| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783515
Identifier: 91783515
GI number: 91783515
Start: 2368188
End: 2369657
Strand: Direct
Name: 91783515
Synonym: Bxe_A2300
Alternate gene names: NA
Gene position: 2368188-2369657 (Clockwise)
Preceding gene: 91783512
Following gene: 91783518
Centisome position: 48.37
GC content: 68.5
Gene sequence:
>1470_bases ATGAAGCGTGTCTTTACCCTGACCGGCTGGTGTTTTGCGATCGTGGCGGCATGGATTTGCGCGCCGGCGCTCGCGGCCGA TGATTTCGCACAGCGTTTTACGCTTCAACTCGACGAGGGCGCCGCGTATTACAGCGTGACGTTGCCGGCGGCCGTCTATG CGGCGAGCCAGCGCGGCGATCTCGGCGACGTGCGCATTTTCAACGGTGCGGGCGAATCGCTGCCGTACGCGCTCAGTGTG CCGCGCGAGCCCGCTCGCACACCGCCCACGCTGCGTCCGGTGCACTGGTTCCCGGTGCCACCCGCAGCCGCCAAAAGTTC CGGCGCGCCGCCCGGCGTTTCGATCGCCGGCGACGGTTCGTTGTACGCGACCTCGGCGCCGCCGGCCCGCGCGCAACACG ACACGGACCTTATCGATATCGGCAAGGTGTCGCAAACGAGTCACGTCAGCGCGTTGCTCGTGCACCTGCGCGACGACAAT TACCAGGGGCGTGTGAGCGTCGAAGCCAGCGACGATCTGCGTCACTGGCAACCCGCGGGCGACGCGCAACTCCTCAAGGT CAGCTATAACGGCAGCACGCTGAGCCAGGACCGGATCGAACTGGACGGCATGCATGCGCGTTACCTGCGCTTGCGCTGGC TCGACGGCGCGCCGTATGTCGACTCGCTGGACATGGAGATCCAGGCCGTTGCCGCCGAGCCGGCCCAACGCGCGGACCGG ACGTGGCGCGACGGTATCGTCGCCCATGCGGGACTGAAACCGGGCGAGTATTTCTTCAGCACCGGCGGCGCGTATCCCGT CGACCGGTTGCGGCTGAATCTGCCTCAGCCGAATACGGTGGCGCCGGCTGTCGTCTATTCGCGTACGGGGCTGGAGGCGC CGTGGCGCGAAGTCGCGGGCGCGATGCTGTTCCGGCTGCACAACGGCGCGGTTGAGCAGAGCAATTCTTCGCTCGAATTG ACGCCCGACACGGATCGTCAATGGCGCGTGGTGGTCGACACGCGCAACGGTGGACTGGGCGCCGGAAGCTTGACCGTTGC CGCGGGCTGGCGTCCGGCAACGCTGACGTTCGTCGCACGCGGTGCGGCGCCGTTCACTTTGGCGGTGGGGAATGCGGCGA CGGCATCGGCGGCGGTGAGCCGGGACAATCTGTTGATCGGCGCTTCAGCGGTGGCCGCGACGGCGCGCCTGGGTGAGGCG TTGTCCGCCGAGCAGGCCGCGAGTGCGCAGGCCGCGAGTCGCGGCCCGGATGCCATGCGCCGGTACTGGCTGTGGGCGGC GCTGCTGCTGGCCGTTGGTTCGCTCGGGGCGATTGCCTGGCGGCTCGCACGTCGTGCCCAGCCTCCTGCGGGTGCTGCGT CAGGCGCTGCGGGCAGCGGGTCGGCAGTGTCCGGGATAGCAGGCGCAACAAGCGCGACCACTAACAGTCCCGGTGCGGCC GACGCCAACGGTCAAGGCGGCAACGGCTGA
Upstream 100 bases:
>100_bases ATCGGGTGGATCGTATCGTTTACCGGCATCGGGTTGATGTAGCTGCTGATCGGCCACTCTCGCCGTTGCCGCCCAAGGCT TGAGTCCTGGAAATTGAGCA
Downstream 100 bases:
>100_bases ACCCGGCGGCCGAATACGGCGTGCAGGTCACTCCTCGCGCGCCGTCATCGTGCCGATGATCTTGTCGAGCGCGAGCCCGA AGGCCAGTTGCTCCTGTTCG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MKRVFTLTGWCFAIVAAWICAPALAADDFAQRFTLQLDEGAAYYSVTLPAAVYAASQRGDLGDVRIFNGAGESLPYALSV PREPARTPPTLRPVHWFPVPPAAAKSSGAPPGVSIAGDGSLYATSAPPARAQHDTDLIDIGKVSQTSHVSALLVHLRDDN YQGRVSVEASDDLRHWQPAGDAQLLKVSYNGSTLSQDRIELDGMHARYLRLRWLDGAPYVDSLDMEIQAVAAEPAQRADR TWRDGIVAHAGLKPGEYFFSTGGAYPVDRLRLNLPQPNTVAPAVVYSRTGLEAPWREVAGAMLFRLHNGAVEQSNSSLEL TPDTDRQWRVVVDTRNGGLGAGSLTVAAGWRPATLTFVARGAAPFTLAVGNAATASAAVSRDNLLIGASAVAATARLGEA LSAEQAASAQAASRGPDAMRRYWLWAALLLAVGSLGAIAWRLARRAQPPAGAASGAAGSGSAVSGIAGATSATTNSPGAA DANGQGGNG
Sequences:
>Translated_489_residues MKRVFTLTGWCFAIVAAWICAPALAADDFAQRFTLQLDEGAAYYSVTLPAAVYAASQRGDLGDVRIFNGAGESLPYALSV PREPARTPPTLRPVHWFPVPPAAAKSSGAPPGVSIAGDGSLYATSAPPARAQHDTDLIDIGKVSQTSHVSALLVHLRDDN YQGRVSVEASDDLRHWQPAGDAQLLKVSYNGSTLSQDRIELDGMHARYLRLRWLDGAPYVDSLDMEIQAVAAEPAQRADR TWRDGIVAHAGLKPGEYFFSTGGAYPVDRLRLNLPQPNTVAPAVVYSRTGLEAPWREVAGAMLFRLHNGAVEQSNSSLEL TPDTDRQWRVVVDTRNGGLGAGSLTVAAGWRPATLTFVARGAAPFTLAVGNAATASAAVSRDNLLIGASAVAATARLGEA LSAEQAASAQAASRGPDAMRRYWLWAALLLAVGSLGAIAWRLARRAQPPAGAASGAAGSGSAVSGIAGATSATTNSPGAA DANGQGGNG >Mature_489_residues MKRVFTLTGWCFAIVAAWICAPALAADDFAQRFTLQLDEGAAYYSVTLPAAVYAASQRGDLGDVRIFNGAGESLPYALSV PREPARTPPTLRPVHWFPVPPAAAKSSGAPPGVSIAGDGSLYATSAPPARAQHDTDLIDIGKVSQTSHVSALLVHLRDDN YQGRVSVEASDDLRHWQPAGDAQLLKVSYNGSTLSQDRIELDGMHARYLRLRWLDGAPYVDSLDMEIQAVAAEPAQRADR TWRDGIVAHAGLKPGEYFFSTGGAYPVDRLRLNLPQPNTVAPAVVYSRTGLEAPWREVAGAMLFRLHNGAVEQSNSSLEL TPDTDRQWRVVVDTRNGGLGAGSLTVAAGWRPATLTFVARGAAPFTLAVGNAATASAAVSRDNLLIGASAVAATARLGEA LSAEQAASAQAASRGPDAMRRYWLWAALLLAVGSLGAIAWRLARRAQPPAGAASGAAGSGSAVSGIAGATSATTNSPGAA DANGQGGNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50980; Mature: 50980
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVFTLTGWCFAIVAAWICAPALAADDFAQRFTLQLDEGAAYYSVTLPAAVYAASQRGD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCHHHHHHCCCCC LGDVRIFNGAGESLPYALSVPREPARTPPTLRPVHWFPVPPAAAKSSGAPPGVSIAGDGS CCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCEEEECCCC LYATSAPPARAQHDTDLIDIGKVSQTSHVSALLVHLRDDNYQGRVSVEASDDLRHWQPAG EEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHCCCCCC DAQLLKVSYNGSTLSQDRIELDGMHARYLRLRWLDGAPYVDSLDMEIQAVAAEPAQRADR CCEEEEEEECCCCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHCC TWRDGIVAHAGLKPGEYFFSTGGAYPVDRLRLNLPQPNTVAPAVVYSRTGLEAPWREVAG HHHCCEEEECCCCCCCEEEECCCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCHHHHHH AMLFRLHNGAVEQSNSSLELTPDTDRQWRVVVDTRNGGLGAGSLTVAAGWRPATLTFVAR HHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEC GAAPFTLAVGNAATASAAVSRDNLLIGASAVAATARLGEALSAEQAASAQAASRGPDAMR CCCCEEEEECCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RYWLWAALLLAVGSLGAIAWRLARRAQPPAGAASGAAGSGSAVSGIAGATSATTNSPGAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DANGQGGNG CCCCCCCCC >Mature Secondary Structure MKRVFTLTGWCFAIVAAWICAPALAADDFAQRFTLQLDEGAAYYSVTLPAAVYAASQRGD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCHHHHHHCCCCC LGDVRIFNGAGESLPYALSVPREPARTPPTLRPVHWFPVPPAAAKSSGAPPGVSIAGDGS CCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCEEEECCCC LYATSAPPARAQHDTDLIDIGKVSQTSHVSALLVHLRDDNYQGRVSVEASDDLRHWQPAG EEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHCCCCCC DAQLLKVSYNGSTLSQDRIELDGMHARYLRLRWLDGAPYVDSLDMEIQAVAAEPAQRADR CCEEEEEEECCCCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHCC TWRDGIVAHAGLKPGEYFFSTGGAYPVDRLRLNLPQPNTVAPAVVYSRTGLEAPWREVAG HHHCCEEEECCCCCCCEEEECCCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCHHHHHH AMLFRLHNGAVEQSNSSLELTPDTDRQWRVVVDTRNGGLGAGSLTVAAGWRPATLTFVAR HHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEC GAAPFTLAVGNAATASAAVSRDNLLIGASAVAATARLGEALSAEQAASAQAASRGPDAMR CCCCEEEEECCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RYWLWAALLLAVGSLGAIAWRLARRAQPPAGAASGAAGSGSAVSGIAGATSATTNSPGAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DANGQGGNG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA