| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783566
Identifier: 91783566
GI number: 91783566
Start: 2427873
End: 2429078
Strand: Direct
Name: 91783566
Synonym: Bxe_A2249
Alternate gene names: NA
Gene position: 2427873-2429078 (Clockwise)
Preceding gene: 91783561
Following gene: 91783569
Centisome position: 49.59
GC content: 66.92
Gene sequence:
>1206_bases ATGTTTTTCGATGAGCTAAGCAATGACGAATGGGCGCTGCTGGCAGCGCTTGTCTCAGATGAGCCGGCCGTCCGTCTAAA TCGACGCGGCCGGCCGCGCGCCGAACCACGCATCGTGGCGAATGCCGTGTTGTGGATACTCACAACCGGCGAGCCCTGGT CGAAACTGCCCGGCCGCTATCCGTCGGGTCCCACTTGCCGGCGCCGTTTTGAAGAGTGGCAGTTGAACGGCACGCTCCTC GAGATGGTTCGGCTGCTGTCGCAAACCGGGCGCACCTTTGCGTACGTCCCCCAGCCGGCGCCGCCCGTCGCGGCCAAACC TGCGGCACCGGTAGCGGAAAGCCCGCGCGCGCGCGACGAAACGCTGCGCGGCGTGTCCTGGAGAAGTCCCGAGTCGTGGC AGGCGCCCGGCGTGTCCAACAGCCTGAGCCACTGGCGTTCGGCCGATCCGATTGCGGACATTACCCGTCAGTTGTCAGGA GCAGCGCACGTCGCGCCAGACGTGCCGCCGGTATCGCGCGCGCCGGCCGCACCCGCACGATATGTCGATGTCGCGAGCCC GCACGCGTTTCGTCCGGACGAAGCGGGAGCGGTCAATGCGGCCATGCATGGTCTGAATTCCGCTGTCGCGACGGCGCGCG CCACACCCGCGCCCGACGACCGGCGCAGCCCGCTGTCATTGAGCCTCGCGCCACGCGGCACGGAAATCGCCGATCGTGGC TACGTGATTTACGTCGCGGCGGAGCGGGTGCCGAACGCCATGTTTCGCGCATGGGCGGAAATCATGAAGGACGGCAAACG CGTCGAGCGTTCCGGTCTCGTCGGCCCGCGCTTTGCGGATGCGGATGCGGCGGAGCACTACGCGCTCGACTGGGCGCGGC AGTGGATTGATCGCGAATGCCTCACGCTGGCGGCAGCAGCAGAATCCGCGGCTGCGGCTCGTGCATCGACGCAAGCATCG ACTCAGGCATCGGCGCATGTTTCACCAACTCCGGTGCCCACGGCGGCTCGTCCGCTGCCTGCCTTGCGCCACGTGCCCGA ACCGGTCGCGGCCAGTCACGGCGCACCTTTGCATGGACCGCTGAACGCGTTTCGTGGTCCGCTGCGCCGTTATCCCAGCG AGCCGGCTACTGTCAACGCCGCGACCGAGAGCAGTGCATCGGATCGTTTTACGTCGTACCCAGAACTCATCTCCCACGCA GGGTGA
Upstream 100 bases:
>100_bases AAGACATATTTGTGCAACCGCGGGCTGCACACGGATCGTGAAAGTTGAATCCGTGGCGTCCCAAAGCCGCGGCCCGGCCA GGCTGCGTGGAGAAAATCCA
Downstream 100 bases:
>100_bases GCACGGCAGTTCCCCGCGGCCGGTAGGAGCAACCGCCGCAGGTTCCCGCTTCATTCGTTGTGATTCACTGGTGATGTCAG AAGGACGCCGTTCGCCGACG
Product: putative transposase A-like protein
Products: NA
Alternate protein names: Transposase; IS5 Family Transposase OrfA; Transposase Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MFFDELSNDEWALLAALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQLNGTLL EMVRLLSQTGRTFAYVPQPAPPVAAKPAAPVAESPRARDETLRGVSWRSPESWQAPGVSNSLSHWRSADPIADITRQLSG AAHVAPDVPPVSRAPAAPARYVDVASPHAFRPDEAGAVNAAMHGLNSAVATARATPAPDDRRSPLSLSLAPRGTEIADRG YVIYVAAERVPNAMFRAWAEIMKDGKRVERSGLVGPRFADADAAEHYALDWARQWIDRECLTLAAAAESAAAARASTQAS TQASAHVSPTPVPTAARPLPALRHVPEPVAASHGAPLHGPLNAFRGPLRRYPSEPATVNAATESSASDRFTSYPELISHA G
Sequences:
>Translated_401_residues MFFDELSNDEWALLAALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQLNGTLL EMVRLLSQTGRTFAYVPQPAPPVAAKPAAPVAESPRARDETLRGVSWRSPESWQAPGVSNSLSHWRSADPIADITRQLSG AAHVAPDVPPVSRAPAAPARYVDVASPHAFRPDEAGAVNAAMHGLNSAVATARATPAPDDRRSPLSLSLAPRGTEIADRG YVIYVAAERVPNAMFRAWAEIMKDGKRVERSGLVGPRFADADAAEHYALDWARQWIDRECLTLAAAAESAAAARASTQAS TQASAHVSPTPVPTAARPLPALRHVPEPVAASHGAPLHGPLNAFRGPLRRYPSEPATVNAATESSASDRFTSYPELISHA G >Mature_401_residues MFFDELSNDEWALLAALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQLNGTLL EMVRLLSQTGRTFAYVPQPAPPVAAKPAAPVAESPRARDETLRGVSWRSPESWQAPGVSNSLSHWRSADPIADITRQLSG AAHVAPDVPPVSRAPAAPARYVDVASPHAFRPDEAGAVNAAMHGLNSAVATARATPAPDDRRSPLSLSLAPRGTEIADRG YVIYVAAERVPNAMFRAWAEIMKDGKRVERSGLVGPRFADADAAEHYALDWARQWIDRECLTLAAAAESAAAARASTQAS TQASAHVSPTPVPTAARPLPALRHVPEPVAASHGAPLHGPLNAFRGPLRRYPSEPATVNAATESSASDRFTSYPELISHA G
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43102; Mature: 43102
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFDELSNDEWALLAALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRY CCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCHHEEEEEEEEEECCCCHHHCCCCC PSGPTCRRRFEEWQLNGTLLEMVRLLSQTGRTFAYVPQPAPPVAAKPAAPVAESPRARDE CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH TLRGVSWRSPESWQAPGVSNSLSHWRSADPIADITRQLSGAAHVAPDVPPVSRAPAAPAR HHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC YVDVASPHAFRPDEAGAVNAAMHGLNSAVATARATPAPDDRRSPLSLSLAPRGTEIADRG EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC YVIYVAAERVPNAMFRAWAEIMKDGKRVERSGLVGPRFADADAAEHYALDWARQWIDREC EEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LTLAAAAESAAAARASTQASTQASAHVSPTPVPTAARPLPALRHVPEPVAASHGAPLHGP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCC LNAFRGPLRRYPSEPATVNAATESSASDRFTSYPELISHAG HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFFDELSNDEWALLAALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRY CCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCHHEEEEEEEEEECCCCHHHCCCCC PSGPTCRRRFEEWQLNGTLLEMVRLLSQTGRTFAYVPQPAPPVAAKPAAPVAESPRARDE CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH TLRGVSWRSPESWQAPGVSNSLSHWRSADPIADITRQLSGAAHVAPDVPPVSRAPAAPAR HHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC YVDVASPHAFRPDEAGAVNAAMHGLNSAVATARATPAPDDRRSPLSLSLAPRGTEIADRG EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC YVIYVAAERVPNAMFRAWAEIMKDGKRVERSGLVGPRFADADAAEHYALDWARQWIDREC EEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LTLAAAAESAAAARASTQASTQASAHVSPTPVPTAARPLPALRHVPEPVAASHGAPLHGP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCC LNAFRGPLRRYPSEPATVNAATESSASDRFTSYPELISHAG HHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA