| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is bphB [H]
Identifier: 91782952
GI number: 91782952
Start: 1759155
End: 1760930
Strand: Direct
Name: bphB [H]
Synonym: Bxe_A2867
Alternate gene names: 91782952
Gene position: 1759155-1760930 (Clockwise)
Preceding gene: 91782946
Following gene: 91782955
Centisome position: 35.93
GC content: 68.3
Gene sequence:
>1776_bases ATGAGACTGACCACCAAAGGCCTGTTGCTGATCGCGATTCCGGCCGTCTTCGAACTGGCGCTGTTGTCCGGGCTGGTCAA GGCTGAGTCGGACGCGGCGCAGGCGGAGCGCTGGGCCATCCATAGCCAGGACGTGCTGCGTCAGACCACCGCGATTCTCG ATCCGGTGCTGGGCGAGTCCGTGGCGCTGCGCGGGGCGGTGCTCGCCAACGACGCCCATTTCGCCACGCCGGTAACGGTG TGGATGGACGTCGACCGGCGCATCGACCAACTGGCCGATCTGGTCGCCGACAATCCGGCGCAGGTCGAACGCGTGGTTCA GGTGCGCCAGGCGGTGCAGGCCTACCGGCAATGGTCGGACCGCGTTCAGGACATGCTGCGTTCTGGCCGGCGGCGCGACG TGCTCGCGCGCTTTCGCGACCTCGCACCCACCGACGTGCTCGACCGGTTTCGTCAGCAACTCGCCGCGTTTCAAGCCGAG GAGCGGCGTCTCGACACGCTGCGTTCGAATGCCGCAGACGCCGCGCGCGAGCGGCAGCAGACCCTGGTGGTCGCGGCCGT GCTCGGCTCGCTGCTGTTCGTCGCGCTGGCCGTCTGGTTATTCACCCGCGGCGTGCGCGGCCGGCTCGCGCTCCTTGCCG ACAACGCCGGGCGCCTCGCGGGCAACGAACCGCTGGCGCCGATCGGCTCCGGACGCGATGAAATCGCCCGCCTCGATCTG ACCTTGCACGAGACGAGCCGTCGCCTGCTCGAAGCCGAGCGCATCCAGGCGCGCTTCCAGGCCGATCTGGCGCGCCGCAC GGGGGAACTCGCGCGCATCAACGAGACCTTGCGTCAGCAGACTCAGGAAAACGAGATGTTCATTTACAGCGTGTCGCATG ATCTGCGTGCGCCGCTGGTGAACCTGCAGGGCTTCTCGAAGGAACTGATCCGCGCGTGCGACGAACTGCGCGTGGCGGTG CGCGAGTCGTCGCTCGCGGCCGGCACGCGGCAGCGCATCGAACGGGTGGTCGACGAGGATATCGGCGAAGCGCTGCACTA TCTGCAAACGGCGGTGCTGCGCGCGTCGCACATCATCGACGCGCTGTTGCGGCTGTCGCGCGTGGGCCGGGTGGAATACC GCCAGCAGAAGGTCGAGGTGCGCGATATCGTGCCGCGCGTGATCGACGCGATGCAAGGCTCGATCCGGGCGCGGCGCGCT CACGTCCACGTGGACGAACTGCCCGCGGTATGGGGCGACCCGACCGCGCTGGAACAGGTGTTCGCGAACCTGATCGGCAA TGCGGTGAATTACCTGGATCCGTCACGGGAGGGCAGGATCGAGATCGGCACGACGCCGGCGCCGCCGGGCGTGCATTCGC TAAGGATCTTCTATGTGAGGGACAACGGCCTGGGCATTCCTGCGGTTGCCTTGCCGCGGCTATTCAACGCCTTTCAGCGG TTGCACGGCAATGTGGCGGCCGGCGAGGGCATCGGCCTCGCGCTCGTGCGCCGCGTGGTGGAGCGGCACGGCGGGCGCGT GTGGGCGGAGTCGAAAGAAGGCGTGGGCACGACGTTCTATCTGTCGCTGCCTGAAGCCAACGCACGGATCGCGCAACTGG CTGCCGGCACGCAAGGACCGCCGACGGCGCCCGGTGTCCAGGCCGCTCGCGATGCCCGCCCGGCCCTGGAGGACCGCGAG CGGAAGAGCGGCAGCGGCAGCAATAGTGGCAGCAGCAATAGCGGTAGCGCAGCCACGCACGCCGCCGATGCCAAGCCCGG CATCAGTACGCCTTAG
Upstream 100 bases:
>100_bases CTGGTCAATGGCGTGCCCTCTTTGTTTTCCTGTGCAATCGCCGACATAATGTGCCGTCCCCGAGCATGATCTGCCGGCCA CCGACCTCCAGTGCGCACGC
Downstream 100 bases:
>100_bases CCAGGTTACGACGTGGTAAAGAGACGGCGCGGTTTGAGCAACTGGCTGCCGCGAATCGACCAGTAGCAGCCGCAAGCGAT GAGTACGGCAATACCCGCCA
Product: Signal transduction histidine Kinases (STHK)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRLTTKGLLLIAIPAVFELALLSGLVKAESDAAQAERWAIHSQDVLRQTTAILDPVLGESVALRGAVLANDAHFATPVTV WMDVDRRIDQLADLVADNPAQVERVVQVRQAVQAYRQWSDRVQDMLRSGRRRDVLARFRDLAPTDVLDRFRQQLAAFQAE ERRLDTLRSNAADAARERQQTLVVAAVLGSLLFVALAVWLFTRGVRGRLALLADNAGRLAGNEPLAPIGSGRDEIARLDL TLHETSRRLLEAERIQARFQADLARRTGELARINETLRQQTQENEMFIYSVSHDLRAPLVNLQGFSKELIRACDELRVAV RESSLAAGTRQRIERVVDEDIGEALHYLQTAVLRASHIIDALLRLSRVGRVEYRQQKVEVRDIVPRVIDAMQGSIRARRA HVHVDELPAVWGDPTALEQVFANLIGNAVNYLDPSREGRIEIGTTPAPPGVHSLRIFYVRDNGLGIPAVALPRLFNAFQR LHGNVAAGEGIGLALVRRVVERHGGRVWAESKEGVGTTFYLSLPEANARIAQLAAGTQGPPTAPGVQAARDARPALEDRE RKSGSGSNSGSSNSGSAATHAADAKPGISTP
Sequences:
>Translated_591_residues MRLTTKGLLLIAIPAVFELALLSGLVKAESDAAQAERWAIHSQDVLRQTTAILDPVLGESVALRGAVLANDAHFATPVTV WMDVDRRIDQLADLVADNPAQVERVVQVRQAVQAYRQWSDRVQDMLRSGRRRDVLARFRDLAPTDVLDRFRQQLAAFQAE ERRLDTLRSNAADAARERQQTLVVAAVLGSLLFVALAVWLFTRGVRGRLALLADNAGRLAGNEPLAPIGSGRDEIARLDL TLHETSRRLLEAERIQARFQADLARRTGELARINETLRQQTQENEMFIYSVSHDLRAPLVNLQGFSKELIRACDELRVAV RESSLAAGTRQRIERVVDEDIGEALHYLQTAVLRASHIIDALLRLSRVGRVEYRQQKVEVRDIVPRVIDAMQGSIRARRA HVHVDELPAVWGDPTALEQVFANLIGNAVNYLDPSREGRIEIGTTPAPPGVHSLRIFYVRDNGLGIPAVALPRLFNAFQR LHGNVAAGEGIGLALVRRVVERHGGRVWAESKEGVGTTFYLSLPEANARIAQLAAGTQGPPTAPGVQAARDARPALEDRE RKSGSGSNSGSSNSGSAATHAADAKPGISTP >Mature_591_residues MRLTTKGLLLIAIPAVFELALLSGLVKAESDAAQAERWAIHSQDVLRQTTAILDPVLGESVALRGAVLANDAHFATPVTV WMDVDRRIDQLADLVADNPAQVERVVQVRQAVQAYRQWSDRVQDMLRSGRRRDVLARFRDLAPTDVLDRFRQQLAAFQAE ERRLDTLRSNAADAARERQQTLVVAAVLGSLLFVALAVWLFTRGVRGRLALLADNAGRLAGNEPLAPIGSGRDEIARLDL TLHETSRRLLEAERIQARFQADLARRTGELARINETLRQQTQENEMFIYSVSHDLRAPLVNLQGFSKELIRACDELRVAV RESSLAAGTRQRIERVVDEDIGEALHYLQTAVLRASHIIDALLRLSRVGRVEYRQQKVEVRDIVPRVIDAMQGSIRARRA HVHVDELPAVWGDPTALEQVFANLIGNAVNYLDPSREGRIEIGTTPAPPGVHSLRIFYVRDNGLGIPAVALPRLFNAFQR LHGNVAAGEGIGLALVRRVVERHGGRVWAESKEGVGTTFYLSLPEANARIAQLAAGTQGPPTAPGVQAARDARPALEDRE RKSGSGSNSGSSNSGSAATHAADAKPGISTP
Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]
COG id: COG4251
COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=278, Percent_Identity=29.136690647482, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=247, Percent_Identity=29.5546558704453, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=27.4261603375527, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789149, Length=288, Percent_Identity=25.6944444444444, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=250, Percent_Identity=28, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788713, Length=266, Percent_Identity=25.5639097744361, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788393, Length=280, Percent_Identity=26.0714285714286, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR013654 - InterPro: IPR016132 - InterPro: IPR001294 - InterPro: IPR013515 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64772; Mature: 64772
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTTKGLLLIAIPAVFELALLSGLVKAESDAAQAERWAIHSQDVLRQTTAILDPVLGES CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VALRGAVLANDAHFATPVTVWMDVDRRIDQLADLVADNPAQVERVVQVRQAVQAYRQWSD HHHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RVQDMLRSGRRRDVLARFRDLAPTDVLDRFRQQLAAFQAEERRLDTLRSNAADAARERQQ HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVVAAVLGSLLFVALAVWLFTRGVRGRLALLADNAGRLAGNEPLAPIGSGRDEIARLDL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH TLHETSRRLLEAERIQARFQADLARRTGELARINETLRQQTQENEMFIYSVSHDLRAPLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH NLQGFSKELIRACDELRVAVRESSLAAGTRQRIERVVDEDIGEALHYLQTAVLRASHIID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLRLSRVGRVEYRQQKVEVRDIVPRVIDAMQGSIRARRAHVHVDELPAVWGDPTALEQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHH FANLIGNAVNYLDPSREGRIEIGTTPAPPGVHSLRIFYVRDNGLGIPAVALPRLFNAFQR HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH LHGNVAAGEGIGLALVRRVVERHGGRVWAESKEGVGTTFYLSLPEANARIAQLAAGTQGP HCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCC PTAPGVQAARDARPALEDRERKSGSGSNSGSSNSGSAATHAADAKPGISTP CCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLTTKGLLLIAIPAVFELALLSGLVKAESDAAQAERWAIHSQDVLRQTTAILDPVLGES CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VALRGAVLANDAHFATPVTVWMDVDRRIDQLADLVADNPAQVERVVQVRQAVQAYRQWSD HHHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RVQDMLRSGRRRDVLARFRDLAPTDVLDRFRQQLAAFQAEERRLDTLRSNAADAARERQQ HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVVAAVLGSLLFVALAVWLFTRGVRGRLALLADNAGRLAGNEPLAPIGSGRDEIARLDL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH TLHETSRRLLEAERIQARFQADLARRTGELARINETLRQQTQENEMFIYSVSHDLRAPLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH NLQGFSKELIRACDELRVAVRESSLAAGTRQRIERVVDEDIGEALHYLQTAVLRASHIID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLRLSRVGRVEYRQQKVEVRDIVPRVIDAMQGSIRARRAHVHVDELPAVWGDPTALEQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHH FANLIGNAVNYLDPSREGRIEIGTTPAPPGVHSLRIFYVRDNGLGIPAVALPRLFNAFQR HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH LHGNVAAGEGIGLALVRRVVERHGGRVWAESKEGVGTTFYLSLPEANARIAQLAAGTQGP HCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCC PTAPGVQAARDARPALEDRERKSGSGSNSGSSNSGSAATHAADAKPGISTP CCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]