| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tas [H]
Identifier: 91783341
GI number: 91783341
Start: 2186032
End: 2187132
Strand: Direct
Name: tas [H]
Synonym: Bxe_A2478
Alternate gene names: 91783341
Gene position: 2186032-2187132 (Clockwise)
Preceding gene: 91783338
Following gene: 91783342
Centisome position: 44.65
GC content: 62.49
Gene sequence:
>1101_bases ATGGTAACGTCAGCGCTTTTCGTTCAACCAATCAACAGGACAAGTTCGATGCAATATCGCAGCCTTGGCGATTCCGATGT GCAGGTTAGCCTGATCGGTCTCGGCACCATGACATGGGGCGAGCAGAACACGGAGCAGGAAGCGCACGCGCAGATCGACT ACGCGCTCGATCACGGCGTCAATCTGATCGACACCGCCGAAATGTACCCGGTGCCGCCGATTGCCGAGACGCAAGGTTCG ACGGAGCGCTTCATCGGCACGTGGCTCGCGCAGCATCGCAGCGCGCGCGAAAAAATCGTGCTCGCCACCAAGATCGCCGG CCCGGCGCGTCAGCCGCATAACCCGCGCCATATTCGTGGCGAAGGCAACCAGTTCGACCGCAAGAATCTCACCGAAGCGC TCAACGACAGTCTGAAGCGCCTGCAAACGGAGTACGTCGATCTGTATCAGCTGCACTGGCCGGATCGCAGCACGATGACG TTCGGCCGCGCCTCGTATCCGTGGGTCGACGACGCGTACACGGTGCCGATCGAAGAGACGTTGTCCGTACTCGCCGAGTT CGTCAAGGCGGGCAAGGTGCGTCACATCGGCGTGTCGAATGAAACGCCCTGGGGCGTCGCGCAGTTTCTGCGCGCGGCCG AAAAGCTCGGCTTGCCGCGCATCGTCAGCATCCAGAATCCGTACAGCCTGGTCAATCGCACGTACGAAGCGGGTCTGTCC GAGTACGCGCATCGCGACAACGTCGGCCTGCTGGCCTATTCGCCGCTGGCCTTCGGCTGGTTGTCGGGCAAGTATGAAGG CGGCGCGCGTCCGGCCGGCGCCCGCATCACGCGCTTCGATCGCTTCCAGCGCTACAGCAAGCCGCAAGCGGTGCAGGCCA CCACGCGTTACGTCGAACTCGCGAAGCGCCACGGTCTGGCGCCCGCGCAGTTCGCGCTCGCGTTCGTCAATAGCCGGCCG TTCGTGACCAGCAATCTGATCGGCGCGACCTCGCTCGATCAATTGAAGGAAAACATTGCCAGCGTCGACGTGAAACTCTC GCCGGACGTGCTCGCGGAAATCGACGCGCTGCATGAATTGCAGCCGAATCCCGCGCCTTGA
Upstream 100 bases:
>100_bases TCATTGCGGCAGGGGCGGCGCGGAGAAACCTTGCGCGTGGAAAAACGGGCGGCGCCCGTCGGAACCGCATTTTAGCGTGC CCTGCAGGTATCGCGCGGGC
Downstream 100 bases:
>100_bases TGCGCGAATGGCGGCGCGCTGGTTCGAGTCGGGCTTGAAAGAAGAATGAAGTCTGCGTCCCGCCCGAATCGCCGCGCTGC CCCAGGTGCCCCGGCTTCAT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MVTSALFVQPINRTSSMQYRSLGDSDVQVSLIGLGTMTWGEQNTEQEAHAQIDYALDHGVNLIDTAEMYPVPPIAETQGS TERFIGTWLAQHRSAREKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTEYVDLYQLHWPDRSTMT FGRASYPWVDDAYTVPIEETLSVLAEFVKAGKVRHIGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLVNRTYEAGLS EYAHRDNVGLLAYSPLAFGWLSGKYEGGARPAGARITRFDRFQRYSKPQAVQATTRYVELAKRHGLAPAQFALAFVNSRP FVTSNLIGATSLDQLKENIASVDVKLSPDVLAEIDALHELQPNPAP
Sequences:
>Translated_366_residues MVTSALFVQPINRTSSMQYRSLGDSDVQVSLIGLGTMTWGEQNTEQEAHAQIDYALDHGVNLIDTAEMYPVPPIAETQGS TERFIGTWLAQHRSAREKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTEYVDLYQLHWPDRSTMT FGRASYPWVDDAYTVPIEETLSVLAEFVKAGKVRHIGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLVNRTYEAGLS EYAHRDNVGLLAYSPLAFGWLSGKYEGGARPAGARITRFDRFQRYSKPQAVQATTRYVELAKRHGLAPAQFALAFVNSRP FVTSNLIGATSLDQLKENIASVDVKLSPDVLAEIDALHELQPNPAP >Mature_366_residues MVTSALFVQPINRTSSMQYRSLGDSDVQVSLIGLGTMTWGEQNTEQEAHAQIDYALDHGVNLIDTAEMYPVPPIAETQGS TERFIGTWLAQHRSAREKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTEYVDLYQLHWPDRSTMT FGRASYPWVDDAYTVPIEETLSVLAEFVKAGKVRHIGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLVNRTYEAGLS EYAHRDNVGLLAYSPLAFGWLSGKYEGGARPAGARITRFDRFQRYSKPQAVQATTRYVELAKRHGLAPAQFALAFVNSRP FVTSNLIGATSLDQLKENIASVDVKLSPDVLAEIDALHELQPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=363, Percent_Identity=31.129476584022, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI4504825, Length=361, Percent_Identity=31.0249307479224, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI27436964, Length=364, Percent_Identity=29.3956043956044, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI27436962, Length=362, Percent_Identity=29.5580110497238, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI27436971, Length=369, Percent_Identity=30.3523035230352, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI27436966, Length=363, Percent_Identity=29.4765840220386, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI223718702, Length=363, Percent_Identity=25.8953168044077, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI41152114, Length=267, Percent_Identity=27.3408239700375, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI41327764, Length=348, Percent_Identity=26.1494252873563, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=58, Blast_Score=416, Evalue=1e-117, Organism=Escherichia coli, GI87081735, Length=361, Percent_Identity=30.7479224376731, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1789375, Length=352, Percent_Identity=31.5340909090909, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1788070, Length=342, Percent_Identity=28.9473684210526, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788081, Length=345, Percent_Identity=27.2463768115942, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787674, Length=307, Percent_Identity=28.6644951140065, Blast_Score=75, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=362, Percent_Identity=26.7955801104972, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6323998, Length=326, Percent_Identity=26.3803680981595, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=321, Percent_Identity=25.2336448598131, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319951, Length=321, Percent_Identity=23.98753894081, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=266, Percent_Identity=22.9323308270677, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320576, Length=303, Percent_Identity=25.4125412541254, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24644950, Length=338, Percent_Identity=25.4437869822485, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24646159, Length=349, Percent_Identity=25.5014326647564, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646155, Length=357, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24663317, Length=344, Percent_Identity=23.8372093023256, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 40712; Mature: 40712
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSALFVQPINRTSSMQYRSLGDSDVQVSLIGLGTMTWGEQNTEQEAHAQIDYALDHGV CCCCCCEEEECCCCCCCHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCC NLIDTAEMYPVPPIAETQGSTERFIGTWLAQHRSAREKIVLATKIAGPARQPHNPRHIRG CEEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEECC EGNQFDRKNLTEALNDSLKRLQTEYVDLYQLHWPDRSTMTFGRASYPWVDDAYTVPIEET CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCCCCEECCHHHH LSVLAEFVKAGKVRHIGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLVNRTYEAGLS HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH EYAHRDNVGLLAYSPLAFGWLSGKYEGGARPAGARITRFDRFQRYSKPQAVQATTRYVEL HHHHCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH AKRHGLAPAQFALAFVNSRPFVTSNLIGATSLDQLKENIASVDVKLSPDVLAEIDALHEL HHHCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHC QPNPAP CCCCCC >Mature Secondary Structure MVTSALFVQPINRTSSMQYRSLGDSDVQVSLIGLGTMTWGEQNTEQEAHAQIDYALDHGV CCCCCCEEEECCCCCCCHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCC NLIDTAEMYPVPPIAETQGSTERFIGTWLAQHRSAREKIVLATKIAGPARQPHNPRHIRG CEEECHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEECC EGNQFDRKNLTEALNDSLKRLQTEYVDLYQLHWPDRSTMTFGRASYPWVDDAYTVPIEET CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCCCCEECCHHHH LSVLAEFVKAGKVRHIGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLVNRTYEAGLS HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH EYAHRDNVGLLAYSPLAFGWLSGKYEGGARPAGARITRFDRFQRYSKPQAVQATTRYVEL HHHHCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH AKRHGLAPAQFALAFVNSRPFVTSNLIGATSLDQLKENIASVDVKLSPDVLAEIDALHEL HHHCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHC QPNPAP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]