| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783010
Identifier: 91783010
GI number: 91783010
Start: 1850607
End: 1851557
Strand: Direct
Name: 91783010
Synonym: Bxe_A2799
Alternate gene names: NA
Gene position: 1850607-1851557 (Clockwise)
Preceding gene: 91783009
Following gene: 91783011
Centisome position: 37.8
GC content: 69.72
Gene sequence:
>951_bases ATGCCGAACCTGACCAGGATTTTTGCCGGCGTGCTGATCGCGGTGGCGCTCGTGCTCGGCCTGTTCGCGTGGACGCTGTC GCGCCGCCCGGCGCCGGTGGCCGTCACGCCCGCCGTGCACGCGAGCTTTCCGGTGGTGGTGGCGACCCGCGCGCTGGCGC CGGGCAAACCCATTACCGTCGACGATTTGCGCATCCAGTCGCTGCCCATCAATCCGAACGGCGCCTTCACGGAGCCGGCG CAACTGGCCGGCCGTGTGCCGAACGCGGAGATCGGCGCGGATTCGCCGGTGCTGGAAAGCCAGTTGTCGTCGGGGCTTGC CGAGCGTGTCGAGGTCGGCGAGCGCGCGCTCGCCGTGCGGGTGGACGAGGGCAATGCGGTCGGCAACCGGTTGCGGCCGG GCAATTTCGTCGACGTATTTTTCACGCTCAAGCGCGACGGCGGCAGCATGGGTAACGGCGGCGAAATCGACCGGACCCAG GCGCGCTTGCTGATGTCGAAAGTGCGCGTGCTTGCATTCGGCAACGCCACCGCGAGCGGCGACAGCGCGGGCGACCCGAA CGGCATGGTTCGCACGGCGGTGCTCGCGGTGCCGGTTGCCGATGTCGATCGTCTGACGCTGGCCGAGAGCGCCGGCCGTC TGATCTTCGCGCTGCGCAATCCGAAGGATACCGAAGTAGTCGATCAAAGCGTGTTGCCGGCCTATCCGGGCGTGCTGAAG ACGGCGGCTCATGCGGGCGCGGCGGAGCCGCTCCAGGATTCCACGCGCGCCGCAGCCGGCGTCGCGCTCGACACGTTGTC GGGCAGCGCCAACGCGGGCGGCGCCGGCGCTGCCGCGAGGCTGCCGCCGCTGCCGCGCATGCCGCCGACGCGCGTGGCGG GCAATACCAACAGTACAAAGAGCGGTATCGAAGTGATACGGGGTGGGCGCGCCGAGACGGTCGCCTGGTAA
Upstream 100 bases:
>100_bases ATTCAGTGATGCGCGCGCCGGTTCCAGGCTTCGTGGTCCGTGAACGCGTGATTGCGCGCGCGCACGGCTTTGCATCGTTT AACCGGGGCCGCCATTCGCC
Downstream 100 bases:
>100_bases AGCAGTTTCAGGGAGCGGGCGGCCGGTCGCGTCCATAACTACATGACAGAACGGATTTTTGTTTTCCGCAAGGCGGCGTG GCTCGGGGTGGCCTTGCTGG
Product: putative signal peptide protein, CpaB like
Products: NA
Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Flp Pilus Assembly Protein; CpaB Family Flp Pilus Assembly Protein; Pilus Assembly Protein; Flp Pilus Assembly; Pilus Assembly Protein Cpab; Flp Type Pilus Assembly Protein; Signal Peptide Protein CpaB Like Protein; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Signal Peptide Protein; Signal Peptide Protein CpaB Like; Flp Pilus Assembly Protein CpaB-Like Protein; Transmembrane Fimbriae Assembly Protein
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPNLTRIFAGVLIAVALVLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPINPNGAFTEPA QLAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDGGSMGNGGEIDRTQ ARLLMSKVRVLAFGNATASGDSAGDPNGMVRTAVLAVPVADVDRLTLAESAGRLIFALRNPKDTEVVDQSVLPAYPGVLK TAAHAGAAEPLQDSTRAAAGVALDTLSGSANAGGAGAAARLPPLPRMPPTRVAGNTNSTKSGIEVIRGGRAETVAW
Sequences:
>Translated_316_residues MPNLTRIFAGVLIAVALVLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPINPNGAFTEPA QLAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDGGSMGNGGEIDRTQ ARLLMSKVRVLAFGNATASGDSAGDPNGMVRTAVLAVPVADVDRLTLAESAGRLIFALRNPKDTEVVDQSVLPAYPGVLK TAAHAGAAEPLQDSTRAAAGVALDTLSGSANAGGAGAAARLPPLPRMPPTRVAGNTNSTKSGIEVIRGGRAETVAW >Mature_315_residues PNLTRIFAGVLIAVALVLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPINPNGAFTEPAQ LAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGNFVDVFFTLKRDGGSMGNGGEIDRTQA RLLMSKVRVLAFGNATASGDSAGDPNGMVRTAVLAVPVADVDRLTLAESAGRLIFALRNPKDTEVVDQSVLPAYPGVLKT AAHAGAAEPLQDSTRAAAGVALDTLSGSANAGGAGAAARLPPLPRMPPTRVAGNTNSTKSGIEVIRGGRAETVAW
Specific function: Unknown
COG id: COG3745
COG function: function code U; Flp pilus assembly protein CpaB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32462; Mature: 32331
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLTRIFAGVLIAVALVLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCHHEEEHHCCCCCCEEE DDLRIQSLPINPNGAFTEPAQLAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVR CCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE VDEGNAVGNRLRPGNFVDVFFTLKRDGGSMGNGGEIDRTQARLLMSKVRVLAFGNATASG ECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC DSAGDPNGMVRTAVLAVPVADVDRLTLAESAGRLIFALRNPKDTEVVDQSVLPAYPGVLK CCCCCCCCCEEEHEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHH TAAHAGAAEPLQDSTRAAAGVALDTLSGSANAGGAGAAARLPPLPRMPPTRVAGNTNSTK HHHHCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SGIEVIRGGRAETVAW HHHHHHCCCCCCCCCC >Mature Secondary Structure PNLTRIFAGVLIAVALVLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCHHEEEHHCCCCCCEEE DDLRIQSLPINPNGAFTEPAQLAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVR CCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE VDEGNAVGNRLRPGNFVDVFFTLKRDGGSMGNGGEIDRTQARLLMSKVRVLAFGNATASG ECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC DSAGDPNGMVRTAVLAVPVADVDRLTLAESAGRLIFALRNPKDTEVVDQSVLPAYPGVLK CCCCCCCCCEEEHEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHH TAAHAGAAEPLQDSTRAAAGVALDTLSGSANAGGAGAAARLPPLPRMPPTRVAGNTNSTK HHHHCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SGIEVIRGGRAETVAW HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA