| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is paaF [C]
Identifier: 91783061
GI number: 91783061
Start: 1906074
End: 1906862
Strand: Direct
Name: paaF [C]
Synonym: Bxe_A2749
Alternate gene names: 91783061
Gene position: 1906074-1906862 (Clockwise)
Preceding gene: 91783052
Following gene: 91783063
Centisome position: 38.93
GC content: 65.78
Gene sequence:
>789_bases ATGAGCGAGCCGTCCGTTGTCGCAGTGAGCCGCGCCGGCACCGTCGGCGTCATCGAGCTCGCACGCCCTGAAAAATTCAA TTGCCTGTCGCTTGCGGTGTTCGCGGCGATCAGCGCGGCTGTGGACGCGTTCGAGACGCCTGAGTCGGGCGTGCGCTCGA TCATGATCTGCGCTCAAGGCAAGAACTTCTGCACCGGCGCGGATCTGGACGAAGTGCTTTCGCTGCGCCAGGAGATCGGC GATATGCGCCGTTTTATCAGCACTGCGCACCAAACCATGAAGCGGCTGTCCACGAGCAGCCTGCCGGTTGTTGCGGCGTG CCAGGGTTTATCGCTAGCCGGCGGCTTCGAATTGATGCTGGCCTGCGACATTGCGATCGCCGCACGAGATGCGCGCTTCG GCGATCAGCACGCACAGTACGGCCTGCTGCCGGGCTTCGGCGCGAGCCAGCGGATTCCCCGTTTGATCGGGTTGCGCCGC AGCATGGATCTGTTCTTCTCGGCGCGCTGGCTCGATGCGCAGACCGCGCAGCAATGGGGTCTCGTGAATCGCGTCGTCGA AGCGGGCGAACTGAGGCAGGCGGCGCTCGACTACTGCGAGGAGCTGGCCACGCGCAGCCGCATCGGGCTTGCAACGATGA AGCGGCTGGCGCGCGAGGGACTGGAAGGGTCGCTGGAGGCGGGACTGAAGCTGGAGGAGGCGGTCGTGCCGGGCGGCCTG CTGGAAGACGACGTGAGCGAAGGACTGGCGGCGTTCCAGGAGCGACGCTCGCCCCGGTTCCGCTCATAG
Upstream 100 bases:
>100_bases AGTCAGTCCAATTGACACGTGGTATTCATGCGGCTATCGTGGGCGGCGAATCCGGGAGGATTGGCGGCCCGGAAAGTGTC GGACAGAGGGAGAACCCAGC
Downstream 100 bases:
>100_bases GTTGCGGGCCGCACCCGCGCGGCCTTTCCGATCAGACTGCCGAGATACCGCCCGTGATGCTGATCGCCTGACCGGTGATC TTGGCGGCGGCCGGCGACGC
Product: short chain enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSEPSVVAVSRAGTVGVIELARPEKFNCLSLAVFAAISAAVDAFETPESGVRSIMICAQGKNFCTGADLDEVLSLRQEIG DMRRFISTAHQTMKRLSTSSLPVVAACQGLSLAGGFELMLACDIAIAARDARFGDQHAQYGLLPGFGASQRIPRLIGLRR SMDLFFSARWLDAQTAQQWGLVNRVVEAGELRQAALDYCEELATRSRIGLATMKRLAREGLEGSLEAGLKLEEAVVPGGL LEDDVSEGLAAFQERRSPRFRS
Sequences:
>Translated_262_residues MSEPSVVAVSRAGTVGVIELARPEKFNCLSLAVFAAISAAVDAFETPESGVRSIMICAQGKNFCTGADLDEVLSLRQEIG DMRRFISTAHQTMKRLSTSSLPVVAACQGLSLAGGFELMLACDIAIAARDARFGDQHAQYGLLPGFGASQRIPRLIGLRR SMDLFFSARWLDAQTAQQWGLVNRVVEAGELRQAALDYCEELATRSRIGLATMKRLAREGLEGSLEAGLKLEEAVVPGGL LEDDVSEGLAAFQERRSPRFRS >Mature_261_residues SEPSVVAVSRAGTVGVIELARPEKFNCLSLAVFAAISAAVDAFETPESGVRSIMICAQGKNFCTGADLDEVLSLRQEIGD MRRFISTAHQTMKRLSTSSLPVVAACQGLSLAGGFELMLACDIAIAARDARFGDQHAQYGLLPGFGASQRIPRLIGLRRS MDLFFSARWLDAQTAQQWGLVNRVVEAGELRQAALDYCEELATRSRIGLATMKRLAREGLEGSLEAGLKLEEAVVPGGLL EDDVSEGLAAFQERRSPRFRS
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=251, Percent_Identity=30.6772908366534, Blast_Score=127, Evalue=8e-30, Organism=Homo sapiens, GI4502327, Length=251, Percent_Identity=35.4581673306773, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI31542718, Length=260, Percent_Identity=27.3076923076923, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI20127408, Length=210, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI68989263, Length=144, Percent_Identity=32.6388888888889, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI70995211, Length=210, Percent_Identity=30.4761904761905, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI213417737, Length=176, Percent_Identity=25.5681818181818, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI157694516, Length=176, Percent_Identity=25.5681818181818, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI150378541, Length=137, Percent_Identity=32.1167883211679, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=31.2741312741313, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787660, Length=248, Percent_Identity=29.0322580645161, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788597, Length=252, Percent_Identity=28.968253968254, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI221142681, Length=257, Percent_Identity=27.2373540856031, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790281, Length=185, Percent_Identity=31.3513513513514, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788682, Length=202, Percent_Identity=31.1881188118812, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082183, Length=258, Percent_Identity=25.1937984496124, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25145438, Length=260, Percent_Identity=31.9230769230769, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17554946, Length=264, Percent_Identity=29.1666666666667, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540714, Length=220, Percent_Identity=28.6363636363636, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560910, Length=215, Percent_Identity=30.2325581395349, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17534483, Length=271, Percent_Identity=27.3062730627306, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17540306, Length=249, Percent_Identity=30.5220883534137, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17536985, Length=255, Percent_Identity=26.6666666666667, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25144276, Length=255, Percent_Identity=30.1960784313725, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17508951, Length=255, Percent_Identity=30.1960784313725, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17508953, Length=255, Percent_Identity=30.1960784313725, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17558304, Length=215, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535521, Length=220, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI20129971, Length=249, Percent_Identity=29.3172690763052, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI24653477, Length=249, Percent_Identity=29.3172690763052, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=30.5555555555556, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI19920382, Length=224, Percent_Identity=28.125, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI21357171, Length=204, Percent_Identity=27.4509803921569, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24654903, Length=233, Percent_Identity=25.7510729613734, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28281; Mature: 28150
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPSVVAVSRAGTVGVIELARPEKFNCLSLAVFAAISAAVDAFETPESGVRSIMICAQG CCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECC KNFCTGADLDEVLSLRQEIGDMRRFISTAHQTMKRLSTSSLPVVAACQGLSLAGGFELML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHH ACDIAIAARDARFGDQHAQYGLLPGFGASQRIPRLIGLRRSMDLFFSARWLDAQTAQQWG HHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LVNRVVEAGELRQAALDYCEELATRSRIGLATMKRLAREGLEGSLEAGLKLEEAVVPGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCC LEDDVSEGLAAFQERRSPRFRS HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEPSVVAVSRAGTVGVIELARPEKFNCLSLAVFAAISAAVDAFETPESGVRSIMICAQG CCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECC KNFCTGADLDEVLSLRQEIGDMRRFISTAHQTMKRLSTSSLPVVAACQGLSLAGGFELML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHH ACDIAIAARDARFGDQHAQYGLLPGFGASQRIPRLIGLRRSMDLFFSARWLDAQTAQQWG HHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LVNRVVEAGELRQAALDYCEELATRSRIGLATMKRLAREGLEGSLEAGLKLEEAVVPGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCC LEDDVSEGLAAFQERRSPRFRS HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA