| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783047
Identifier: 91783047
GI number: 91783047
Start: 1890986
End: 1892188
Strand: Direct
Name: 91783047
Synonym: Bxe_A2763
Alternate gene names: NA
Gene position: 1890986-1892188 (Clockwise)
Preceding gene: 91783046
Following gene: 91783048
Centisome position: 38.62
GC content: 65.59
Gene sequence:
>1203_bases ATGAAGGCGCACAACGTAGCGGTTATCGGCGTTGGCCAGACGGAATTCCGGTCGCGCTCGGACAATCAGACTTACGCCGA ACTCGCGCAGGAGGCCGTCGCGCTCGCGCTTGTCGACGCCAATCTGCAACCCGAGGAAATCGACGCGGTGGTGTTTTCAA TGGCGCCGACCACCTTCATGGGCGTCGCGGACGCGGACAAATGGGCGGTCGATTACACCTGGGCGCGCGGCAAGCCGTTC ATGCGCGTGCACACCGGCGGCGCGACCGGCGGCTCCGCGTTGCAGGCGGCGCACGCGCACGTCGCGTCCGGGCAGTACGG CACCGTGCTGGTGGTCGGCGCCGACCGCATCACCGAAACGCCGGACGCGCAGTTCGTGCTGAACCTGATCTGGGACGCGT TCTACGAGCAGGACTTTGCGCTGAACACGGTGACCATGACAGCGCTCGCCACGCAGCGCTACATGCACAAGTACGGCACG ACCGAGCGGCAATATGCGAATGTCGTGGTACGTGCCCGCCGCAATGCGTTGAACAATCCTTCCGCGCATCTGAAGGGCGC GATCGATATCGACGCGGTACTCGCGTCGCCGCGCATTTCGTGGCCGTACAAGCTGTTCGATATCTGTCCGCGGTCGGCGG GTGCGGCGGCGGTGGTGATGACGTCCGAGACGCTCGCGCGCGAACGCTGCACGCGCCCGGCGTTCATCACCGGCACCGCG GGCGTGTCGAACACGATATTCATGGGCGATCGCATGGGACCTCACGCCGACACCGACTTCGCCGATTTCGCGGAGTTGCG CCAGGCGGCGCGCGAATGTTTCCGGCAGGCGGGCATTACGGATCCGCTGCGCGAGTTGCAAACGGTCGAAATCTACGACC CATTCAGCTCGTTCCAGTTTCCGCAGCTCGAATCGCTCGGCTTCTGCAAACCCGGCACGGCGCAGCAACTGAGCGACGAA GGCGCATTCGACATGGATGGCGCGATCGCCGTGAATCCGTCCGGCGGCACGCTGTGCACGAATCCGATCGGCGTGACCGG TCTCGTGCGCGCGGCGGAAGCGGCGCGTCAGGTCATGGGCCGCTCCGCCGCGATGCAGGTCAAGAACGTTCACAACGCGC TCGCCACCGCGATTGGTGGGTCGACGCAATTTTTCACGGTCACGATGCTGAGCGACGAGCCGCGCCGTGCCCCGGCGGCC TGA
Upstream 100 bases:
>100_bases GCGGCCATCAGGTCGACGGCGCGCGGCGCGCGCTCGCTCACGGCGTATCCGGCTTTGCACAACAGACTCATGGCTTTGTC GTCATGGAAGGAATAGCGGC
Downstream 100 bases:
>100_bases CAGGAGATCATTCATGAGCAAGAGCCCAGCAACACCCGAGCCGCGCACATTTCCGGGTGAATGGCATGTGCGCTACAACT ATCCGGTAGGCGACGTGGGC
Product: putative SCP-x_thiolase/acetyl- CoA acetyltransferase, PaaJ-like
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKAHNVAVIGVGQTEFRSRSDNQTYAELAQEAVALALVDANLQPEEIDAVVFSMAPTTFMGVADADKWAVDYTWARGKPF MRVHTGGATGGSALQAAHAHVASGQYGTVLVVGADRITETPDAQFVLNLIWDAFYEQDFALNTVTMTALATQRYMHKYGT TERQYANVVVRARRNALNNPSAHLKGAIDIDAVLASPRISWPYKLFDICPRSAGAAAVVMTSETLARERCTRPAFITGTA GVSNTIFMGDRMGPHADTDFADFAELRQAARECFRQAGITDPLRELQTVEIYDPFSSFQFPQLESLGFCKPGTAQQLSDE GAFDMDGAIAVNPSGGTLCTNPIGVTGLVRAAEAARQVMGRSAAMQVKNVHNALATAIGGSTQFFTVTMLSDEPRRAPAA
Sequences:
>Translated_400_residues MKAHNVAVIGVGQTEFRSRSDNQTYAELAQEAVALALVDANLQPEEIDAVVFSMAPTTFMGVADADKWAVDYTWARGKPF MRVHTGGATGGSALQAAHAHVASGQYGTVLVVGADRITETPDAQFVLNLIWDAFYEQDFALNTVTMTALATQRYMHKYGT TERQYANVVVRARRNALNNPSAHLKGAIDIDAVLASPRISWPYKLFDICPRSAGAAAVVMTSETLARERCTRPAFITGTA GVSNTIFMGDRMGPHADTDFADFAELRQAARECFRQAGITDPLRELQTVEIYDPFSSFQFPQLESLGFCKPGTAQQLSDE GAFDMDGAIAVNPSGGTLCTNPIGVTGLVRAAEAARQVMGRSAAMQVKNVHNALATAIGGSTQFFTVTMLSDEPRRAPAA >Mature_400_residues MKAHNVAVIGVGQTEFRSRSDNQTYAELAQEAVALALVDANLQPEEIDAVVFSMAPTTFMGVADADKWAVDYTWARGKPF MRVHTGGATGGSALQAAHAHVASGQYGTVLVVGADRITETPDAQFVLNLIWDAFYEQDFALNTVTMTALATQRYMHKYGT TERQYANVVVRARRNALNNPSAHLKGAIDIDAVLASPRISWPYKLFDICPRSAGAAAVVMTSETLARERCTRPAFITGTA GVSNTIFMGDRMGPHADTDFADFAELRQAARECFRQAGITDPLRELQTVEIYDPFSSFQFPQLESLGFCKPGTAQQLSDE GAFDMDGAIAVNPSGGTLCTNPIGVTGLVRAAEAARQVMGRSAAMQVKNVHNALATAIGGSTQFFTVTMLSDEPRRAPAA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=387, Percent_Identity=25.5813953488372, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI302344760, Length=387, Percent_Identity=24.2894056847545, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI302344767, Length=313, Percent_Identity=25.5591054313099, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI302344762, Length=379, Percent_Identity=24.5382585751979, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI55956775, Length=347, Percent_Identity=23.9193083573487, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537653, Length=384, Percent_Identity=23.4375, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI19921506, Length=397, Percent_Identity=27.2040302267003, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24585051, Length=398, Percent_Identity=26.1306532663317, Blast_Score=125, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 43012; Mature: 43012
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHNVAVIGVGQTEFRSRSDNQTYAELAQEAVALALVDANLQPEEIDAVVFSMAPTTFM CCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHEEEEEECCCCEE GVADADKWAVDYTWARGKPFMRVHTGGATGGSALQAAHAHVASGQYGTVLVVGADRITET ECCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC PDAQFVLNLIWDAFYEQDFALNTVTMTALATQRYMHKYGTTERQYANVVVRARRNALNNP CCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC SAHLKGAIDIDAVLASPRISWPYKLFDICPRSAGAAAVVMTSETLARERCTRPAFITGTA CHHCCCCEEEEHEECCCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCEEEEECC GVSNTIFMGDRMGPHADTDFADFAELRQAARECFRQAGITDPLRELQTVEIYDPFSSFQF CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCC PQLESLGFCKPGTAQQLSDEGAFDMDGAIAVNPSGGTLCTNPIGVTGLVRAAEAARQVMG CCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHC RSAAMQVKNVHNALATAIGGSTQFFTVTMLSDEPRRAPAA CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MKAHNVAVIGVGQTEFRSRSDNQTYAELAQEAVALALVDANLQPEEIDAVVFSMAPTTFM CCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHEEEEEECCCCEE GVADADKWAVDYTWARGKPFMRVHTGGATGGSALQAAHAHVASGQYGTVLVVGADRITET ECCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC PDAQFVLNLIWDAFYEQDFALNTVTMTALATQRYMHKYGTTERQYANVVVRARRNALNNP CCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC SAHLKGAIDIDAVLASPRISWPYKLFDICPRSAGAAAVVMTSETLARERCTRPAFITGTA CHHCCCCEEEEHEECCCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCEEEEECC GVSNTIFMGDRMGPHADTDFADFAELRQAARECFRQAGITDPLRELQTVEIYDPFSSFQF CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCC PQLESLGFCKPGTAQQLSDEGAFDMDGAIAVNPSGGTLCTNPIGVTGLVRAAEAARQVMG CCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHC RSAAMQVKNVHNALATAIGGSTQFFTVTMLSDEPRRAPAA CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]