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The map label for this gene is ybiO [H]

Identifier: 91782958

GI number: 91782958

Start: 1764496

End: 1766799

Strand: Direct

Name: ybiO [H]

Synonym: Bxe_A2861

Alternate gene names: 91782958

Gene position: 1764496-1766799 (Clockwise)

Preceding gene: 91782957

Following gene: 91782960

Centisome position: 36.04

GC content: 66.88

Gene sequence:

>2304_bases
GTGGCATCCGCGCCCTCGCCGGCGAGTCAGGCGGAACTGGCGCGTTCGCTCGACAGCGTGATCTCCACGCTCGACAACGA
CCGGCAACGCACCGCGCTCGTCGCCCAGCTCAAAAAACTGCGCGACGTCTCGCAGAACGTTGCGCCGGCCGCGCCCGTGC
AACCGAGCCCTGGCTTGCTCGGCGCGATCGCGTCCGGCATTGCGTCGTTCGAATCCGACGTGCATCAAGGGCGCACGCCG
GTCCGCTATTGGGGCGGACGCTTCAATGCCGCCGGCAACGAGCTCTACACGATCATTTCGGGGCAGGGGCACGAGAGCTT
CGGCCGCATTGTGTTCTCGATGATTGCGATGCTGGCGGGCTGGGGCGCGTGCGCCGGCGCGCTGATCTACGTGCAGCACC
GGTTGTACCGGCGCTTCGGCATCGTCATGGGGCTCAATCCGAACCCCACCACGCGCGAGTTGCTGATCTTCGCGCTGCGC
CGCGTCGGCCCGTGGATCATCGCCTTTCTCGCCGCGCTGCTGTTCGTGCGCGCCATGCCCGACGCGCTCGGCCGCACGCT
CGGCATGGTGGTTGCCTATGCGATCGTTGCGGGTGCGGTGTTCTCGGCGATCTGTCTGATCATGTTTTCGCTGTTCGGCT
CGGGGCATCGGCGGATCGCGGTGCGCCTGCTGATCGATCATGCGCGGCGCGTGCTGTTCGTGGTCGGCGTGTGCGGCGCG
CTCGGCGACGCCGCCGTCAATTACGACGTCGCGCATCAACTCGGGCCGAATCTCGCCGCATTGATTTCGACCGCGGCCAA
CATGACGGCCGCCGTCCTCACCGGCTACTTCGCGCTCGCGTTTCGCCGGCCGGTCGCGCATCTGATCCGCAACCGGCCCT
ACGAGCAGCGCACCACCCACAAGGCCGCGACCGACGCCTTCGACGTACTCGCCGCGCTGTGGCACGTGCCCGTGCTGGTG
CTCGCCACCGCGTCGGTGGTTGCCACGCTCGGCGGCTCGGGTTCGAGCGAAAACGTGCTGCAGATCTCGGTGGTGACCGC
GCTGCTGCTGGTGCTGGCCTTTTTCGTGTCGGCCATCGTGTTGCGCCTGACGCGTCCGCGCAGCGCGCGCACGCGGCGCC
GCTCGCCGTATCTGACGCGCCTGCTGCGTTTTTTCGGCACGCTGGTCACGCTGTTTGTCTGGCTGTTTTTCTTTGAACTC
GCGGCGCGTTTGTGGGGCGTCTCGCTCGCTGCGGTGGTCGAAGAAAACGTGGCGGCGCGCGGCATCGCGCATGCGGTGAC
GGCGATCATCGCCACCGTGTTCATTGCGTGGCTGCTGTGGATTCTGGTCGATACCGCGATCACGGAAGCGCTCAATCCGG
GGGGGCCGCGCAACAAGTCGCGCGCGCCGAGCATGCGCGCCCGCACCATGCTGCCGCTGTTGCGCAACGTGCTGCTCGTC
ACGATCATGACGATCGCCGGCATCGTGACGGCGGCCAATCTCGGCATCAATGTCACGCCGCTGCTGGCGGGCGCCGGCGT
GATCGGCCTCGCGATCGGCTTCGGCGCGCAGTCGCTCGTGACCGACCTGATCACGGGGCTGTTCATCATCATCGAAGACA
CGATTTCGGTGGGCGACTGGATCGACGTGGACGGCGGCCACGCGGGCACGGTCGAGCATCTGTCGATCCGCACGGTGCGG
CTGCGCGACGGGCAAGGCGCGATTCACGCGATTCCGTTCTCGCAGATCAAGATCGTCAAGAACCTGTCGCGCGATTTCGC
GTATGCGGTGTTCGAAGTGCGCATGTCGTTCTCCACCGACGTCGATGAGATCACGCAGTTGATCCGTGAGGTCGGCGCCG
ATCTGATGGCCGATTTCCGTTACCGGCGCGAGATGCTCGGACCGATCGAAGTGTGGGGACTGGACCGTTTCGATCCGAAC
TGGATGGTCGTGAAAGGACAGATCAAGACGCGGCCGCTGCAGCAATGGAGCGTGGCGCGCGCGTTCAATCTGCGTCTCAA
GCGCAAGATGGACGAAGCGGGCATCGAGATTCCGGTGCCGCAGATGCGTGTGTATACGTCGTCGAAGGATAGCGAAGGGC
AGCCTTTGCAGGACGACGAGATGTCGGGGTTGGGCCCGCGTGGGCATGCCGAGAGTCAGCCGGGGGCGTCGGCGTCCGCA
TCGGCGGCGCGGGCCGTGCATCCGCCGCTTGCGGTGGCGCGCGACGTGTCGCACGAACCGCGGCCGGCGCCGCCGCCGAC
CGGGCAGACAGCGCCGGTTCCACCGCAGATTCCTACGGCCGGCGAGGCGGGCGGGAAGACCTAG

Upstream 100 bases:

>100_bases
CACCGGCACGCCGGTTATTCCGGCCCTGCAGAGTCTGATCAACAGCGCGACGGTGACTGCGGCGCCGGCGTCTTCTGCTT
CAGGCGCATCGGCGGCGGAG

Downstream 100 bases:

>100_bases
CTGCGGGCATTGTGACCACAGTCGGCAACGCTCACCACGTCGTTGACGTGCGTCGCAATCTGCGCACCCGCCACGCCGTA
AATATGCAGCGAGACGGCAG

Product: small conductance mechanosensitive channel ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 767; Mature: 766

Protein sequence:

>767_residues
MASAPSPASQAELARSLDSVISTLDNDRQRTALVAQLKKLRDVSQNVAPAAPVQPSPGLLGAIASGIASFESDVHQGRTP
VRYWGGRFNAAGNELYTIISGQGHESFGRIVFSMIAMLAGWGACAGALIYVQHRLYRRFGIVMGLNPNPTTRELLIFALR
RVGPWIIAFLAALLFVRAMPDALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRVLFVVGVCGA
LGDAAVNYDVAHQLGPNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRTTHKAATDAFDVLAALWHVPVLV
LATASVVATLGGSGSSENVLQISVVTALLLVLAFFVSAIVLRLTRPRSARTRRRSPYLTRLLRFFGTLVTLFVWLFFFEL
AARLWGVSLAAVVEENVAARGIAHAVTAIIATVFIAWLLWILVDTAITEALNPGGPRNKSRAPSMRARTMLPLLRNVLLV
TIMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDWIDVDGGHAGTVEHLSIRTVR
LRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTDVDEITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPN
WMVVKGQIKTRPLQQWSVARAFNLRLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLQDDEMSGLGPRGHAESQPGASASA
SAARAVHPPLAVARDVSHEPRPAPPPTGQTAPVPPQIPTAGEAGGKT

Sequences:

>Translated_767_residues
MASAPSPASQAELARSLDSVISTLDNDRQRTALVAQLKKLRDVSQNVAPAAPVQPSPGLLGAIASGIASFESDVHQGRTP
VRYWGGRFNAAGNELYTIISGQGHESFGRIVFSMIAMLAGWGACAGALIYVQHRLYRRFGIVMGLNPNPTTRELLIFALR
RVGPWIIAFLAALLFVRAMPDALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRVLFVVGVCGA
LGDAAVNYDVAHQLGPNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRTTHKAATDAFDVLAALWHVPVLV
LATASVVATLGGSGSSENVLQISVVTALLLVLAFFVSAIVLRLTRPRSARTRRRSPYLTRLLRFFGTLVTLFVWLFFFEL
AARLWGVSLAAVVEENVAARGIAHAVTAIIATVFIAWLLWILVDTAITEALNPGGPRNKSRAPSMRARTMLPLLRNVLLV
TIMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDWIDVDGGHAGTVEHLSIRTVR
LRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTDVDEITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPN
WMVVKGQIKTRPLQQWSVARAFNLRLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLQDDEMSGLGPRGHAESQPGASASA
SAARAVHPPLAVARDVSHEPRPAPPPTGQTAPVPPQIPTAGEAGGKT
>Mature_766_residues
ASAPSPASQAELARSLDSVISTLDNDRQRTALVAQLKKLRDVSQNVAPAAPVQPSPGLLGAIASGIASFESDVHQGRTPV
RYWGGRFNAAGNELYTIISGQGHESFGRIVFSMIAMLAGWGACAGALIYVQHRLYRRFGIVMGLNPNPTTRELLIFALRR
VGPWIIAFLAALLFVRAMPDALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRVLFVVGVCGAL
GDAAVNYDVAHQLGPNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRTTHKAATDAFDVLAALWHVPVLVL
ATASVVATLGGSGSSENVLQISVVTALLLVLAFFVSAIVLRLTRPRSARTRRRSPYLTRLLRFFGTLVTLFVWLFFFELA
ARLWGVSLAAVVEENVAARGIAHAVTAIIATVFIAWLLWILVDTAITEALNPGGPRNKSRAPSMRARTMLPLLRNVLLVT
IMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDWIDVDGGHAGTVEHLSIRTVRL
RDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTDVDEITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPNW
MVVKGQIKTRPLQQWSVARAFNLRLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLQDDEMSGLGPRGHAESQPGASASAS
AARAVHPPLAVARDVSHEPRPAPPPTGQTAPVPPQIPTAGEAGGKT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=737, Percent_Identity=27.1370420624152, Blast_Score=141, Evalue=2e-34,
Organism=Escherichia coli, GI1789291, Length=198, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 82529; Mature: 82398

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAPSPASQAELARSLDSVISTLDNDRQRTALVAQLKKLRDVSQNVAPAAPVQPSPGLL
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
GAIASGIASFESDVHQGRTPVRYWGGRFNAAGNELYTIISGQGHESFGRIVFSMIAMLAG
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC
WGACAGALIYVQHRLYRRFGIVMGLNPNPTTRELLIFALRRVGPWIIAFLAALLFVRAMP
CHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
DALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRVLFVVGVCGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGDAAVNYDVAHQLGPNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRTTH
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KAATDAFDVLAALWHVPVLVLATASVVATLGGSGSSENVLQISVVTALLLVLAFFVSAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
LRLTRPRSARTRRRSPYLTRLLRFFGTLVTLFVWLFFFELAARLWGVSLAAVVEENVAAR
HHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAHAVTAIIATVFIAWLLWILVDTAITEALNPGGPRNKSRAPSMRARTMLPLLRNVLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TIMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDW
HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCE
IDVDGGHAGTVEHLSIRTVRLRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTD
EECCCCCCCCEEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDEITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
AFNLRLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLQDDEMSGLGPRGHAESQPGASASA
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SAARAVHPPLAVARDVSHEPRPAPPPTGQTAPVPPQIPTAGEAGGKT
HHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASAPSPASQAELARSLDSVISTLDNDRQRTALVAQLKKLRDVSQNVAPAAPVQPSPGLL
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
GAIASGIASFESDVHQGRTPVRYWGGRFNAAGNELYTIISGQGHESFGRIVFSMIAMLAG
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC
WGACAGALIYVQHRLYRRFGIVMGLNPNPTTRELLIFALRRVGPWIIAFLAALLFVRAMP
CHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
DALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRVLFVVGVCGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGDAAVNYDVAHQLGPNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRTTH
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KAATDAFDVLAALWHVPVLVLATASVVATLGGSGSSENVLQISVVTALLLVLAFFVSAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
LRLTRPRSARTRRRSPYLTRLLRFFGTLVTLFVWLFFFELAARLWGVSLAAVVEENVAAR
HHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAHAVTAIIATVFIAWLLWILVDTAITEALNPGGPRNKSRAPSMRARTMLPLLRNVLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TIMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDW
HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCE
IDVDGGHAGTVEHLSIRTVRLRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTD
EECCCCCCCCEEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDEITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
AFNLRLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLQDDEMSGLGPRGHAESQPGASASA
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SAARAVHPPLAVARDVSHEPRPAPPPTGQTAPVPPQIPTAGEAGGKT
HHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]