| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ssuC [H]
Identifier: 91783327
GI number: 91783327
Start: 2175525
End: 2176367
Strand: Direct
Name: ssuC [H]
Synonym: Bxe_A2492
Alternate gene names: 91783327
Gene position: 2175525-2176367 (Clockwise)
Preceding gene: 91783326
Following gene: 91783328
Centisome position: 44.44
GC content: 64.06
Gene sequence:
>843_bases ATGGCTCAATCCACTGTAAGCACGGATCGGGACGAAAGCGCTGAGTCCGGCGCGGGTTCGAACACGTTGCGCCGGATCGG CGCGCATCTCGCGCCGTGGCTTGCGCCGCTCGCGATTCTGCTGGTGTGGGAATTCGCCGCGAGGAGCGGCGTGCTGTCCA CGCGCGTGCTGCCCGAACCGCTCGCGGTGGTGAAGGCCGCGTGGTCGCTGATCCAGTCCGGTGAAATGTGGGCGGACGTG AAGGTCAGCACGTGGCGCGCGGTGTCGGGTTTCGCGATCGGCGGCGGCATCGGGCTCGTGCTCGGGCTCGCCACGGGTCT GTTTAAACCCGCCGAGATCGTGCTCGATTCGACCGTGCAAATGGTCCGCAACATCCCGGCGCTCGCGATGATTCCACTCG TGATCCTGTGGTTCGGCATCGAGGAGGAAGCGAAGGTGTTTCTCGTCGCGCTGGGCGTGTTTTTCCCGATCTATGTGAAC ACTTTCCACGGCATCCGTTCGGTCGATGCCAATCTGATCGAAATGGCGCGCAGTTATGGCGTGAGAGGTTTCGCGCTGTA CCGGCATGTGATTCTGCCGGGCGCGTTGCCGTCGATCCTGGTCGGCGTGCGCTTCGCGTTCGGGCTGATGTGGGTCACGC TGATCGTCGCCGAGACCATTTCCGCGCAATCGGGCATCGGCTACATGACGATGAACGCGCGCGAGTTTCTGCAAACCGAC GTGGTGGTGGTCGGCATTCTGCTCTACGCGGCGCTCGGCAAGCTCGCCGACGTGCTGGCCAAGAGTCTCGAGCGCGTCTC GCTGCGCTGGCACCCGGCCTATCAGCGAGGAGCGAAGCCATGA
Upstream 100 bases:
>100_bases ATCGTCGGCAACAACTATCTGCCGAAGGCGGCCAGTTCGAGCTGAGTGCAGTGCTGCCAACGGCATGCACGATCATCGAC AGGCAATGAGGAAGGCAAGC
Downstream 100 bases:
>100_bases GCGCGACGACATGGTCGGCGTCGTTCGGCGGGATTGCCGGCAGCGATCTCGAAGCCGAACTGGCGCAAGCGCGCACCGTC GATCACGACGCGAACGAAGC
Product: ABC aliphatic sulfonates transporter, innermembrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MAQSTVSTDRDESAESGAGSNTLRRIGAHLAPWLAPLAILLVWEFAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADV KVSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMVRNIPALAMIPLVILWFGIEEEAKVFLVALGVFFPIYVN TFHGIRSVDANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETISAQSGIGYMTMNAREFLQTD VVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKP
Sequences:
>Translated_280_residues MAQSTVSTDRDESAESGAGSNTLRRIGAHLAPWLAPLAILLVWEFAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADV KVSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMVRNIPALAMIPLVILWFGIEEEAKVFLVALGVFFPIYVN TFHGIRSVDANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETISAQSGIGYMTMNAREFLQTD VVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKP >Mature_279_residues AQSTVSTDRDESAESGAGSNTLRRIGAHLAPWLAPLAILLVWEFAARSGVLSTRVLPEPLAVVKAAWSLIQSGEMWADVK VSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQMVRNIPALAMIPLVILWFGIEEEAKVFLVALGVFFPIYVNT FHGIRSVDANLIEMARSYGVRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETISAQSGIGYMTMNAREFLQTDV VVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKP
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=65.587044534413, Blast_Score=309, Evalue=1e-85, Organism=Escherichia coli, GI1786564, Length=245, Percent_Identity=34.6938775510204, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30202; Mature: 30071
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSTVSTDRDESAESGAGSNTLRRIGAHLAPWLAPLAILLVWEFAARSGVLSTRVLPEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH LAVVKAAWSLIQSGEMWADVKVSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQ HHHHHHHHHHHHCCCCEEEEEHHHHHHHCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHH MVRNIPALAMIPLVILWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSVDANLIEMARSYG HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETISAQSGIGYMTMNAREFLQTD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH VVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure AQSTVSTDRDESAESGAGSNTLRRIGAHLAPWLAPLAILLVWEFAARSGVLSTRVLPEP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH LAVVKAAWSLIQSGEMWADVKVSTWRAVSGFAIGGGIGLVLGLATGLFKPAEIVLDSTVQ HHHHHHHHHHHHCCCCEEEEEHHHHHHHCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHH MVRNIPALAMIPLVILWFGIEEEAKVFLVALGVFFPIYVNTFHGIRSVDANLIEMARSYG HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VRGFALYRHVILPGALPSILVGVRFAFGLMWVTLIVAETISAQSGIGYMTMNAREFLQTD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH VVVVGILLYAALGKLADVLAKSLERVSLRWHPAYQRGAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]