| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gltJ [H]
Identifier: 91783383
GI number: 91783383
Start: 2230272
End: 2230979
Strand: Direct
Name: gltJ [H]
Synonym: Bxe_A2433
Alternate gene names: 91783383
Gene position: 2230272-2230979 (Clockwise)
Preceding gene: 91783382
Following gene: 91783384
Centisome position: 45.55
GC content: 61.02
Gene sequence:
>708_bases ATGAGCCTCGACTTCTCCTGGCTGGCCGATCCGGTCTATCAGACGTGGCTGTTGCGCGGCATCGGCACCACCGTGGCGGT GTGCGTGTGCGCGATCGCGCTGATGTTCGTGATCGGCATTATCGGCGCGGCACTGATCTATTTTCGCGTGCCGGTGCTGG AGACGCTGACCACCGTCGTCGTCGAGTTGCTGCGCAATACGCCGCCTCTCGTGCAGTTGTTCGTGCTGTATTTCACGCTG TCGGAACTGGGTTTGTCGGTGCGTAATCTGGCGACCGGTCAGCAGATTCCGGTGTTCAGCGGCTTTACGTGCATGGTGTT GTCGCTGGCGCTTTACAACGGCAGCATCGCGGTGGAAATCGTGCGCTCGGGGTTGCATGCGGTGCCCGATGCGACCGTCG ATGCCGCGCGCAGTCTCGGCTATTCGCGGCTGCGCATCTTCTGGCACATTCAGTTGCCGATGGCGATGCGCCTGTCCACC ACTCAGATGACCAACAACATCGTCAGTCTGATCAAGACGTCGTCACAGGCGGCGTTCGTCGCGGTCGCCGACGTGATGTA TTACGCGACGCAGATCACGCTGGAAAACTTCCGCAATCTCGAAGTGATGCTGACGGTGTGGGTCTGCTATCTGGTGCTCG CGTCATTCGCATCAACGGTGGCGGGGCGCATCGGCCGCGCGGTGCGCATTCCGGGGTATGGCGTATGA
Upstream 100 bases:
>100_bases GGAAAAGAGGTACAACATGGGCACGAGCAAGTTCGTCACCGAACAGCAGGCGGCGGCTTCGAAGTAATATGCACTTGCCA AAGCCGCTCAAGGAACGCCG
Downstream 100 bases:
>100_bases GTACGGCGGCCACCGTCAAACCCGGCCGCTCGTCGCGCGCGATGCAACCGGAAACGCGTGCCTTCGCGTACGGCATGATC GGCGTGCCGCTGCTGCTGGT
Product: polar amino acid ABC transporter inner membrane protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVVVELLRNTPPLVQLFVLYFTL SELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEIVRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLST TQMTNNIVSLIKTSSQAAFVAVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV
Sequences:
>Translated_235_residues MSLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVVVELLRNTPPLVQLFVLYFTL SELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEIVRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLST TQMTNNIVSLIKTSSQAAFVAVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV >Mature_234_residues SLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVVVELLRNTPPLVQLFVLYFTLS ELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEIVRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLSTT QMTNNIVSLIKTSSQAAFVAVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=241, Percent_Identity=25.7261410788382, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787030, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788226, Length=222, Percent_Identity=25.2252252252252, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787087, Length=229, Percent_Identity=26.6375545851528, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788645, Length=155, Percent_Identity=26.4516129032258, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25737; Mature: 25606
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VELLRNTPPLVQLFVLYFTLSELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEI HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH VRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLSTTQMTNNIVSLIKTSSQAAFV HHHHHHHCCCHHHHHHHHCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHH AVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC >Mature Secondary Structure SLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VELLRNTPPLVQLFVLYFTLSELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIAVEI HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH VRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLSTTQMTNNIVSLIKTSSQAAFV HHHHHHHCCCHHHHHHHHCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHH AVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRIPGYGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]