| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783418
Identifier: 91783418
GI number: 91783418
Start: 2257127
End: 2257888
Strand: Direct
Name: 91783418
Synonym: Bxe_A2397
Alternate gene names: NA
Gene position: 2257127-2257888 (Clockwise)
Preceding gene: 91783416
Following gene: 91783419
Centisome position: 46.1
GC content: 54.2
Gene sequence:
>762_bases ATGCCCATGAAAGATCGTGCGCCTACATGGCTCACCCCTTCGCTTGAGCGAGATTTCGATCTGTTATCGGCAGACATGAA GCAGAGCATCCTTGAAGAGCGCGAACGGTGGCGCGTGGATGCTGAATCTACGCGGCACGCAAACGAAGCGTCATTGAATA GATTGGTAAAATCAATTGACGTGATCGCGTGGGCGACGATACCGGATCAACCGTTCTATACGCTTCACAAAGCGATCGAA ATCACGGCTCGAGCGATAACAGTTGCCCTTCACGGCATATCCGCGAGTGAGGTCGAAACGTCGGAATATTGGACCGACAC ACTTGCAAAGCATCAAGAGCGTCTTCACGCACTGGTCGAACTTGGTCGATTGGATGTATTCGATATACACACGGCCGGTG CCTGCGCATTTGAGTCTGGTCTGCCCGACTGGGCGCAGTGCGCTAACCTTGGTCTCACCCGGTCAGGGATGGCGACCTTT GCGCGAAGTCAGGGCGTGGAGATCGGCGATGACCAGAAACCCGGGAAGACGAACAAAAAGAAGCAAGACACGTTGCTTAG GGTCGTTGCAGCGTTAATCTACTTGCGCAATCAGCCGCGAAGCGGACTCGCCATTTCGACAGAAATAGCGAACTGGACCG AGGGGCAGGGAATCAACGTCTCCTCGAAGACGGTAAACAACTACATCACGGACATCGAGAAAGAGCTTGGCCTCTCGCGA AAGGAGCTCTGCCTGTCCGAACGGGGAGATGTGTCAGACTGA
Upstream 100 bases:
>100_bases GCCCGCCCTCGTAGAGGAATTTTCCCGAGAAAATGCAATTTTCCGATTGCGGGTAGTTACCTGACTCACCGCAAGCACAC TTCACGGCGAAGAAAACAGC
Downstream 100 bases:
>100_bases GCGCGGCGCGAGCCAGCATGTAGCTTGCGGGGATAAGCGTTTCTTTGCACGCCTGCATTAGACGTTTCCCACTTGAGCAA TATCTTCGCCTTCGTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPMKDRAPTWLTPSLERDFDLLSADMKQSILEERERWRVDAESTRHANEASLNRLVKSIDVIAWATIPDQPFYTLHKAIE ITARAITVALHGISASEVETSEYWTDTLAKHQERLHALVELGRLDVFDIHTAGACAFESGLPDWAQCANLGLTRSGMATF ARSQGVEIGDDQKPGKTNKKKQDTLLRVVAALIYLRNQPRSGLAISTEIANWTEGQGINVSSKTVNNYITDIEKELGLSR KELCLSERGDVSD
Sequences:
>Translated_253_residues MPMKDRAPTWLTPSLERDFDLLSADMKQSILEERERWRVDAESTRHANEASLNRLVKSIDVIAWATIPDQPFYTLHKAIE ITARAITVALHGISASEVETSEYWTDTLAKHQERLHALVELGRLDVFDIHTAGACAFESGLPDWAQCANLGLTRSGMATF ARSQGVEIGDDQKPGKTNKKKQDTLLRVVAALIYLRNQPRSGLAISTEIANWTEGQGINVSSKTVNNYITDIEKELGLSR KELCLSERGDVSD >Mature_252_residues PMKDRAPTWLTPSLERDFDLLSADMKQSILEERERWRVDAESTRHANEASLNRLVKSIDVIAWATIPDQPFYTLHKAIEI TARAITVALHGISASEVETSEYWTDTLAKHQERLHALVELGRLDVFDIHTAGACAFESGLPDWAQCANLGLTRSGMATFA RSQGVEIGDDQKPGKTNKKKQDTLLRVVAALIYLRNQPRSGLAISTEIANWTEGQGINVSSKTVNNYITDIEKELGLSRK ELCLSERGDVSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28191; Mature: 28060
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKDRAPTWLTPSLERDFDLLSADMKQSILEERERWRVDAESTRHANEASLNRLVKSID CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH VIAWATIPDQPFYTLHKAIEITARAITVALHGISASEVETSEYWTDTLAKHQERLHALVE HHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGRLDVFDIHTAGACAFESGLPDWAQCANLGLTRSGMATFARSQGVEIGDDQKPGKTNKK HCCCCEEEECCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH KQDTLLRVVAALIYLRNQPRSGLAISTEIANWTEGQGINVSSKTVNNYITDIEKELGLSR HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH KELCLSERGDVSD HHHHHHCCCCCCC >Mature Secondary Structure PMKDRAPTWLTPSLERDFDLLSADMKQSILEERERWRVDAESTRHANEASLNRLVKSID CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH VIAWATIPDQPFYTLHKAIEITARAITVALHGISASEVETSEYWTDTLAKHQERLHALVE HHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGRLDVFDIHTAGACAFESGLPDWAQCANLGLTRSGMATFARSQGVEIGDDQKPGKTNKK HCCCCEEEECCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH KQDTLLRVVAALIYLRNQPRSGLAISTEIANWTEGQGINVSSKTVNNYITDIEKELGLSR HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH KELCLSERGDVSD HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA