| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yngE [H]
Identifier: 91783049
GI number: 91783049
Start: 1892675
End: 1894273
Strand: Direct
Name: yngE [H]
Synonym: Bxe_A2761
Alternate gene names: 91783049
Gene position: 1892675-1894273 (Clockwise)
Preceding gene: 91783048
Following gene: 91783050
Centisome position: 38.66
GC content: 64.79
Gene sequence:
>1599_bases GTGAGTACCATCCTCTCCCGCATCGATCGCCAGTCCGACGCGTTCAGGAACAACGAAGCGCACTACGACGCGCTGCTCGC CGAACTGCGCGAACGCCACGCGCATGTGCTGGCGGGTGGCGGCGAGCGGCTGGTCGAACGGCATCATGCGCGCAACAAGA TGCTCGCGCGTGAACGGATCGACCTGCTGCTCGACCCGCTGTCGCCGTTTCTCGAACTGTCGCCGCTCGCGGCCTGGGGC ATGTACGGCAACGCGGTGCCGTCAGCCGGCGTGATTACCGGTATCGGCCTGATCGCGGGCACGCCCTGCATGCTGATCGC CAATGACGCCACCGTGAAGGGCGGTTCGTTCTTCGCCGAGACCGTCAAGAAACACGTGCGCGCGCAGGACATTGCCGGGC ATCACCGTTTGCCGGTCATTTATCTGGTCGATTGCGGCGGTGCGTATCTGCCGGAACAGGATCGTGTGTTCCCCGACAAG GACCACTTCGGCAATACGTTCTACCGGCAATGCCAGATGTCCGCCGCGGGCATTCCGCAGATCGCCGCCGTGTTCGGCGG CTGCACGGCGGGTGGCGCATACATACCCGCGCTCGCCGACGAAGTCGTGATGGTACGCGGCCAGGCACGCATTCATCTGG GCGGCCCGCAGATCGTCAAGGCGGCGATCAACGAAATCGTCGACGGCGAGACGCTCGGCGGCGCCGAGATGCACACGCGC GTGTCCGGCGTCTCCGACTATCTGGCGGAAAACGAAGCACAGGCGCTCCAGCGCGTGCGCGACATCATCGCCAATCTGAA CCGGCCACGGCCGCTTTCCGGCGCGGTGCGCGAAGTCGTGCCGCCGCGCTATGACATCGGCGAGTTGCGCGGCATCCTGC CGCCGGGGCTGAAGGAATCGTATGACGTGCGCGAAGTGATCGCGCGGCTCGTCGACGATTCCGGGTTCCAGGAATTCAAG CCCGAGTTCGGCAGCACGCTCGTGTGCGGCACTGCATACTGGTGCGGTTATCCGGTTGGAATTCTCGCCAACAATGGCGT GCTGTTTTCAGAGTCGGCCACGAAGGGTGCGCATTTCATCGAACTGTGCAACCAGCGCAATATTCCACTGCTGTTTCTGC AGAACATCACTGGCTTCATGGTGGGTACGGAGGCCGAGCGCGGCGGCATTGCAAGGCACAGCGCGAAGCTCGTCTACGCA ATGGCGACTGCGCGCGTGCCGCGCCTCACGGTGATCATCGGCGGCTCGTTCGGCGCGGGCAACTACGGTATGTGCGGTCG CGGTTTCGATCCGCGCTTCCTGTTCGCGTGGCCGAACTCGCGAATCGCGACCATGAGCGCGGACGTGGCGGCGACCGTGC TGACCGACTTGCGGCGCAGCAGTCTGAAAGCCGCCGCCGATGAAGCCGAGATCGCCGAAATCGATCGCGTCACGCGCGAG CAGTTCACCACGCAAAGCGATCCGTATTACGCCACCGCGCGCCTGTGGGACGACGGGCTGATCGAGCCTTCGGAAACGCG CGAAGTGATCGGCCTGTGCCTCGCACTCGCGGCGGCCGAAGCGCCGGCGACGGGTCCTTCACCCGTCTTCCGGATGTAA
Upstream 100 bases:
>100_bases CGGCAGCGGCGAAACTGCAGCCGGGTACGCGCGTGCGTGTCGAGTTCATCGATGCGCCGCAAGGCCGCATTACCGATTTC CACTACGTGCTGGCCGCCGC
Downstream 100 bases:
>100_bases AGGCAAACATGTTCGAATCCATTCTTATCGCGAACCGTGGCGAAATCGCCTGCCGGATCGCACGCACCAGCCGCCGGCTG GGCATTCGCGTCATCGCTGT
Product: propionyl-CoA carboxylase
Products: ADP; phosphate; (S)-methylmalonyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MSTILSRIDRQSDAFRNNEAHYDALLAELRERHAHVLAGGGERLVERHHARNKMLARERIDLLLDPLSPFLELSPLAAWG MYGNAVPSAGVITGIGLIAGTPCMLIANDATVKGGSFFAETVKKHVRAQDIAGHHRLPVIYLVDCGGAYLPEQDRVFPDK DHFGNTFYRQCQMSAAGIPQIAAVFGGCTAGGAYIPALADEVVMVRGQARIHLGGPQIVKAAINEIVDGETLGGAEMHTR VSGVSDYLAENEAQALQRVRDIIANLNRPRPLSGAVREVVPPRYDIGELRGILPPGLKESYDVREVIARLVDDSGFQEFK PEFGSTLVCGTAYWCGYPVGILANNGVLFSESATKGAHFIELCNQRNIPLLFLQNITGFMVGTEAERGGIARHSAKLVYA MATARVPRLTVIIGGSFGAGNYGMCGRGFDPRFLFAWPNSRIATMSADVAATVLTDLRRSSLKAAADEAEIAEIDRVTRE QFTTQSDPYYATARLWDDGLIEPSETREVIGLCLALAAAEAPATGPSPVFRM
Sequences:
>Translated_532_residues MSTILSRIDRQSDAFRNNEAHYDALLAELRERHAHVLAGGGERLVERHHARNKMLARERIDLLLDPLSPFLELSPLAAWG MYGNAVPSAGVITGIGLIAGTPCMLIANDATVKGGSFFAETVKKHVRAQDIAGHHRLPVIYLVDCGGAYLPEQDRVFPDK DHFGNTFYRQCQMSAAGIPQIAAVFGGCTAGGAYIPALADEVVMVRGQARIHLGGPQIVKAAINEIVDGETLGGAEMHTR VSGVSDYLAENEAQALQRVRDIIANLNRPRPLSGAVREVVPPRYDIGELRGILPPGLKESYDVREVIARLVDDSGFQEFK PEFGSTLVCGTAYWCGYPVGILANNGVLFSESATKGAHFIELCNQRNIPLLFLQNITGFMVGTEAERGGIARHSAKLVYA MATARVPRLTVIIGGSFGAGNYGMCGRGFDPRFLFAWPNSRIATMSADVAATVLTDLRRSSLKAAADEAEIAEIDRVTRE QFTTQSDPYYATARLWDDGLIEPSETREVIGLCLALAAAEAPATGPSPVFRM >Mature_531_residues STILSRIDRQSDAFRNNEAHYDALLAELRERHAHVLAGGGERLVERHHARNKMLARERIDLLLDPLSPFLELSPLAAWGM YGNAVPSAGVITGIGLIAGTPCMLIANDATVKGGSFFAETVKKHVRAQDIAGHHRLPVIYLVDCGGAYLPEQDRVFPDKD HFGNTFYRQCQMSAAGIPQIAAVFGGCTAGGAYIPALADEVVMVRGQARIHLGGPQIVKAAINEIVDGETLGGAEMHTRV SGVSDYLAENEAQALQRVRDIIANLNRPRPLSGAVREVVPPRYDIGELRGILPPGLKESYDVREVIARLVDDSGFQEFKP EFGSTLVCGTAYWCGYPVGILANNGVLFSESATKGAHFIELCNQRNIPLLFLQNITGFMVGTEAERGGIARHSAKLVYAM ATARVPRLTVIIGGSFGAGNYGMCGRGFDPRFLFAWPNSRIATMSADVAATVLTDLRRSSLKAAADEAEIAEIDRVTREQ FTTQSDPYYATARLWDDGLIEPSETREVIGLCLALAAAEAPATGPSPVFRM
Specific function: Unknown
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI11545863, Length=540, Percent_Identity=53.5185185185185, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI119943100, Length=505, Percent_Identity=34.2574257425743, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI295821216, Length=525, Percent_Identity=33.1428571428571, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI310133460, Length=143, Percent_Identity=49.6503496503497, Blast_Score=124, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17552936, Length=533, Percent_Identity=51.5947467166979, Blast_Score=551, Evalue=1e-157, Organism=Caenorhabditis elegans, GI25147359, Length=503, Percent_Identity=34.7912524850895, Blast_Score=257, Evalue=9e-69, Organism=Caenorhabditis elegans, GI25147362, Length=503, Percent_Identity=34.7912524850895, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24586065, Length=550, Percent_Identity=53.6363636363636, Blast_Score=577, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: 6.4.1.3
Molecular weight: Translated: 57546; Mature: 57415
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILSRIDRQSDAFRNNEAHYDALLAELRERHAHVLAGGGERLVERHHARNKMLARERI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH DLLLDPLSPFLELSPLAAWGMYGNAVPSAGVITGIGLIAGTPCMLIANDATVKGGSFFAE HHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCCHHHHH TVKKHVRAQDIAGHHRLPVIYLVDCGGAYLPEQDRVFPDKDHFGNTFYRQCQMSAAGIPQ HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH IAAVFGGCTAGGAYIPALADEVVMVRGQARIHLGGPQIVKAAINEIVDGETLGGAEMHTR HHHHHCCCCCCCCCHHHHHCCEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHH VSGVSDYLAENEAQALQRVRDIIANLNRPRPLSGAVREVVPPRYDIGELRGILPPGLKES HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCC YDVREVIARLVDDSGFQEFKPEFGSTLVCGTAYWCGYPVGILANNGVLFSESATKGAHFI CCHHHHHHHHHCCCCCHHHCHHHCCEEEECCHHHHCCCEEEEECCCEEEECCCCCCHHHH ELCNQRNIPLLFLQNITGFMVGTEAERGGIARHSAKLVYAMATARVPRLTVIIGGSFGAG HHHCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NYGMCGRGFDPRFLFAWPNSRIATMSADVAATVLTDLRRSSLKAAADEAEIAEIDRVTRE CCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QFTTQSDPYYATARLWDDGLIEPSETREVIGLCLALAAAEAPATGPSPVFRM HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STILSRIDRQSDAFRNNEAHYDALLAELRERHAHVLAGGGERLVERHHARNKMLARERI CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH DLLLDPLSPFLELSPLAAWGMYGNAVPSAGVITGIGLIAGTPCMLIANDATVKGGSFFAE HHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCCHHHHH TVKKHVRAQDIAGHHRLPVIYLVDCGGAYLPEQDRVFPDKDHFGNTFYRQCQMSAAGIPQ HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH IAAVFGGCTAGGAYIPALADEVVMVRGQARIHLGGPQIVKAAINEIVDGETLGGAEMHTR HHHHHCCCCCCCCCHHHHHCCEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHH VSGVSDYLAENEAQALQRVRDIIANLNRPRPLSGAVREVVPPRYDIGELRGILPPGLKES HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCC YDVREVIARLVDDSGFQEFKPEFGSTLVCGTAYWCGYPVGILANNGVLFSESATKGAHFI CCHHHHHHHHHCCCCCHHHCHHHCCEEEECCHHHHCCCEEEEECCCEEEECCCCCCHHHH ELCNQRNIPLLFLQNITGFMVGTEAERGGIARHSAKLVYAMATARVPRLTVIIGGSFGAG HHHCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NYGMCGRGFDPRFLFAWPNSRIATMSADVAATVLTDLRRSSLKAAADEAEIAEIDRVTRE CCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QFTTQSDPYYATARLWDDGLIEPSETREVIGLCLALAAAEAPATGPSPVFRM HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; propanoyl-CoA; HCO3-
Specific reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9387222 [H]