| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is astE
Identifier: 91782904
GI number: 91782904
Start: 1700008
End: 1701036
Strand: Direct
Name: astE
Synonym: Bxe_A2918
Alternate gene names: 91782904
Gene position: 1700008-1701036 (Clockwise)
Preceding gene: 91782903
Following gene: 91782905
Centisome position: 34.72
GC content: 65.89
Gene sequence:
>1029_bases ATGCCGGTTTCGCTGCTCGACGATTTCCTCGCTTATACGCTGGCCGGTACGCGGCCGGCCGCGAGCGAAGCACAGGGCAC GTGTGCCGGCGGCGTGCGCTGGTCGTGGCTGGACGACGGCGTATTGCTGATGGAACCGGCTGTGCAGGAAGAGGGCATGC GCAGTGTGCTCGTCTCCGCCGGCGTGCATGGCGACGAAACCGCGCCGATCGAACTGCTCGCGTTTCTCGTGCGCGACATC GCGCATGGCACCGCGGCGTTGACCGGCCGCCTGCTGGTGATTCTCGGCAACGTCGACGCAATGCGCGACGCGTGCCGTTA TCGCGACGACGATCTGAACCGGCTTTTCAGCGGCCGTCATCTGCAACTGCCGCAGAGCCACGAGGCGCCGCGTGCGGCGG CGCTGGAACGGGCCGCCACGCGGTTTTTCGCGGCGGCGCCAGACAATCCCGGCGCGCGCTGGCATATCGACATGCACACG GCCATCCGCGCGTCCGCCTTCGAGCAGTTCGCGTTACTGCCGCACACCGGCAAGCCGTTTTCGCGTGCGATGTTCGAGTG GCTCGGCGAGGCGCGCATCAGTGCGGTGCTGTTGCACACCACCAGGGGCAACACGTATTCGCATTTCACCGCGCAGGCAT GTGGCGCGCTGGCTTGCACGCTGGAACTCGGCAAGGTGCGTCCGTTCGGGCAGAACGATCTGACGCGTTTCGCCGGCGCC GATCATGCGGTGCGGCACCTGCTGGCCGGCATGCGCGGCGAGGTGCGCGCGCCTATGCCGAGGGCGTTTACGGTAATCGA CCAGATCACCAGGCAGAGCGAAGCATTCGAATTGCTGGTCGCGCCCGATGTCGCGAATTTCACGCCGTTCGCAAAAGACA CGGTGCTCGCACGCGATGGCGACTATCGCTATGTCGTGCGTCACGACGAGGAGCGTCTCGTGTTTCCGAACGCGACGGTC AAGCCCGGTTTGCGCGCCGGCCTGATGGTCATCGAAACGACGCAGGACACGCTCTCGAAGCTCGTGTAG
Upstream 100 bases:
>100_bases ACCGACCCGCATCTGCTCGCCGAGTCGCGCACCGCGCTCGACGAACTGACGCAGATTCTCGGCCTGGGCTCGCTGTATGA CTTCCAGCGCTGAGGGCAGC
Downstream 100 bases:
>100_bases TCCACGCAGGAACCCGCGACCGTGCGCGCGGGTTTGCCTGAACGCGACATTTATTTACACCTTCCCACCTACGGCTCACG GCGCTCGCTCCACGACGCGC
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPVSLLDDFLAYTLAGTRPAASEAQGTCAGGVRWSWLDDGVLLMEPAVQEEGMRSVLVSAGVHGDETAPIELLAFLVRDI AHGTAALTGRLLVILGNVDAMRDACRYRDDDLNRLFSGRHLQLPQSHEAPRAAALERAATRFFAAAPDNPGARWHIDMHT AIRASAFEQFALLPHTGKPFSRAMFEWLGEARISAVLLHTTRGNTYSHFTAQACGALACTLELGKVRPFGQNDLTRFAGA DHAVRHLLAGMRGEVRAPMPRAFTVIDQITRQSEAFELLVAPDVANFTPFAKDTVLARDGDYRYVVRHDEERLVFPNATV KPGLRAGLMVIETTQDTLSKLV
Sequences:
>Translated_342_residues MPVSLLDDFLAYTLAGTRPAASEAQGTCAGGVRWSWLDDGVLLMEPAVQEEGMRSVLVSAGVHGDETAPIELLAFLVRDI AHGTAALTGRLLVILGNVDAMRDACRYRDDDLNRLFSGRHLQLPQSHEAPRAAALERAATRFFAAAPDNPGARWHIDMHT AIRASAFEQFALLPHTGKPFSRAMFEWLGEARISAVLLHTTRGNTYSHFTAQACGALACTLELGKVRPFGQNDLTRFAGA DHAVRHLLAGMRGEVRAPMPRAFTVIDQITRQSEAFELLVAPDVANFTPFAKDTVLARDGDYRYVVRHDEERLVFPNATV KPGLRAGLMVIETTQDTLSKLV >Mature_341_residues PVSLLDDFLAYTLAGTRPAASEAQGTCAGGVRWSWLDDGVLLMEPAVQEEGMRSVLVSAGVHGDETAPIELLAFLVRDIA HGTAALTGRLLVILGNVDAMRDACRYRDDDLNRLFSGRHLQLPQSHEAPRAAALERAATRFFAAAPDNPGARWHIDMHTA IRASAFEQFALLPHTGKPFSRAMFEWLGEARISAVLLHTTRGNTYSHFTAQACGALACTLELGKVRPFGQNDLTRFAGAD HAVRHLLAGMRGEVRAPMPRAFTVIDQITRQSEAFELLVAPDVANFTPFAKDTVLARDGDYRYVVRHDEERLVFPNATVK PGLRAGLMVIETTQDTLSKLV
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
Homologues:
Organism=Escherichia coli, GI1788040, Length=326, Percent_Identity=46.6257668711656, Blast_Score=284, Evalue=5e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASTE_BURXL (Q141D1)
Other databases:
- EMBL: CP000270 - RefSeq: YP_558110.1 - ProteinModelPortal: Q141D1 - SMR: Q141D1 - GeneID: 4004451 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A2918 - HOGENOM: HBG298271 - OMA: RWRWLGH - ProtClustDB: PRK05324 - HAMAP: MF_00767 - InterPro: IPR007036 - InterPro: IPR016681 - PIRSF: PIRSF017020 - TIGRFAMs: TIGR03242
Pfam domain/function: PF04952 AstE_AspA
EC number: =3.5.1.96
Molecular weight: Translated: 37411; Mature: 37280
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00024 HEMOPEXIN
Important sites: ACT_SITE 222-222
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSLLDDFLAYTLAGTRPAASEAQGTCAGGVRWSWLDDGVLLMEPAVQEEGMRSVLVSA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHC GVHGDETAPIELLAFLVRDIAHGTAALTGRLLVILGNVDAMRDACRYRDDDLNRLFSGRH CCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEEECCCHHHHHHHHCCCCHHHHHHCCCC LQLPQSHEAPRAAALERAATRFFAAAPDNPGARWHIDMHTAIRASAFEQFALLPHTGKPF CCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCHH SRAMFEWLGEARISAVLLHTTRGNTYSHFTAQACGALACTLELGKVRPFGQNDLTRFAGA HHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCC DHAVRHLLAGMRGEVRAPMPRAFTVIDQITRQSEAFELLVAPDVANFTPFAKDTVLARDG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECC DYRYVVRHDEERLVFPNATVKPGLRAGLMVIETTQDTLSKLV CEEEEEEECCCEEECCCCCCCCCCHHCEEEEEECHHHHHHCC >Mature Secondary Structure PVSLLDDFLAYTLAGTRPAASEAQGTCAGGVRWSWLDDGVLLMEPAVQEEGMRSVLVSA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHC GVHGDETAPIELLAFLVRDIAHGTAALTGRLLVILGNVDAMRDACRYRDDDLNRLFSGRH CCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEEECCCHHHHHHHHCCCCHHHHHHCCCC LQLPQSHEAPRAAALERAATRFFAAAPDNPGARWHIDMHTAIRASAFEQFALLPHTGKPF CCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCHH SRAMFEWLGEARISAVLLHTTRGNTYSHFTAQACGALACTLELGKVRPFGQNDLTRFAGA HHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCC DHAVRHLLAGMRGEVRAPMPRAFTVIDQITRQSEAFELLVAPDVANFTPFAKDTVLARDG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECC DYRYVVRHDEERLVFPNATVKPGLRAGLMVIETTQDTLSKLV CEEEEEEECCCEEECCCCCCCCCCHHCEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA