| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is groEL
Identifier: 91783218
GI number: 91783218
Start: 2060870
End: 2062492
Strand: Direct
Name: groEL
Synonym: Bxe_A2609
Alternate gene names: 91783218
Gene position: 2060870-2062492 (Clockwise)
Preceding gene: 91783217
Following gene: 91783219
Centisome position: 42.09
GC content: 62.05
Gene sequence:
>1623_bases ATGAGTGCGAAAGATGTCAAGTTCCACGACAGCGCCCGCAGCCGGATCGTCAAGGGCGTGAACGTGCTGGCCGATGCAGT GAAAGTGACGCTCGGCCCGAAGGGGCGAAATGTCCTGATTGAGCGCAGCTTCGGCGCGCCGACCATCACCAAGGACGGTG TGTCTGTCGCTAAGGAAATCGAGCTGAAGGACCGCTTCGAAAACATGGGCGCCCAGGTTGTCAAGCAGGTCGCATCGAAG ACCGCCGATGTCGCCGGCGACGGTACGACGACCGCCACGGTTCTCGCCCAGTCGATCGTGCAGGAAGGCATGAAGCACGT CGCTGCTGGCATGAATCCGATGGACCTGAAGCGCGGCATCGACAAGGCGGTGGCGGCTGTGCTCGATGAACTGCACAGGC TGTCCAAGCCGATAAAGACAAGCCGGGAAATCGCCCAGGTCGGCGCCATCTCGGCGAATGCGGACGAGGCGATCGGCAAG ATCATTGCAGACGCGATGGACAAGGTCGGCAAGGAAGGGGTGATTACGGTCGAAGACGGCAAGTCGCTCGAGAACGAACT GGAGGTCGTCGAAGGGATGCAGTTCGATCGGGGTTATCTGAGTCCATACTTCATCAATGACCCGGACAAACAGGTTGCGC ATCTCGACGATCCGCTGATCCTGCTGCATGACAAGAAAATTTCCAGTATCCGCGACCTGCTGCCGGTCCTCGAGGCTGCT GCCAAGGCAGGCAAGCCGCTCCTGATCATCGCCGAGGATGTCGAAGGCGAAGCGCTCACGACGCTGGTGGTCAATTCGAT GCGCGGTGTGCTGAAGGTGGCGGCGGTGAAGGCCCCGGGCTTTGGCGATCGCCGCAAGGCCCTGCTCGAGGACATTGCGA TTCTCACCGGTGCAACGGTCATTTCCGAAGAGACTGGCAAGCAGCTCGAGAAGGCAACGCTCGAAGAGCTGGGCCGCGCG AAGCGTGTTGAGGTGCAGAAGGAAAACACCATCATCATCGATGGTGCAGGTGACCAGACGCGCATCGACGCACGCGTCAA GGCGATCCGCGCGCAGATCGAAGAAGCGACGAGCGACTATGACCGTGAAAAACTGCAGGAGCGCGTGGCGAAGCTTGCCG GTGGCGTTGCGGTGATCAAGGTGGGTGCGGCGACCGAGGTCGAAATGAAGGAAAAGAAAGACCGTGTCGACGATGCGCTG CATGCGACCCGCGCCGCAGTCGAAGAGGGCATCGTGCCAGGCGGCGGCGTGGCGTTGCTGCGGGCGCGTTCGGCCATCTC GAGTCTCACGGGCGCCAACGCCGACCAGGACGCCGGCATCAGGATTGTGCTGCGTGCGCTTGAGGCGCCGCTGCGCGTGA TCGCAGCCAATGCGGGCGACGAGCCGTCGGTCGTCGTCGCGAAGGTGCTCAGCGGGAAAGGCAACTACGGCTACAACGCA GCCACGGGCGAGTACGGCGATCTCGTCGAGACAGGTGTGGTCGACCCGACGAAGGTGACGCGTACGGCGCTGCAGAACGC CGCTTCGATCGCCGGACTGATCCTGACCACGGACGCCACGGTAGCGGAAGCGCCAAAAGAAGAAAAAGCCGTGCCGGCAC CTGCACCGGAACTGGAATACTAG
Upstream 100 bases:
>100_bases ATGCGCGAGGAAGACGTCATGGGCGTCCTCGAGTCCGACGCAGGCGCCGCACGCAAGGCGGCCTGATTATCTCTTCAATG GCTTATACCGGAGCAACAAG
Downstream 100 bases:
>100_bases ACGTTGGCTGCCTTGTGCTGGACAGCCGGTCAGCGTGGCTGGGCCCGGCTCCATTTCCCCAGAGGCTTGGAGCCGTCATC GGTGGCTGTAGCGCTGTCCG
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein 2; Protein Cpn60 2
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEIELKDRFENMGAQVVKQVASK TADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGIDKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGK IIADAMDKVGKEGVITVEDGKSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAA AKAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATVISEETGKQLEKATLEELGRA KRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDAL HATRAAVEEGIVPGGGVALLRARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNA ATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY
Sequences:
>Translated_540_residues MSAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEIELKDRFENMGAQVVKQVASK TADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGIDKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGK IIADAMDKVGKEGVITVEDGKSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAA AKAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATVISEETGKQLEKATLEELGRA KRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDAL HATRAAVEEGIVPGGGVALLRARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNA ATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY >Mature_539_residues SAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEIELKDRFENMGAQVVKQVASKT ADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGIDKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGKI IADAMDKVGKEGVITVEDGKSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAAA KAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATVISEETGKQLEKATLEELGRAK RVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALH ATRAAVEEGIVPGGGVALLRARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNAA TGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family
Homologues:
Organism=Homo sapiens, GI41399285, Length=528, Percent_Identity=54.7348484848485, Blast_Score=561, Evalue=1e-160, Organism=Homo sapiens, GI31542947, Length=528, Percent_Identity=54.7348484848485, Blast_Score=561, Evalue=1e-160, Organism=Homo sapiens, GI5453607, Length=537, Percent_Identity=22.9050279329609, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1790586, Length=530, Percent_Identity=72.4528301886792, Blast_Score=773, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=529, Percent_Identity=53.4971644612476, Blast_Score=561, Evalue=1e-160, Organism=Caenorhabditis elegans, GI193210679, Length=211, Percent_Identity=54.0284360189574, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17564182, Length=566, Percent_Identity=22.0848056537102, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=53.6121673003802, Blast_Score=559, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6322524, Length=534, Percent_Identity=23.0337078651685, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=54.26944971537, Blast_Score=570, Evalue=1e-162, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=54.26944971537, Blast_Score=570, Evalue=1e-162, Organism=Drosophila melanogaster, GI45550936, Length=527, Percent_Identity=53.1309297912713, Blast_Score=560, Evalue=1e-159, Organism=Drosophila melanogaster, GI45550132, Length=527, Percent_Identity=53.1309297912713, Blast_Score=560, Evalue=1e-159, Organism=Drosophila melanogaster, GI45550935, Length=527, Percent_Identity=53.1309297912713, Blast_Score=560, Evalue=1e-159, Organism=Drosophila melanogaster, GI17864606, Length=530, Percent_Identity=44.7169811320755, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI24584129, Length=531, Percent_Identity=39.924670433145, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI19921262, Length=531, Percent_Identity=39.924670433145, Blast_Score=363, Evalue=1e-100,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): CH602_BURXL (Q13ZW7)
Other databases:
- EMBL: CP000270 - EMBL: CP000270 - RefSeq: YP_558394.1 - RefSeq: YP_558424.1 - ProteinModelPortal: Q13ZW7 - SMR: Q13ZW7 - GeneID: 4004527 - GeneID: 4005260 - GenomeReviews: CP000270_GR - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A2609 - KEGG: bxe:Bxe_A4544 - HOGENOM: HBG625289 - OMA: DVKFHDS - GO: GO:0005737 - HAMAP: MF_00600 - InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 - PANTHER: PTHR11353 - PRINTS: PR00298 - TIGRFAMs: TIGR02348
Pfam domain/function: PF00118 Cpn60_TCP1; SSF48592 GroEL-ATPase
EC number: NA
Molecular weight: Translated: 57019; Mature: 56888
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEI CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGKIIADAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC KSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAA CCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH AKAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH ISEETGKQLEKATLEELGRAKRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDY HHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHCCCCCCCCCC ATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEI CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAVLDELHRLSKPIKTSREIAQVGAISANADEAIGKIIADAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC KSLENELEVVEGMQFDRGYLSPYFINDPDKQVAHLDDPLILLHDKKISSIRDLLPVLEAA CCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH AKAGKPLLIIAEDVEGEALTTLVVNSMRGVLKVAAVKAPGFGDRRKALLEDIAILTGATV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH ISEETGKQLEKATLEELGRAKRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDY HHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGNYGYNA HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHCCCCCCCCCC ATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAPELEY CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA