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The map label for this gene is glxA [H]

Identifier: 91782898

GI number: 91782898

Start: 1692659

End: 1693708

Strand: Direct

Name: glxA [H]

Synonym: Bxe_A2924

Alternate gene names: 91782898

Gene position: 1692659-1693708 (Clockwise)

Preceding gene: 91782897

Following gene: 91782899

Centisome position: 34.57

GC content: 66.1

Gene sequence:

>1050_bases
ATGGCCCGCACGTCCAGCCCGGCTCGCACCACGCAAGTCGCCATTGTCGCCTTGCCGCCCGTGTCGATGTCGGGCGTCGG
GCCGATTGTCGACGCGCTCAATCTCGCCAACGAAATTGACGGCCGCGCGCTGTACCGGGTGCAGGTATGCTCGTGGGACG
GTCGCGCGGTGCCGCTTGCGGGCGGCGCGCACTGGTCCGCCGACGCCGCCTTCGGCGACGCGATCGCGTGCGACTGGCTG
ATCATCGTCAGCGAGCGGTTCCAGCAGTTCGCCGACTATCGCCTCTTTCTCGCCAGCCTGTCGCGCGTCGGGCAGCGCAC
GCCGCTCGTCACCGGGATTCATCACGGTGTCTGGTGGCTCGCTATGGCCGGGCAGTTGTCCGGCTATCGCGTGAGCGTCA
ACTGGGAAACCTATCAGCAGTTCTCCGAGCAGTTCGAACGCTCCATCGTCACGCAACAGATCTTCGAAATCGACCGCGAT
CGCGCGACCTGCGCGGGCGGCCAGGCAACCGTCGACTTCATGCTGGCGATGATCGGCCGCGAGCATGGTCCCGAACTCGC
GGATCGCATTGCCGATACGCTCGGCGTGGGTGTGTTGCGCGCGGGCGAAGAGCGTCAGCGTATTCCGTTCGTGACCGCGC
CGGGCGAACGCCACCCGCGTCTGAACGACGCGTTGCTGCTGATGGAAGCCAATATCGAGGATCCGCTCACCACCGATGAG
ATCGCGGGTCTGGTCGGCGTGTCGCGGCGGCAGTTGGAACGCCTGTTTCGCCAGTATCTCGGCTCGATGCCGTCCAAATA
CTACCTGGGGCTGCGGCTTTCCAAAGCGCGCACGCAATTGCAGCGCACCAGCAAATCGGTGGTGCAGATCAGTCTGGCTT
GCGGGTTTTCGTCGGCGGCGCACTTTTCGAATGCGTACCGCGAACGCTTTGGTGTCACACCGCGCGAGGATCGTCGTAAC
TGGATCGACAGGCAGACCGGCGCGGGCGGCGCCGCGGCCAGCGAGCCGCGGCCGGCCGCGTTGATCGAGCGGCCGGATCA
GGCGGACTGA

Upstream 100 bases:

>100_bases
GAGGTCCTGAGCGCGCCGCGCAGCGAACGGCTCAAGCAGTTCCTGTCCGGCAGCCTGAAGTAACGCGCGGCTCGCGCCGC
AGCGTTTGATCCCGTCAGCG

Downstream 100 bases:

>100_bases
AGCGTTGCCGTTCGCGTGGAACCTCATAGAAAGCGTCGCGTATGCGCAAGACGTATTGCGCGCCGTTACCTACACTAGCT
GTATCACCTCTCACCTGTAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLAGGAHWSADAAFGDAIACDWL
IIVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRD
RATCAGGQATVDFMLAMIGREHGPELADRIADTLGVGVLRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDE
IAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAAHFSNAYRERFGVTPREDRRN
WIDRQTGAGGAAASEPRPAALIERPDQAD

Sequences:

>Translated_349_residues
MARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLAGGAHWSADAAFGDAIACDWL
IIVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRD
RATCAGGQATVDFMLAMIGREHGPELADRIADTLGVGVLRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDE
IAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAAHFSNAYRERFGVTPREDRRN
WIDRQTGAGGAAASEPRPAALIERPDQAD
>Mature_348_residues
ARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLAGGAHWSADAAFGDAIACDWLI
IVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWLAMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRDR
ATCAGGQATVDFMLAMIGREHGPELADRIADTLGVGVLRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDEI
AGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAAHFSNAYRERFGVTPREDRRNW
IDRQTGAGGAAASEPRPAALIERPDQAD

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=100, Percent_Identity=38, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790857, Length=100, Percent_Identity=31, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38473; Mature: 38342

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLA
CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEC
GGAHWSADAAFGDAIACDWLIIVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRDRATCAGGQATVDFMLAMIGR
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCC
EHGPELADRIADTLGVGVLRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCHHH
IAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHEEEEECCCCCHHH
HFSNAYRERFGVTPREDRRNWIDRQTGAGGAAASEPRPAALIERPDQAD
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
ARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLA
CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEC
GGAHWSADAAFGDAIACDWLIIVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRDRATCAGGQATVDFMLAMIGR
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCC
EHGPELADRIADTLGVGVLRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCHHH
IAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHEEEEECCCCCHHH
HFSNAYRERFGVTPREDRRNWIDRQTGAGGAAASEPRPAALIERPDQAD
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]