Click here to switch to the map view.

The map label for this gene is insF1 [C]

Identifier: 91783274

GI number: 91783274

Start: 2115879

End: 2116706

Strand: Direct

Name: insF1 [C]

Synonym: Bxe_A2546

Alternate gene names: 91783274

Gene position: 2115879-2116706 (Clockwise)

Preceding gene: 91783273

Following gene: 91783278

Centisome position: 43.22

GC content: 55.56

Gene sequence:

>828_bases
GTGCTATGTCGGGTGTTCGAGGTGGGAGCCAGTAGCTATTACGCTTGGCGTCGACGTGCTGAGTCGCCACGTGCACAGGA
GAACGCACGGCTTGAAGTCCAAATTGCTGCAGCCCATGAACGAACCCGGCACACTTATGGACGCGAGCGGCTGCAAGCCG
ATTTGCGAGATCACGGCGTGCGCGTTGGTCTCCATCGCATCAGGCGCATTCGCTCCAAACTGGGACTTCGTTGCAAGCAG
AAGCGCAAGTTCAGAAATACAACGGATTCCAAGCACGATCTGCCAGTCGCTCCGAATTTGCTAGAACGCAATTTTGACAT
GAGCGCGCCGAACCAGACTTGGGTAAGTGATATCACTTACTTATGGACCGACGAGGGCTGGTTGTATCTTGCTGGCATCA
AGGACCTGTTTAACGGCGAATTGGTCGGCTACGCCATGAGCGAACGGATGACTCGCAGCCTGGTGATGCAAGCGCTTTTC
AGCGCGGTGTCGCTCAAACGACCACAGGCGGGACTGGTTGTTCATTCCGATCGCGGCGCGCAATACTGCTCACGCGACTA
TCGCGATCTCACAAAGCAGTTCGGCATGACCATATCGATGAGCCGCAAGGGCGATTGCTACGACAACGCACCAATGGAAA
GTTTCTGGGGGTCGCTCAAAAACGAACTCGTGCATCACTGCCGGTTCGCGACACGCGCTGAGGCTCGACAGGCCGTCACA
GAATACATCGAGATATTTTACAACCGGCAGCGAAAGCAGGCCCGTCTTGGCTATCTGTCTCCTGCCGCCTTCACCCAACG
ATTTTACAAGATGCAACTCGCAGCCTAG

Upstream 100 bases:

>100_bases
TGGAGCGGGACGTTCTAAAAAAAGCGACGGTCTATTTCGCGAAGGAGTCGCGGTGAAATACGACCGGATCGAAGCAATGC
GACATGACTATCCGATCGCA

Downstream 100 bases:

>100_bases
GCCATTGCTCTCCACGATTGACGACCGACCTCAGATCGCCAGATAGACGGCCTTGGTCCGTACCGCCCCGCTGTCACGCA
CTTTGACGTGGATGCAGTCC

Product: putative IS1 transposase, InsB

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLCRVFEVGASSYYAWRRRAESPRAQENARLEVQIAAAHERTRHTYGRERLQADLRDHGVRVGLHRIRRIRSKLGLRCKQ
KRKFRNTTDSKHDLPVAPNLLERNFDMSAPNQTWVSDITYLWTDEGWLYLAGIKDLFNGELVGYAMSERMTRSLVMQALF
SAVSLKRPQAGLVVHSDRGAQYCSRDYRDLTKQFGMTISMSRKGDCYDNAPMESFWGSLKNELVHHCRFATRAEARQAVT
EYIEIFYNRQRKQARLGYLSPAAFTQRFYKMQLAA

Sequences:

>Translated_275_residues
MLCRVFEVGASSYYAWRRRAESPRAQENARLEVQIAAAHERTRHTYGRERLQADLRDHGVRVGLHRIRRIRSKLGLRCKQ
KRKFRNTTDSKHDLPVAPNLLERNFDMSAPNQTWVSDITYLWTDEGWLYLAGIKDLFNGELVGYAMSERMTRSLVMQALF
SAVSLKRPQAGLVVHSDRGAQYCSRDYRDLTKQFGMTISMSRKGDCYDNAPMESFWGSLKNELVHHCRFATRAEARQAVT
EYIEIFYNRQRKQARLGYLSPAAFTQRFYKMQLAA
>Mature_275_residues
MLCRVFEVGASSYYAWRRRAESPRAQENARLEVQIAAAHERTRHTYGRERLQADLRDHGVRVGLHRIRRIRSKLGLRCKQ
KRKFRNTTDSKHDLPVAPNLLERNFDMSAPNQTWVSDITYLWTDEGWLYLAGIKDLFNGELVGYAMSERMTRSLVMQALF
SAVSLKRPQAGLVVHSDRGAQYCSRDYRDLTKQFGMTISMSRKGDCYDNAPMESFWGSLKNELVHHCRFATRAEARQAVT
EYIEIFYNRQRKQARLGYLSPAAFTQRFYKMQLAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=250, Percent_Identity=30.8, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI1788405, Length=268, Percent_Identity=42.910447761194, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787263, Length=268, Percent_Identity=42.910447761194, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1786753, Length=268, Percent_Identity=42.910447761194, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1786570, Length=268, Percent_Identity=42.910447761194, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1786490, Length=268, Percent_Identity=42.910447761194, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789981, Length=272, Percent_Identity=33.4558823529412, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32044; Mature: 32044

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRVFEVGASSYYAWRRRAESPRAQENARLEVQIAAAHERTRHTYGRERLQADLRDHGV
CEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RVGLHRIRRIRSKLGLRCKQKRKFRNTTDSKHDLPVAPNLLERNFDMSAPNQTWVSDITY
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHEEE
LWTDEGWLYLAGIKDLFNGELVGYAMSERMTRSLVMQALFSAVSLKRPQAGLVVHSDRGA
EEECCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
QYCSRDYRDLTKQFGMTISMSRKGDCYDNAPMESFWGSLKNELVHHCRFATRAEARQAVT
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYIEIFYNRQRKQARLGYLSPAAFTQRFYKMQLAA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLCRVFEVGASSYYAWRRRAESPRAQENARLEVQIAAAHERTRHTYGRERLQADLRDHGV
CEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RVGLHRIRRIRSKLGLRCKQKRKFRNTTDSKHDLPVAPNLLERNFDMSAPNQTWVSDITY
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHEEE
LWTDEGWLYLAGIKDLFNGELVGYAMSERMTRSLVMQALFSAVSLKRPQAGLVVHSDRGA
EEECCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
QYCSRDYRDLTKQFGMTISMSRKGDCYDNAPMESFWGSLKNELVHHCRFATRAEARQAVT
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYIEIFYNRQRKQARLGYLSPAAFTQRFYKMQLAA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]