| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783362
Identifier: 91783362
GI number: 91783362
Start: 2206990
End: 2207952
Strand: Direct
Name: 91783362
Synonym: Bxe_A2457
Alternate gene names: NA
Gene position: 2206990-2207952 (Clockwise)
Preceding gene: 91783361
Following gene: 91783363
Centisome position: 45.08
GC content: 71.24
Gene sequence:
>963_bases ATGGACTGTAACGAAGCGCGGCCGCTCCTCGATGCGAACGCCGATCACGAATTGCCCGCGCCGGATGCCCGGCGCGTCCA GCAGCACATCGAGAGCTGCGCCGCCTGCCGGCGCGAAAGCGAGAACCTGCGGGCCTTGAGCGGTGCGCTGCGGGCGGCGC CTTATCATCGTGCGCCGCAGTCGCTGCGCGAGCGGATTGTCGCCGGATTGCCGTCTGTCGACGAGCCGGCTGCGGCGGCC GAGGCGCCCGTTGAGCGCGTCTCGGGCGTCACGAGCGTCACGCCGCCGCAGCGCGAACGGGCGCGGCGCGGCTGGCTCGA CCGTTGGCTGGACGGCTGGCGCGCCCCGCAAGGCGGCTTCGGCTGGCCGACGGGCGCGGGCGGCCCGGTGGGCTCAGGCG GCGTGTTTGCGCGTGGCTGGCTGGTGGTGCTGGTCGTCGCGTTGTGCGCGGTGGCGGCGGGCGTGGCGTTGAATCTGCGA CGGCCGGCGGAATTCGGGCCGTTCGCCGACGAACTGGTGGAAAGCCATGTGCGCGCGCAGGTGTCGGGACGCGACATCGA CGTGATCTCGACGGACCGGCATACGGTCAAGCCGTGGTTCAACGGCCGGCTCGACTATTCGCCGCCGGTCGAGGATCTGG CGGCGAACGGTTTCGCGCTGGAGGGCGGGCGCCTCGATTATCTCGCGCATCAGCGCGTGGCCGTGCTGGTGTACCGCTAC CAGAAGCACGTGATCGACGTGTACGTGTTTCCACAGGCCGGTGCCGGCGGCACGGGCCGGAACACGGACGGCGCCGCGCC GGCCACGCTCGCTCGCGAAGGCTACTCGATTGCGCACTGGAACGCGGAGGGCATGACCTGGTGGGCGATTTCGGACGCCG CGCCCGACGCGCTGAAGGGGCTGGAAGTGGCGCTGAAGGCGCGTTTGCAAAGCGGTAGCGAGCGGACGGAGGCGGGGTCC TAG
Upstream 100 bases:
>100_bases TCGGCCACGGCGAGCGTGACGCCCCTGCGGGCGTCCGCCAACGGCCGGCCACTCAACACGCCGGGCGGCAGCGCCGCCGG CAACGCTCAGGAGACGCCAG
Downstream 100 bases:
>100_bases ACGGTCCGCCACCGCCTAAACCCTTGAAAACACACCCGATTCGCGCGCCGCAATAACGGGATATCTTGCAACCCGGCCCC ATTCGGGTTATACTCTTTGG
Product: transmembrane transcriptional regulator (anti-sigma factor)
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQSLRERIVAGLPSVDEPAAAA EAPVERVSGVTSVTPPQRERARRGWLDRWLDGWRAPQGGFGWPTGAGGPVGSGGVFARGWLVVLVVALCAVAAGVALNLR RPAEFGPFADELVESHVRAQVSGRDIDVISTDRHTVKPWFNGRLDYSPPVEDLAANGFALEGGRLDYLAHQRVAVLVYRY QKHVIDVYVFPQAGAGGTGRNTDGAAPATLAREGYSIAHWNAEGMTWWAISDAAPDALKGLEVALKARLQSGSERTEAGS
Sequences:
>Translated_320_residues MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQSLRERIVAGLPSVDEPAAAA EAPVERVSGVTSVTPPQRERARRGWLDRWLDGWRAPQGGFGWPTGAGGPVGSGGVFARGWLVVLVVALCAVAAGVALNLR RPAEFGPFADELVESHVRAQVSGRDIDVISTDRHTVKPWFNGRLDYSPPVEDLAANGFALEGGRLDYLAHQRVAVLVYRY QKHVIDVYVFPQAGAGGTGRNTDGAAPATLAREGYSIAHWNAEGMTWWAISDAAPDALKGLEVALKARLQSGSERTEAGS >Mature_320_residues MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQSLRERIVAGLPSVDEPAAAA EAPVERVSGVTSVTPPQRERARRGWLDRWLDGWRAPQGGFGWPTGAGGPVGSGGVFARGWLVVLVVALCAVAAGVALNLR RPAEFGPFADELVESHVRAQVSGRDIDVISTDRHTVKPWFNGRLDYSPPVEDLAANGFALEGGRLDYLAHQRVAVLVYRY QKHVIDVYVFPQAGAGGTGRNTDGAAPATLAREGYSIAHWNAEGMTWWAISDAAPDALKGLEVALKARLQSGSERTEAGS
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34375; Mature: 34375
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH SLRERIVAGLPSVDEPAAAAEAPVERVSGVTSVTPPQRERARRGWLDRWLDGWRAPQGGF HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GWPTGAGGPVGSGGVFARGWLVVLVVALCAVAAGVALNLRRPAEFGPFADELVESHVRAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH VSGRDIDVISTDRHTVKPWFNGRLDYSPPVEDLAANGFALEGGRLDYLAHQRVAVLVYRY CCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH QKHVIDVYVFPQAGAGGTGRNTDGAAPATLAREGYSIAHWNAEGMTWWAISDAAPDALKG HHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHH LEVALKARLQSGSERTEAGS HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH SLRERIVAGLPSVDEPAAAAEAPVERVSGVTSVTPPQRERARRGWLDRWLDGWRAPQGGF HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GWPTGAGGPVGSGGVFARGWLVVLVVALCAVAAGVALNLRRPAEFGPFADELVESHVRAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH VSGRDIDVISTDRHTVKPWFNGRLDYSPPVEDLAANGFALEGGRLDYLAHQRVAVLVYRY CCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH QKHVIDVYVFPQAGAGGTGRNTDGAAPATLAREGYSIAHWNAEGMTWWAISDAAPDALKG HHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHH LEVALKARLQSGSERTEAGS HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA