAPLFGEEQYEIELHAFVAAHSLGGRVHFLGFQHDIAACMCAVDAVVHTS ITPEPFGRVIVEGMLAQRPVVAARAGGVLEIIDDYENGVLCTPADAHGLADTLAELRSNDELRNRLVRNGYQTALSRFGT ATYVEGVERILKRVTGPATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 90082; Mature: 90082
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHEVLEEAVLQPATRSALAELTTVPGVQAPRRAVFRSDKTVRVAIVHDWLVTYAGAEKV CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHCHHHH LEQIVACFPDADLFSLVDFLDDHSFLRGKPVTTSFIQKLPLARTRYRSYLPLMPLAIEQL HHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHHH DVSAYDVVISSSHAVAKGILTGPDQVHISYVHSPIRYAWDLQHQYLRQSKLTAGLKSGMA CCCCEEEEEECCHHHHHCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLILHYIRNWDIRTSNSVDGFVANSEFIARRIKKVYQRDAHVIFPPVDVEAFALCIEKDD HHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEEECCC FYLTASRMVPYKKIDLIVEAFARMPERKLVVIGDGPDMQKIRAKAGPNVEIMGYQPFKVL EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCHHHHH KDRMSRAKAFVFAAEEDFGISVVEAQACGTPVIAYGKGGALETVRDLSEPRPTGMFFDEQ HHHHHHHHEEEEEECCCCCEEEEEHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCH DAESIIAAVERFDDHVKRFSPQDCRANAEQFSAAHFRERFFAHVRAAVPALRTATLPPYA HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYVPYEGGTVASGPRILAVDQSGVLGGAELSLLEIVKALRSRIEVVLFDDGPFRTALAKA CCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHC GVAVDVLDAGALRHVRKQGGSLPKGQALKGLLSLVRATAKRARKADVIYANTQRAMVIGA CCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH LAGKLARRPVVWHLRDIVSPEHFGGKQLAIIKWCARLGLTHVIANSAASARAFAELTQFD HHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKRIDVVFNGISAAPFDALRTVPQATLRKRLGLPEDAFLVGSFSRLARWKGQHVLLEAMV HHCEEHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCEEEHHHH LNPQMHAVLVGAPLFGEEQYEIELHAFVAAHSLGGRVHFLGFQHDIAACMCAVDAVVHTS CCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCC ITPEPFGRVIVEGMLAQRPVVAARAGGVLEIIDDYENGVLCTPADAHGLADTLAELRSND CCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCH ELRNRLVRNGYQTALSRFGTATYVEGVERILKRVTGPATA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNHEVLEEAVLQPATRSALAELTTVPGVQAPRRAVFRSDKTVRVAIVHDWLVTYAGAEKV CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEHHHHHHHHCHHHH LEQIVACFPDADLFSLVDFLDDHSFLRGKPVTTSFIQKLPLARTRYRSYLPLMPLAIEQL HHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHHH DVSAYDVVISSSHAVAKGILTGPDQVHISYVHSPIRYAWDLQHQYLRQSKLTAGLKSGMA CCCCEEEEEECCHHHHHCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLILHYIRNWDIRTSNSVDGFVANSEFIARRIKKVYQRDAHVIFPPVDVEAFALCIEKDD HHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEEECCC FYLTASRMVPYKKIDLIVEAFARMPERKLVVIGDGPDMQKIRAKAGPNVEIMGYQPFKVL EEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCHHHHH KDRMSRAKAFVFAAEEDFGISVVEAQACGTPVIAYGKGGALETVRDLSEPRPTGMFFDEQ HHHHHHHHEEEEEECCCCCEEEEEHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCH DAESIIAAVERFDDHVKRFSPQDCRANAEQFSAAHFRERFFAHVRAAVPALRTATLPPYA HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYVPYEGGTVASGPRILAVDQSGVLGGAELSLLEIVKALRSRIEVVLFDDGPFRTALAKA CCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHC GVAVDVLDAGALRHVRKQGGSLPKGQALKGLLSLVRATAKRARKADVIYANTQRAMVIGA CCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH LAGKLARRPVVWHLRDIVSPEHFGGKQLAIIKWCARLGLTHVIANSAASARAFAELTQFD HHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKRIDVVFNGISAAPFDALRTVPQATLRKRLGLPEDAFLVGSFSRLARWKGQHVLLEAMV HHCEEHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCEEEHHHH LNPQMHAVLVGAPLFGEEQYEIELHAFVAAHSLGGRVHFLGFQHDIAACMCAVDAVVHTS CCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCC ITPEPFGRVIVEGMLAQRPVVAARAGGVLEIIDDYENGVLCTPADAHGLADTLAELRSND CCCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCH ELRNRLVRNGYQTALSRFGTATYVEGVERILKRVTGPATA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11157937; 11481430 [H]