| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783082
Identifier: 91783082
GI number: 91783082
Start: 1927763
End: 1928581
Strand: Direct
Name: 91783082
Synonym: Bxe_A2728
Alternate gene names: NA
Gene position: 1927763-1928581 (Clockwise)
Preceding gene: 91783081
Following gene: 91783083
Centisome position: 39.38
GC content: 65.2
Gene sequence:
>819_bases ATGCGCGCCTGGTATCTTGATCGCCCCCCGCCCGTCGGGACGCTGGATCTGAACCGCGCGACCGGCCTGGTCGCGGCGCT CGGCGCGGCTGAAACGAATGCGTTCGCGGCCGCGGTTCTGCGTCTGCTCGGCGATGTCGCGGCAATTTCTCAATGCACGG TATTCGCATACGAGGCGGGTCTGCGTCCGCGCACCGTCGCTGTGGCTGACTATCGCGGCGGGGCCTATTTGCGCGAGGTC GCCGACATCTACGCGCGACGTTTCTATGCGCTCGACGGCAACCAGCAGATCGTCGCTGAGGCCAGCCCGCGCAAGCCCGG CACCTCGCTCACGATGCACCAGCAGGCGATCGACGATATCAAGCATGAAGCCTACAGGGCGGCCTGCTACAGCGGCCCGA ACGTGTCGGACCGCATCGCGCTGCTGTCCCGGCAGTCGGAGGATGTCTGGCTGTCCGTGAATCTCTACCGTGACCGCCAA TACGGCGTGTTCCGACAGGATGAGATCGCGCGCCTCGAAACCCTCGCACCGCTCGTCGTCCATGCCGCTCAGCAGCACTA TGCGCTTTCGGGCCAGCGCCAGGCCAGTATTCCGCAACTGATGCTCGCTCGCCTGCTGCGGCACTGCCCGGCGTTGTCGA AGCGTGAGCTCGACGTGCTGCGCGGCGTGCTCGAGGGACACACTACGAACGAGATCGCCGAACTAATCGGCGTCAAGGCT TCGAGCGTTACGACCTACCAGAAACGCGCGTACCGTCGGCTCGGTATATCGAGTCAGCGCCAGCTGTTCGCGCTCTGCCT CAATTCGCTGCCGGCCTGA
Upstream 100 bases:
>100_bases AACGGGGTGGTGTGCCGTGGTCAGATCTTCGGGATACCAAATTGCCGTGCGGGCACCGGCGGCGCTAGAATGAGACGCAA ATTCATCATTCCATCTCCAA
Downstream 100 bases:
>100_bases GCGGCGGCTGCACATCATCTCGGGGTTTTCCCCGATCCCCGGTCCGGTTGTCCCCAAACATGGGACAAGCGTCCGTCCCG GGCGGCCAATACTCCATTCA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein; Transcriptional Regulator; Transcription Regulator Protein; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR; LuxR Family Regulatory
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRAWYLDRPPPVGTLDLNRATGLVAALGAAETNAFAAAVLRLLGDVAAISQCTVFAYEAGLRPRTVAVADYRGGAYLREV ADIYARRFYALDGNQQIVAEASPRKPGTSLTMHQQAIDDIKHEAYRAACYSGPNVSDRIALLSRQSEDVWLSVNLYRDRQ YGVFRQDEIARLETLAPLVVHAAQQHYALSGQRQASIPQLMLARLLRHCPALSKRELDVLRGVLEGHTTNEIAELIGVKA SSVTTYQKRAYRRLGISSQRQLFALCLNSLPA
Sequences:
>Translated_272_residues MRAWYLDRPPPVGTLDLNRATGLVAALGAAETNAFAAAVLRLLGDVAAISQCTVFAYEAGLRPRTVAVADYRGGAYLREV ADIYARRFYALDGNQQIVAEASPRKPGTSLTMHQQAIDDIKHEAYRAACYSGPNVSDRIALLSRQSEDVWLSVNLYRDRQ YGVFRQDEIARLETLAPLVVHAAQQHYALSGQRQASIPQLMLARLLRHCPALSKRELDVLRGVLEGHTTNEIAELIGVKA SSVTTYQKRAYRRLGISSQRQLFALCLNSLPA >Mature_272_residues MRAWYLDRPPPVGTLDLNRATGLVAALGAAETNAFAAAVLRLLGDVAAISQCTVFAYEAGLRPRTVAVADYRGGAYLREV ADIYARRFYALDGNQQIVAEASPRKPGTSLTMHQQAIDDIKHEAYRAACYSGPNVSDRIALLSRQSEDVWLSVNLYRDRQ YGVFRQDEIARLETLAPLVVHAAQQHYALSGQRQASIPQLMLARLLRHCPALSKRELDVLRGVLEGHTTNEIAELIGVKA SSVTTYQKRAYRRLGISSQRQLFALCLNSLPA
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30036; Mature: 30036
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAWYLDRPPPVGTLDLNRATGLVAALGAAETNAFAAAVLRLLGDVAAISQCTVFAYEAG CCCCCCCCCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCC LRPRTVAVADYRGGAYLREVADIYARRFYALDGNQQIVAEASPRKPGTSLTMHQQAIDDI CCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCHHHHHHHHHHH KHEAYRAACYSGPNVSDRIALLSRQSEDVWLSVNLYRDRQYGVFRQDEIARLETLAPLVV HHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH HAAQQHYALSGQRQASIPQLMLARLLRHCPALSKRELDVLRGVLEGHTTNEIAELIGVKA HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCC SSVTTYQKRAYRRLGISSQRQLFALCLNSLPA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRAWYLDRPPPVGTLDLNRATGLVAALGAAETNAFAAAVLRLLGDVAAISQCTVFAYEAG CCCCCCCCCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCC LRPRTVAVADYRGGAYLREVADIYARRFYALDGNQQIVAEASPRKPGTSLTMHQQAIDDI CCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCHHHHHHHHHHH KHEAYRAACYSGPNVSDRIALLSRQSEDVWLSVNLYRDRQYGVFRQDEIARLETLAPLVV HHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH HAAQQHYALSGQRQASIPQLMLARLLRHCPALSKRELDVLRGVLEGHTTNEIAELIGVKA HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCC SSVTTYQKRAYRRLGISSQRQLFALCLNSLPA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA