| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91783065
Identifier: 91783065
GI number: 91783065
Start: 1911913
End: 1912320
Strand: Direct
Name: 91783065
Synonym: Bxe_A2745
Alternate gene names: NA
Gene position: 1911913-1912320 (Clockwise)
Preceding gene: 91783064
Following gene: 91783066
Centisome position: 39.05
GC content: 57.11
Gene sequence:
>408_bases GTGAAGCACGTTACATATCCCCGATCCTCTCTCGACAGTGAGCCGTACTGGGAAGGTTGCCGTCGCAGAGAGTTGCGTTA CCAGCATTGCAGTGAGTGCGGCGAAGTCGTGTTTCATCCGCGGGCGCTGTGCCCGTATTGTCTGACGGATGCGCTCACAT GGAAGGTATCGGCGGGACGCGCACGGATCTATTCTTTTTCGGTGCAGCATGTCGCGTTGCGGCCGGTCGATGGCGAGGAC GCGCCCCGCGTGCTCGGTATCGCCGAAGTCGACGAAGGATTTCACATGTTCGCTGAATTCTTCACCGACGACCTCGATTC GCTGACGATCGGCGATCCTCTCGAAGTTCTGTTTGCGAAAATTGACGACTCGCTCGTACTTCCCAAGTTCAAGGTGTTGC CACGATGA
Upstream 100 bases:
>100_bases CTGACCACGACAGTGGGCGGACCGGTTGTGACCGGCTCCGCGGCCATAAATCTGCGCCAACGTGGCTCGTTGCTACGCAG CGCGTCACAGGAGACAACCG
Downstream 100 bases:
>100_bases GTACGAACGCATTACGCGGTAAGGCCGCGATCGTCGGTTTCGGCGACAGTTATTGCAAGCGTGGGGAAGTTAAAAGTGCG ATGCGACTGGCACAGGAAGC
Product: nucleic-acid-binding protein containing a Zn-ribbon
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKHVTYPRSSLDSEPYWEGCRRRELRYQHCSECGEVVFHPRALCPYCLTDALTWKVSAGRARIYSFSVQHVALRPVDGED APRVLGIAEVDEGFHMFAEFFTDDLDSLTIGDPLEVLFAKIDDSLVLPKFKVLPR
Sequences:
>Translated_135_residues MKHVTYPRSSLDSEPYWEGCRRRELRYQHCSECGEVVFHPRALCPYCLTDALTWKVSAGRARIYSFSVQHVALRPVDGED APRVLGIAEVDEGFHMFAEFFTDDLDSLTIGDPLEVLFAKIDDSLVLPKFKVLPR >Mature_135_residues MKHVTYPRSSLDSEPYWEGCRRRELRYQHCSECGEVVFHPRALCPYCLTDALTWKVSAGRARIYSFSVQHVALRPVDGED APRVLGIAEVDEGFHMFAEFFTDDLDSLTIGDPLEVLFAKIDDSLVLPKFKVLPR
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15449; Mature: 15449
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVTYPRSSLDSEPYWEGCRRRELRYQHCSECGEVVFHPRALCPYCLTDALTWKVSAGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHEEEECCCC ARIYSFSVQHVALRPVDGEDAPRVLGIAEVDEGFHMFAEFFTDDLDSLTIGDPLEVLFAK EEEEEEEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IDDSLVLPKFKVLPR CCCCEECCCCCCCCC >Mature Secondary Structure MKHVTYPRSSLDSEPYWEGCRRRELRYQHCSECGEVVFHPRALCPYCLTDALTWKVSAGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHEEEECCCC ARIYSFSVQHVALRPVDGEDAPRVLGIAEVDEGFHMFAEFFTDDLDSLTIGDPLEVLFAK EEEEEEEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IDDSLVLPKFKVLPR CCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA